Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:04:23 (3841617): wrapper (7.7.26015): starting
15:04:23 (3841617): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 15:04:23] Arguments: --nthreads 10
[2025-10-12 15:04:23] Threads: 10
[2025-10-12 15:04:23] Checking for CVMFS
[2025-10-12 15:04:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:04:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:04:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:04:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:04:24] 2.13.2.0 2935877 124345 590612 151633 0 451 31466730 40960000 56559 16776704 0 576596884 99.770 351901020 17515 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:04:24] CVMFS is ok
[2025-10-12 15:04:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:04:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:04:24] Further information can be found at the LHC@home message board.
[2025-10-12 15:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:04:24] Checking for apptainer binary...
[2025-10-12 15:04:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:04:24] Running /usr/bin/apptainer --version
[2025-10-12 15:04:24] apptainer version 1.4.3-1.el9
[2025-10-12 15:04:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:04:24] c7-2-17.aglt2.org
[2025-10-12 15:04:24] apptainer works
[2025-10-12 15:04:24] Set ATHENA_PROC_NUMBER=10
[2025-10-12 15:04:24] Set ATHENA_CORE_NUMBER=10
[2025-10-12 15:04:24] Starting ATLAS job with PandaID=6840225672
[2025-10-12 15:04:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:45:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:45:07] 2025-10-12 21:43:54,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:45:07] 2025-10-12 21:43:54,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:45:07] 2025-10-12 21:43:54,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:45:07] 2025-10-12 21:43:54,903 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:45:07] 2025-10-12 21:43:54,903 | INFO     | sum of square deviations: 1177153052.974362
[2025-10-12 17:45:07] 2025-10-12 21:43:54,904 | INFO     | sum of deviations: 11946652124.076927
[2025-10-12 17:45:07] 2025-10-12 21:43:54,904 | INFO     | mean x: 1760300648.5128205
[2025-10-12 17:45:07] 2025-10-12 21:43:54,904 | INFO     | mean y: 2509195.2115384615
[2025-10-12 17:45:07] 2025-10-12 21:43:54,904 | INFO     | -- intersect: -17862372035.341324
[2025-10-12 17:45:07] 2025-10-12 21:43:54,904 | INFO     | intersect: -17862372035.341324
[2025-10-12 17:45:07] 2025-10-12 21:43:54,912 | INFO     | chi2: 2.075335055171961
[2025-10-12 17:45:07] 2025-10-12 21:43:54,912 | INFO     | sum of square deviations: 1067551607.9735115
[2025-10-12 17:45:07] 2025-10-12 21:43:54,912 | INFO     | sum of deviations: 21501449863.927143
[2025-10-12 17:45:07] 2025-10-12 21:43:54,913 | INFO     | mean x: 1760300496.013245
[2025-10-12 17:45:07] 2025-10-12 21:43:54,913 | INFO     | mean y: 2522126.536423841
[2025-10-12 17:45:07] 2025-10-12 21:43:54,913 | INFO     | -- intersect: -35451513610.7354
[2025-10-12 17:45:07] 2025-10-12 21:43:54,913 | INFO     | intersect: -35451513610.7354
[2025-10-12 17:45:07] 2025-10-12 21:43:54,913 | INFO     | chi2: 1.3708486966716213
[2025-10-12 17:45:07] 2025-10-12 21:43:54,913 | INFO     | current chi2=1.3708486966716213 (change=33.9456685196293 %)
[2025-10-12 17:45:07] 2025-10-12 21:43:54,913 | INFO     | sum of square deviations: 964973550.4726006
[2025-10-12 17:45:07] 2025-10-12 21:43:54,914 | INFO     | sum of deviations: 20733809696.568497
[2025-10-12 17:45:07] 2025-10-12 21:43:54,914 | INFO     | mean x: 1760300343.5136986
[2025-10-12 17:45:07] 2025-10-12 21:43:54,914 | INFO     | mean y: 2520983.9657534244
[2025-10-12 17:45:07] 2025-10-12 21:43:54,914 | INFO     | -- intersect: -37819999968.388054
[2025-10-12 17:45:07] 2025-10-12 21:43:54,914 | INFO     | intersect: -37819999968.388054
[2025-10-12 17:45:07] 2025-10-12 21:43:54,914 | INFO     | chi2: 1.3720653287514872
[2025-10-12 17:45:07] 2025-10-12 21:43:54,914 | INFO     | current chi2=1.3720653287514872 (change=-0.08875028169190607 %)
[2025-10-12 17:45:07] 2025-10-12 21:43:54,914 | INFO     | right removable region: 145
[2025-10-12 17:45:07] 2025-10-12 21:43:54,914 | INFO     | sum of square deviations: 1067550387.9735115
[2025-10-12 17:45:07] 2025-10-12 21:43:54,938 | INFO     | sum of deviations: -10135197062.682117
[2025-10-12 17:45:07] 2025-10-12 21:43:54,945 | INFO     | mean x: 1760300801.013245
[2025-10-12 17:45:07] 2025-10-12 21:43:54,945 | INFO     | mean y: 2539455.841059603
[2025-10-12 17:45:07] 2025-10-12 21:43:54,946 | INFO     | -- intersect: 16714626968.38768
[2025-10-12 17:45:07] 2025-10-12 21:43:54,946 | INFO     | intersect: 16714626968.38768
[2025-10-12 17:45:07] 2025-10-12 21:43:54,946 | INFO     | chi2: 0.7671935505018785
[2025-10-12 17:45:07] 2025-10-12 21:43:54,946 | INFO     | current chi2=0.7671935505018785 (change=63.0327860270105 %)
[2025-10-12 17:45:07] 2025-10-12 21:43:54,946 | INFO     | sum of square deviations: 964971110.4726006
[2025-10-12 17:45:07] 2025-10-12 21:43:54,947 | INFO     | sum of deviations: -11141385488.58904
[2025-10-12 17:45:07] 2025-10-12 21:43:54,947 | INFO     | mean x: 1760300953.5136986
[2025-10-12 17:45:07] 2025-10-12 21:43:54,947 | INFO     | mean y: 2540865.794520548
[2025-10-12 17:45:07] 2025-10-12 21:43:54,947 | INFO     | -- intersect: 20326663822.61732
[2025-10-12 17:45:07] 2025-10-12 21:43:54,947 | INFO     | intersect: 20326663822.61732
[2025-10-12 17:45:07] 2025-10-12 21:43:54,947 | INFO     | chi2: 0.7452963197611772
[2025-10-12 17:45:07] 2025-10-12 21:43:54,947 | INFO     | current chi2=0.7452963197611772 (change=2.8541990122801173 %)
[2025-10-12 17:45:07] 2025-10-12 21:43:54,947 | INFO     | left removable region: 20
[2025-10-12 17:45:07] 2025-10-12 21:43:54,947 | INFO     | sum of square deviations: 605595678.9920013
[2025-10-12 17:45:07] 2025-10-12 21:43:54,948 | INFO     | sum of deviations: 1615010126.6719995
[2025-10-12 17:45:07] 2025-10-12 21:43:54,949 | INFO     | mean x: 1760300923.008
[2025-10-12 17:45:07] 2025-10-12 21:43:54,949 | INFO     | mean y: 2549834.328
[2025-10-12 17:45:07] 2025-10-12 21:43:54,950 | INFO     | -- intersect: -4691842670.88262
[2025-10-12 17:45:07] 2025-10-12 21:43:54,950 | INFO     | intersect: -4691842670.88262
[2025-10-12 17:45:07] 2025-10-12 21:43:54,950 | INFO     | chi2: 0.009474002928138037
[2025-10-12 17:45:07] 2025-10-12 21:43:54,950 | INFO     | -- intersect: -4691842670.88262
[2025-10-12 17:45:07] 2025-10-12 21:43:54,950 | INFO     | current memory leak: 2.67 B/s (using 125 data points, chi2=0.01)
[2025-10-12 17:45:07] 2025-10-12 21:43:54,950 | INFO     | could have reported an average CPU frequency of 3500 MHz (9 samples)
[2025-10-12 17:45:07] 2025-10-12 21:43:54,951 | INFO     | ..............................
[2025-10-12 17:45:07] 2025-10-12 21:43:54,951 | INFO     | . Timing measurements:
[2025-10-12 17:45:07] 2025-10-12 21:43:54,951 | INFO     | . get job = 0 s
[2025-10-12 17:45:07] 2025-10-12 21:43:54,951 | INFO     | . initial setup = 3 s
[2025-10-12 17:45:07] 2025-10-12 21:43:54,951 | INFO     | . payload setup = 8 s
[2025-10-12 17:45:07] 2025-10-12 21:43:54,951 | INFO     | . stage-in = 0 s
[2025-10-12 17:45:07] 2025-10-12 21:43:54,951 | INFO     | . payload execution = 9484 s
[2025-10-12 17:45:07] 2025-10-12 21:43:54,961 | INFO     | . stage-out = 1 s
[2025-10-12 17:45:07] 2025-10-12 21:43:54,961 | INFO     | . log creation = 0 s
[2025-10-12 17:45:07] 2025-10-12 21:43:54,961 | INFO     | ..............................
[2025-10-12 17:45:07] 2025-10-12 21:43:55,093 | INFO     | 
[2025-10-12 17:45:07] 2025-10-12 21:43:55,093 | INFO     | job summary report
[2025-10-12 17:45:07] 2025-10-12 21:43:55,093 | INFO     | --------------------------------------------------
[2025-10-12 17:45:07] 2025-10-12 21:43:55,093 | INFO     | PanDA job id: 6840225672
[2025-10-12 17:45:07] 2025-10-12 21:43:55,093 | INFO     | task id: 46676269
[2025-10-12 17:45:07] 2025-10-12 21:43:55,093 | INFO     | errors: (none)
[2025-10-12 17:45:07] 2025-10-12 21:43:55,093 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:45:07] 2025-10-12 21:43:55,093 | INFO     | pilot state: finished 
[2025-10-12 17:45:07] 2025-10-12 21:43:55,093 | INFO     | transexitcode: 0
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | exeerrorcode: 0
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | exeerrordiag: 
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | exitcode: 0
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | exitmsg: OK
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | cpuconsumptiontime: 29762 s
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | nevents: 400
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | neventsw: 0
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | pid: 3875099
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | pgrp: 3875099
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | corecount: 10
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | event service: False
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | sizes: {0: 2348857, 7: 2349119, 11: 2349147, 9497: 2377468, 9500: 2386466, 9501: 2386522, 9531: 2386908}
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | --------------------------------------------------
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | 
[2025-10-12 17:45:07] 2025-10-12 21:43:55,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 17:45:07] 2025-10-12 21:43:55,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,294 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,294 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:45:07] 2025-10-12 21:43:55,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:45:07] 2025-10-12 21:43:55,296 | INFO     | job 6840225672 has completed (purged errors)
[2025-10-12 17:45:07] 2025-10-12 21:43:55,296 | INFO     | overall cleanup function is called
[2025-10-12 17:45:07] 2025-10-12 21:43:56,304 | INFO     | --- collectZombieJob: --- 10, [3875099]
[2025-10-12 17:45:07] 2025-10-12 21:43:56,304 | INFO     | zombie collector waiting for pid 3875099
[2025-10-12 17:45:07] 2025-10-12 21:43:56,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:45:07] 2025-10-12 21:43:56,304 | INFO     | collected zombie processes
[2025-10-12 17:45:07] 2025-10-12 21:43:56,304 | INFO     | will attempt to kill all subprocesses of pid=3875099
[2025-10-12 17:45:07] 2025-10-12 21:43:58,829 | INFO     | process IDs to be killed: [3875099] (in reverse order)
[2025-10-12 17:45:07] 2025-10-12 21:43:59,285 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:45:07] 2025-10-12 21:43:59,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:45:07] 2025-10-12 21:43:59,320 | INFO     | did not find any defunct processes belonging to 3875099
[2025-10-12 17:45:07] 2025-10-12 21:43:59,365 | INFO     | did not find any defunct processes belonging to 3875099
[2025-10-12 17:45:07] 2025-10-12 21:43:59,365 | INFO     | ready for new job
[2025-10-12 17:45:07] 2025-10-12 21:43:59,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:45:07] 2025-10-12 21:43:59,367 | INFO     | ***************************************
[2025-10-12 17:45:07] 2025-10-12 21:43:59,367 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:45:07] 2025-10-12 21:43:59,367 | INFO     | ***************************************
[2025-10-12 17:45:07] 2025-10-12 21:43:59,367 | INFO     | 
[2025-10-12 17:45:07] 2025-10-12 21:43:59,395 | INFO     | architecture information:
[2025-10-12 17:45:07] 2025-10-12 21:43:59,400 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:45:07] 2025-10-12 21:43:59,533 | INFO     | cat /etc/os-release:
[2025-10-12 17:45:07] NAME="CentOS Linux"
[2025-10-12 17:45:07] VERSION="7 (Core)"
[2025-10-12 17:45:07] ID="centos"
[2025-10-12 17:45:07] ID_LIKE="rhel fedora"
[2025-10-12 17:45:07] VERSION_ID="7"
[2025-10-12 17:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:45:07] ANSI_COLOR="0;31"
[2025-10-12 17:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:45:07] HOME_URL="https://www.centos.org/"
[2025-10-12 17:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:45:07] 
[2025-10-12 17:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:45:07] 
[2025-10-12 17:45:07] 2025-10-12 21:43:59,534 | INFO     | ***************************************
[2025-10-12 17:45:07] 2025-10-12 21:44:00,038 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 17:45:07] 2025-10-12 21:44:00,144 | INFO     | sufficient remaining disk space (126888181760 B)
[2025-10-12 17:45:07] 2025-10-12 21:44:00,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:45:07] 2025-10-12 21:44:00,145 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:45:07] 2025-10-12 21:44:00,145 | INFO     | update_server=False
[2025-10-12 17:45:07] 2025-10-12 21:44:00,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:45:07] 2025-10-12 21:44:00,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:45:07] 2025-10-12 21:44:00,145 | INFO     | aborting loop
[2025-10-12 17:45:07] 2025-10-12 21:44:00,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:45:07] 2025-10-12 21:44:00,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:45:07] 2025-10-12 21:44:00,537 | INFO     | all data control threads have been joined
[2025-10-12 17:45:07] 2025-10-12 21:44:00,964 | INFO     | all payload control threads have been joined
[2025-10-12 17:45:07] 2025-10-12 21:44:01,151 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:01,155 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:01,156 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:01,219 | INFO     | [job] validate thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:01,287 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:01,380 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:01,550 | INFO     | all job control threads have been joined
[2025-10-12 17:45:07] 2025-10-12 21:44:01,559 | INFO     | [data] control thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:01,652 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:01,970 | INFO     | [payload] control thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:02,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:02,152 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:02,463 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:02,480 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:02,555 | INFO     | [job] control thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:02,625 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:02,721 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:45:07] 2025-10-12 21:44:06,733 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:45:07] 2025-10-12 21:44:28,452 | INFO     | PID=3854433 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:45:07] 2025-10-12 21:44:28,452 | INFO     | .. there are 83 such processes running
[2025-10-12 17:45:07] 2025-10-12 21:44:28,452 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:45:07] 2025-10-12 21:44:28,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:45:07] 2025-10-12 21:44:28,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:45:07] 2025-10-12 21:44:59,633 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:45:07] 2025-10-12 21:45:00,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140575346435904)>', '<ExcThread(monitor, started 140574413813504)>']
[2025-10-12 17:45:07] 2025-10-12 21:45:01,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:45:07] 2025-10-12 21:45:01,773 | INFO     | [monitor] control thread has ended
[2025-10-12 17:45:07] 2025-10-12 21:45:05,913 | INFO     | all workflow threads have been joined
[2025-10-12 17:45:07] 2025-10-12 21:45:05,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:45:07] 2025-10-12 21:45:05,914 | INFO     | traces error code: 0
[2025-10-12 17:45:07] 2025-10-12 21:45:05,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:45:07] 2025-10-12 21:45:06,349 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:45:07] 2025-10-12 21:45:06,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:45:07] 2025-10-12 21:45:06,433 [wrapper] pilotpid: 3854433
[2025-10-12 17:45:07] 2025-10-12 21:45:06,485 [wrapper] Pilot exit status: 0
[2025-10-12 17:45:07] 2025-10-12 21:45:06,654 [wrapper] pandaids: 6840225672
[2025-10-12 17:45:07] 2025-10-12 21:45:07,025 [wrapper] cleanup supervisor_pilot  920664 3854434
[2025-10-12 17:45:07] 2025-10-12 21:45:07,072 [wrapper] Test setup, not cleaning
[2025-10-12 17:45:07] 2025-10-12 21:45:07,112 [wrapper] apfmon messages muted
[2025-10-12 17:45:07] 2025-10-12 21:45:07,147 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:45:07] 2025-10-12 21:45:07,201 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:45:07]  *** Error codes and diagnostics ***
[2025-10-12 17:45:07]     "exeErrorCode": 0,
[2025-10-12 17:45:07]     "exeErrorDiag": "",
[2025-10-12 17:45:07]     "pilotErrorCode": 0,
[2025-10-12 17:45:07]     "pilotErrorDiag": "",
[2025-10-12 17:45:07]  *** Listing of results directory ***
[2025-10-12 17:45:07] total 414608
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:51 queuedata.json
[2025-10-12 17:45:07] -rwx------. 1 boincer umatlas     36292 Oct 12 11:51 runpilot2-wrapper.sh
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:45:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:04 run_atlas
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:04 job.xml
[2025-10-12 17:45:07] -rw-r--r--. 2 boincer umatlas 223383259 Oct 12 15:04 EVNT.46676267._004591.pool.root.1
[2025-10-12 17:45:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:04 shared
[2025-10-12 17:45:07] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 15:04 input.tar.gz
[2025-10-12 17:45:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:04 start_atlas.sh
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:04 boinc_lockfile
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:04 pandaJob.out
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas    975528 Oct 12 15:04 agis_schedconf.cvmfs.json
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:45:07] drwx------. 5 boincer umatlas      4096 Oct 12 15:04 pilot3
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas      6936 Oct 12 17:36 init_data.xml
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas 194200236 Oct 12 17:42 HITS.46676269._082739.pool.root.1
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas       529 Oct 12 17:42 boinc_task_state.xml
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas      1047 Oct 12 17:43 memory_monitor_summary.json
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas    429409 Oct 12 17:43 log.46676269._082739.job.log.tgz.1
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas        95 Oct 12 17:43 pilot_heartbeat.json
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas      7787 Oct 12 17:43 heartbeat.json
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:45 boinc_mmap_file
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas        27 Oct 12 17:45 wrapper_checkpoint.txt
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas      4825 Oct 12 17:45 pilotlog.txt
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas   1109398 Oct 12 17:45 log.46676269._082739.job.log.1
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas       357 Oct 12 17:45 output.list
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:45 runtime_log
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas   1556480 Oct 12 17:45 result.tar.gz
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas      8700 Oct 12 17:45 runtime_log.err
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas       656 Oct 12 17:45 PmnKDmWXDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNMUMDmfLKjvm.diag
[2025-10-12 17:45:07] -rw-r--r--. 1 boincer umatlas     20964 Oct 12 17:45 stderr.txt
[2025-10-12 17:45:07] HITS file was successfully produced:
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas 194200236 Oct 12 17:42 shared/HITS.pool.root.1
[2025-10-12 17:45:07]  *** Contents of shared directory: ***
[2025-10-12 17:45:07] total 409900
[2025-10-12 17:45:07] -rw-r--r--. 2 boincer umatlas 223383259 Oct 12 15:04 ATLAS.root_0
[2025-10-12 17:45:07] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 15:04 input.tar.gz
[2025-10-12 17:45:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:04 start_atlas.sh
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas 194200236 Oct 12 17:42 HITS.pool.root.1
[2025-10-12 17:45:07] -rw-------. 1 boincer umatlas   1556480 Oct 12 17:45 result.tar.gz
17:45:09 (3841617): run_atlas exited; CPU time 30044.554961
17:45:09 (3841617): called boinc_finish(0)

</stderr_txt>
]]>

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