Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:10:06 (6580): wrapper (7.7.26015): starting
06:10:06 (6580): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:10:06] Arguments: --nthreads 8
[2025-10-13 06:10:06] Threads: 8
[2025-10-13 06:10:06] Checking for CVMFS
[2025-10-13 06:10:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:10:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:10:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:10:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:10:08] 2.11.2.0 3063 221368 143472 151647 3 61 12756583 25165825 4632 130560 0 119503731 99.871 67829133 3233 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 06:10:08] CVMFS is ok
[2025-10-13 06:10:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:10:08] Checking for apptainer binary...
[2025-10-13 06:10:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:10:08] Running /usr/bin/apptainer --version
[2025-10-13 06:10:08] apptainer version 1.3.2-1.el7
[2025-10-13 06:10:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:10:17] cg-vwn462.simple-grid.lan
[2025-10-13 06:10:17] apptainer works
[2025-10-13 06:10:17] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:10:17] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:10:17] Starting ATLAS job with PandaID=6840390450
[2025-10-13 06:10:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:07:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:07:11] 2025-10-13 08:06:28,468 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:07:11] 2025-10-13 08:06:28,468 | INFO     | sum of square deviations: 3346927870.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,470 | INFO     | sum of deviations: 21501095901.999947
[2025-10-13 10:07:11] 2025-10-13 08:06:28,470 | INFO     | mean x: 1760336014.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,470 | INFO     | mean y: 2509643.257918552
[2025-10-13 10:07:11] 2025-10-13 08:06:28,471 | INFO     | -- intersect: -11306115737.0549
[2025-10-13 10:07:11] 2025-10-13 08:06:28,471 | INFO     | intersect: -11306115737.0549
[2025-10-13 10:07:11] 2025-10-13 08:06:28,471 | INFO     | chi2: 4.0822472864808805
[2025-10-13 10:07:11] 2025-10-13 08:06:28,472 | INFO     | sum of square deviations: 3124858590.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,473 | INFO     | sum of deviations: 21333675607.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,474 | INFO     | mean x: 1760335861.5
[2025-10-13 10:07:11] 2025-10-13 08:06:28,474 | INFO     | mean y: 2509528.287037037
[2025-10-13 10:07:11] 2025-10-13 08:06:28,474 | INFO     | -- intersect: -12015453252.105494
[2025-10-13 10:07:11] 2025-10-13 08:06:28,474 | INFO     | intersect: -12015453252.105494
[2025-10-13 10:07:11] 2025-10-13 08:06:28,474 | INFO     | chi2: 4.086281234990561
[2025-10-13 10:07:11] 2025-10-13 08:06:28,475 | INFO     | current chi2=4.086281234990561 (change=-0.09881685813202636 %)
[2025-10-13 10:07:11] 2025-10-13 08:06:28,475 | INFO     | right removable region: 215
[2025-10-13 10:07:11] 2025-10-13 08:06:28,475 | INFO     | sum of square deviations: 3124858590.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,477 | INFO     | sum of deviations: -46844939782.50001
[2025-10-13 10:07:11] 2025-10-13 08:06:28,477 | INFO     | mean x: 1760336166.5
[2025-10-13 10:07:11] 2025-10-13 08:06:28,477 | INFO     | mean y: 2556460.810185185
[2025-10-13 10:07:11] 2025-10-13 08:06:28,477 | INFO     | -- intersect: 26391859957.7884
[2025-10-13 10:07:11] 2025-10-13 08:06:28,477 | INFO     | intersect: 26391859957.7884
[2025-10-13 10:07:11] 2025-10-13 08:06:28,477 | INFO     | chi2: 0.35414946498816324
[2025-10-13 10:07:11] 2025-10-13 08:06:28,477 | INFO     | current chi2=0.35414946498816324 (change=91.32464448782918 %)
[2025-10-13 10:07:11] 2025-10-13 08:06:28,478 | INFO     | sum of square deviations: 2912836010.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,479 | INFO     | sum of deviations: -55641801724.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,479 | INFO     | mean x: 1760336319.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,480 | INFO     | mean y: 2562712.0331753553
[2025-10-13 10:07:11] 2025-10-13 08:06:28,480 | INFO     | -- intersect: 33628995540.070763
[2025-10-13 10:07:11] 2025-10-13 08:06:28,480 | INFO     | intersect: 33628995540.070763
[2025-10-13 10:07:11] 2025-10-13 08:06:28,480 | INFO     | chi2: 0.20640536938738022
[2025-10-13 10:07:11] 2025-10-13 08:06:28,480 | INFO     | current chi2=0.20640536938738022 (change=41.71800615475195 %)
[2025-10-13 10:07:11] 2025-10-13 08:06:28,481 | INFO     | sum of square deviations: 2710627567.5
[2025-10-13 10:07:11] 2025-10-13 08:06:28,482 | INFO     | sum of deviations: -50510660789.49999
[2025-10-13 10:07:11] 2025-10-13 08:06:28,482 | INFO     | mean x: 1760336471.5
[2025-10-13 10:07:11] 2025-10-13 08:06:28,483 | INFO     | mean y: 2558838.4611650486
[2025-10-13 10:07:11] 2025-10-13 08:06:28,483 | INFO     | -- intersect: 32805205521.98488
[2025-10-13 10:07:11] 2025-10-13 08:06:28,483 | INFO     | intersect: 32805205521.98488
[2025-10-13 10:07:11] 2025-10-13 08:06:28,483 | INFO     | chi2: 0.2051822005476074
[2025-10-13 10:07:11] 2025-10-13 08:06:28,483 | INFO     | current chi2=0.2051822005476074 (change=0.592605145594429 %)
[2025-10-13 10:07:11] 2025-10-13 08:06:28,483 | INFO     | left removable region: 30
[2025-10-13 10:07:11] 2025-10-13 08:06:28,483 | INFO     | sum of square deviations: 1963274020.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,485 | INFO     | sum of deviations: -29671767132.000004
[2025-10-13 10:07:11] 2025-10-13 08:06:28,485 | INFO     | mean x: 1760336746.0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,485 | INFO     | mean y: 2543099.416216216
[2025-10-13 10:07:11] 2025-10-13 08:06:28,485 | INFO     | -- intersect: 26607235806.150368
[2025-10-13 10:07:11] 2025-10-13 08:06:28,485 | INFO     | intersect: 26607235806.150368
[2025-10-13 10:07:11] 2025-10-13 08:06:28,485 | INFO     | chi2: 0.17126473257925004
[2025-10-13 10:07:11] 2025-10-13 08:06:28,486 | INFO     | -- intersect: 26607235806.150368
[2025-10-13 10:07:11] 2025-10-13 08:06:28,486 | INFO     | current memory leak: -15.11 B/s (using 185 data points, chi2=0.17)
[2025-10-13 10:07:11] 2025-10-13 08:06:28,486 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | ..............................
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | . Timing measurements:
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | . get job = 0 s
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | . initial setup = 12 s
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | . payload setup = 127 s
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | . stage-in = 0 s
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | . payload execution = 13630 s
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | . stage-out = 1 s
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | . log creation = 0 s
[2025-10-13 10:07:11] 2025-10-13 08:06:28,487 | INFO     | ..............................
[2025-10-13 10:07:11] 2025-10-13 08:06:28,612 | INFO     | 
[2025-10-13 10:07:11] 2025-10-13 08:06:28,612 | INFO     | job summary report
[2025-10-13 10:07:11] 2025-10-13 08:06:28,612 | INFO     | --------------------------------------------------
[2025-10-13 10:07:11] 2025-10-13 08:06:28,612 | INFO     | PanDA job id: 6840390450
[2025-10-13 10:07:11] 2025-10-13 08:06:28,612 | INFO     | task id: 46676269
[2025-10-13 10:07:11] 2025-10-13 08:06:28,612 | INFO     | errors: (none)
[2025-10-13 10:07:11] 2025-10-13 08:06:28,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:07:11] 2025-10-13 08:06:28,612 | INFO     | pilot state: finished 
[2025-10-13 10:07:11] 2025-10-13 08:06:28,612 | INFO     | transexitcode: 0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | exeerrorcode: 0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | exeerrordiag: 
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | exitcode: 0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | exitmsg: OK
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | cpuconsumptiontime: 51015 s
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | nevents: 400
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | neventsw: 0
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | pid: 16937
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | pgrp: 16937
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | corecount: 8
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | event service: False
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | sizes: {0: 2348580, 1: 2348835, 12: 2348835, 23: 2348863, 33: 2348891, 44: 2348947, 55: 2349103, 66: 2349131, 76: 2349159, 87: 2349215, 92: 2349505, 98: 2349813, 1
[2025-10-13 10:07:11] 2025-10-13 08:06:28,613 | INFO     | --------------------------------------------------
[2025-10-13 10:07:11] 2025-10-13 08:06:28,614 | INFO     | 
[2025-10-13 10:07:11] 2025-10-13 08:06:28,614 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2025-10-13 10:07:11] 2025-10-13 08:06:28,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,699 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,699 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:07:11] 2025-10-13 08:06:28,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,699 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:07:11] 2025-10-13 08:06:28,699 | INFO     | job 6840390450 has completed (purged errors)
[2025-10-13 10:07:11] 2025-10-13 08:06:28,699 | INFO     | overall cleanup function is called
[2025-10-13 10:07:11] 2025-10-13 08:06:29,204 | INFO     | PID=10371 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 10:07:11] 2025-10-13 08:06:29,204 | INFO     | .. there are 9 such processes running
[2025-10-13 10:07:11] 2025-10-13 08:06:29,708 | INFO     | --- collectZombieJob: --- 10, [16937]
[2025-10-13 10:07:11] 2025-10-13 08:06:29,708 | INFO     | zombie collector waiting for pid 16937
[2025-10-13 10:07:11] 2025-10-13 08:06:29,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:07:11] 2025-10-13 08:06:29,708 | INFO     | collected zombie processes
[2025-10-13 10:07:11] 2025-10-13 08:06:29,708 | INFO     | will attempt to kill all subprocesses of pid=16937
[2025-10-13 10:07:11] 2025-10-13 08:06:29,805 | INFO     | process IDs to be killed: [16937] (in reverse order)
[2025-10-13 10:07:11] 2025-10-13 08:06:29,889 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:07:11] 2025-10-13 08:06:29,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:07:11] 2025-10-13 08:06:29,893 | INFO     | did not find any defunct processes belonging to 16937
[2025-10-13 10:07:11] 2025-10-13 08:06:29,896 | INFO     | did not find any defunct processes belonging to 16937
[2025-10-13 10:07:11] 2025-10-13 08:06:29,897 | INFO     | ready for new job
[2025-10-13 10:07:11] 2025-10-13 08:06:29,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:07:11] 2025-10-13 08:06:29,899 | INFO     | ***************************************
[2025-10-13 10:07:11] 2025-10-13 08:06:29,899 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:07:11] 2025-10-13 08:06:29,899 | INFO     | ***************************************
[2025-10-13 10:07:11] 2025-10-13 08:06:29,899 | INFO     | 
[2025-10-13 10:07:11] 2025-10-13 08:06:29,900 | INFO     | pilot is running in a VM
[2025-10-13 10:07:11] 2025-10-13 08:06:29,900 | INFO     | architecture information:
[2025-10-13 10:07:11] 2025-10-13 08:06:29,901 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:07:11] 2025-10-13 08:06:29,973 | INFO     | cat /etc/os-release:
[2025-10-13 10:07:11] NAME="CentOS Linux"
[2025-10-13 10:07:11] VERSION="7 (Core)"
[2025-10-13 10:07:11] ID="centos"
[2025-10-13 10:07:11] ID_LIKE="rhel fedora"
[2025-10-13 10:07:11] VERSION_ID="7"
[2025-10-13 10:07:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:07:11] ANSI_COLOR="0;31"
[2025-10-13 10:07:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:07:11] HOME_URL="https://www.centos.org/"
[2025-10-13 10:07:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:07:11] 
[2025-10-13 10:07:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:07:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:07:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:07:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:07:11] 
[2025-10-13 10:07:11] 2025-10-13 08:06:29,973 | INFO     | ***************************************
[2025-10-13 10:07:11] 2025-10-13 08:06:30,476 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2025-10-13 10:07:11] 2025-10-13 08:06:30,587 | INFO     | sufficient remaining disk space (496083402752 B)
[2025-10-13 10:07:11] 2025-10-13 08:06:30,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:07:11] 2025-10-13 08:06:30,588 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:07:11] 2025-10-13 08:06:30,588 | INFO     | update_server=False
[2025-10-13 10:07:11] 2025-10-13 08:06:30,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:07:11] 2025-10-13 08:06:30,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:07:11] 2025-10-13 08:06:30,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:07:11] 2025-10-13 08:06:30,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:07:11] 2025-10-13 08:06:30,593 | INFO     | aborting loop
[2025-10-13 10:07:11] 2025-10-13 08:06:30,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:07:11] 2025-10-13 08:06:31,499 | INFO     | all payload control threads have been joined
[2025-10-13 10:07:11] 2025-10-13 08:06:31,568 | INFO     | all data control threads have been joined
[2025-10-13 10:07:11] 2025-10-13 08:06:31,593 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:31,595 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:31,599 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:31,757 | INFO     | all job control threads have been joined
[2025-10-13 10:07:11] 2025-10-13 08:06:31,792 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:31,983 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:32,505 | INFO     | [payload] control thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:32,531 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:32,573 | INFO     | [data] control thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:32,581 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:32,599 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:32,763 | INFO     | [job] control thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:32,802 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:32,864 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:33,036 | INFO     | [job] validate thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:33,071 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:06:34,815 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:07:11] 2025-10-13 08:07:01,425 | INFO     | PID=10371 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 10:07:11] 2025-10-13 08:07:01,425 | INFO     | .. there are 9 such processes running
[2025-10-13 10:07:11] 2025-10-13 08:07:01,427 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:07:11] 2025-10-13 08:07:01,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:07:11] 2025-10-13 08:07:01,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:07:11] 2025-10-13 08:07:04,533 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:07:11] 2025-10-13 08:07:06,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673942812480)>', '<ExcThread(monitor, started 140673508427520)>']
[2025-10-13 10:07:11] 2025-10-13 08:07:06,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:07:11] 2025-10-13 08:07:06,453 | INFO     | [monitor] control thread has ended
[2025-10-13 10:07:11] 2025-10-13 08:07:11,429 | INFO     | all workflow threads have been joined
[2025-10-13 10:07:11] 2025-10-13 08:07:11,429 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:07:11] 2025-10-13 08:07:11,429 | INFO     | traces error code: 0
[2025-10-13 10:07:11] 2025-10-13 08:07:11,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:07:11] 2025-10-13 08:07:11,600 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:07:11] 2025-10-13 08:07:11,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:07:11] 2025-10-13 08:07:11,611 [wrapper] pilotpid: 10371
[2025-10-13 10:07:11] 2025-10-13 08:07:11,618 [wrapper] Pilot exit status: 0
[2025-10-13 10:07:11] 2025-10-13 08:07:11,660 [wrapper] pandaids: 6840390450
[2025-10-13 10:07:11] 2025-10-13 08:07:11,704 [wrapper] cleanup supervisor_pilot  7077 10372
[2025-10-13 10:07:11] 2025-10-13 08:07:11,708 [wrapper] Test setup, not cleaning
[2025-10-13 10:07:11] 2025-10-13 08:07:11,713 [wrapper] apfmon messages muted
[2025-10-13 10:07:11] 2025-10-13 08:07:11,716 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:07:11] 2025-10-13 08:07:11,719 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:07:11]  *** Error codes and diagnostics ***
[2025-10-13 10:07:11]     "exeErrorCode": 0,
[2025-10-13 10:07:11]     "exeErrorDiag": "",
[2025-10-13 10:07:11]     "pilotErrorCode": 0,
[2025-10-13 10:07:11]     "pilotErrorDiag": "",
[2025-10-13 10:07:11]  *** Listing of results directory ***
[2025-10-13 10:07:11] total 416700
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc    557409 Oct 12 18:01 pilot3.tar.gz
[2025-10-13 10:07:11] -rwx------. 1 boinc boinc     36292 Oct 12 18:16 runpilot2-wrapper.sh
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc      5112 Oct 12 18:16 queuedata.json
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc       100 Oct 13 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:07:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 06:10 run_atlas
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc       105 Oct 13 06:10 job.xml
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc      6391 Oct 13 06:10 init_data.xml
[2025-10-13 10:07:11] -rw-r--r--. 2 boinc boinc 220313920 Oct 13 06:10 EVNT.46676267._004733.pool.root.1
[2025-10-13 10:07:11] -rw-r--r--. 2 boinc boinc     15120 Oct 13 06:10 start_atlas.sh
[2025-10-13 10:07:11] drwxrwx--x. 2 boinc boinc        68 Oct 13 06:10 shared
[2025-10-13 10:07:11] -rw-r--r--. 2 boinc boinc    569677 Oct 13 06:10 input.tar.gz
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc         0 Oct 13 06:10 boinc_lockfile
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc      2549 Oct 13 06:10 pandaJob.out
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc    974365 Oct 13 06:13 agis_schedconf.cvmfs.json
[2025-10-13 10:07:11] drwx------. 5 boinc boinc      4096 Oct 13 06:13 pilot3
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc 197826695 Oct 13 10:05 HITS.46676269._083282.pool.root.1
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc       531 Oct 13 10:05 boinc_task_state.xml
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc      1019 Oct 13 10:06 memory_monitor_summary.json
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc   1560580 Oct 13 10:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc    464851 Oct 13 10:06 log.46676269._083282.job.log.tgz.1
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc      7788 Oct 13 10:06 heartbeat.json
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc        95 Oct 13 10:07 pilot_heartbeat.json
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc      8192 Oct 13 10:07 boinc_mmap_file
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc        28 Oct 13 10:07 wrapper_checkpoint.txt
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc      4885 Oct 13 10:07 pilotlog.txt
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc   1874366 Oct 13 10:07 log.46676269._083282.job.log.1
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc       357 Oct 13 10:07 output.list
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc       620 Oct 13 10:07 runtime_log
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc   2355200 Oct 13 10:07 result.tar.gz
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc      8717 Oct 13 10:07 runtime_log.err
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc       656 Oct 13 10:07 gBMODmVvDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5OUMDmIaRobm.diag
[2025-10-13 10:07:11] -rw-r--r--. 1 boinc boinc     20735 Oct 13 10:07 stderr.txt
[2025-10-13 10:07:11] HITS file was successfully produced:
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc 197826695 Oct 13 10:05 shared/HITS.pool.root.1
[2025-10-13 10:07:11]  *** Contents of shared directory: ***
[2025-10-13 10:07:11] total 411220
[2025-10-13 10:07:11] -rw-r--r--. 2 boinc boinc 220313920 Oct 13 06:10 ATLAS.root_0
[2025-10-13 10:07:11] -rw-r--r--. 2 boinc boinc     15120 Oct 13 06:10 start_atlas.sh
[2025-10-13 10:07:11] -rw-r--r--. 2 boinc boinc    569677 Oct 13 06:10 input.tar.gz
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc 197826695 Oct 13 10:05 HITS.pool.root.1
[2025-10-13 10:07:11] -rw-------. 1 boinc boinc   2355200 Oct 13 10:07 result.tar.gz
10:07:13 (6580): run_atlas exited; CPU time 51186.899645
10:07:13 (6580): called boinc_finish(0)

</stderr_txt>
]]>

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