Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:02:18 (7799): wrapper (7.7.26015): starting
15:02:18 (7799): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:02:18] Arguments: --nthreads 8
[2025-10-12 15:02:18] Threads: 8
[2025-10-12 15:02:18] Checking for CVMFS
[2025-10-12 15:02:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:02:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:02:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:02:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:02:18] 2.11.2.0 17210 53260 128180 151633 3 57 16815420 18432001 1833 130560 0 48487235 99.976 2402111 35131 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:02:18] CVMFS is ok
[2025-10-12 15:02:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:02:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:02:18] Further information can be found at the LHC@home message board.
[2025-10-12 15:02:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:02:18] Checking for apptainer binary...
[2025-10-12 15:02:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:02:18] Running /usr/bin/apptainer --version
[2025-10-12 15:02:18] apptainer version 1.3.2-1.el7
[2025-10-12 15:02:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:02:19] c-206-14.aglt2.org
[2025-10-12 15:02:19] apptainer works
[2025-10-12 15:02:19] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:02:19] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:02:19] Starting ATLAS job with PandaID=6840225579
[2025-10-12 15:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:54:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:54:53] 2025-10-12 21:53:50,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,094 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:54:53] 2025-10-12 21:53:51,100 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.6666666666665
[2025-10-12 17:54:53] 2025-10-12 21:53:51,105 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840225579/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,105 | INFO     | extracted standard info from prmon json
[2025-10-12 17:54:53] 2025-10-12 21:53:51,106 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:54:53] 2025-10-12 21:53:51,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:54:53] 2025-10-12 21:53:51,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:54:53] 2025-10-12 21:53:51,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:54:53] 2025-10-12 21:53:51,112 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:54:53] 2025-10-12 21:53:51,112 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,113 | INFO     | sum of deviations: 2373035663.999998
[2025-10-12 17:54:53] 2025-10-12 21:53:51,114 | INFO     | mean x: 1760300867.5
[2025-10-12 17:54:53] 2025-10-12 21:53:51,114 | INFO     | mean y: 2492168.964285714
[2025-10-12 17:54:53] 2025-10-12 21:53:51,114 | INFO     | -- intersect: -2838697891.979716
[2025-10-12 17:54:53] 2025-10-12 21:53:51,114 | INFO     | intersect: -2838697891.979716
[2025-10-12 17:54:53] 2025-10-12 21:53:51,114 | INFO     | chi2: 1.4791497545720418
[2025-10-12 17:54:53] 2025-10-12 21:53:51,115 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,116 | INFO     | sum of deviations: 2311631782.9999995
[2025-10-12 17:54:53] 2025-10-12 21:53:51,116 | INFO     | mean x: 1760300715.0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,117 | INFO     | mean y: 2492095.3496932513
[2025-10-12 17:54:53] 2025-10-12 21:53:51,117 | INFO     | -- intersect: -3027773056.315436
[2025-10-12 17:54:53] 2025-10-12 21:53:51,117 | INFO     | intersect: -3027773056.315436
[2025-10-12 17:54:53] 2025-10-12 21:53:51,118 | INFO     | chi2: 1.4795238835643376
[2025-10-12 17:54:53] 2025-10-12 21:53:51,118 | INFO     | current chi2=1.4795238835643376 (change=-0.025293516842321073 %)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,118 | INFO     | right removable region: 162
[2025-10-12 17:54:53] 2025-10-12 21:53:51,118 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,120 | INFO     | sum of deviations: -20935321573.0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,120 | INFO     | mean x: 1760301020.0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,120 | INFO     | mean y: 2519665.306748466
[2025-10-12 17:54:53] 2025-10-12 21:53:51,120 | INFO     | -- intersect: 27446157903.89601
[2025-10-12 17:54:53] 2025-10-12 21:53:51,120 | INFO     | intersect: 27446157903.89601
[2025-10-12 17:54:53] 2025-10-12 21:53:51,121 | INFO     | chi2: 0.13805759168735807
[2025-10-12 17:54:53] 2025-10-12 21:53:51,121 | INFO     | current chi2=0.13805759168735807 (change=90.66642229695654 %)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,121 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 17:54:53] 2025-10-12 21:53:51,123 | INFO     | sum of deviations: -16879313446.499998
[2025-10-12 17:54:53] 2025-10-12 21:53:51,123 | INFO     | mean x: 1760301172.5
[2025-10-12 17:54:53] 2025-10-12 21:53:51,123 | INFO     | mean y: 2514484.411392405
[2025-10-12 17:54:53] 2025-10-12 21:53:51,123 | INFO     | -- intersect: 24297098577.580193
[2025-10-12 17:54:53] 2025-10-12 21:53:51,123 | INFO     | intersect: 24297098577.580193
[2025-10-12 17:54:53] 2025-10-12 21:53:51,124 | INFO     | chi2: 0.1309240085942679
[2025-10-12 17:54:53] 2025-10-12 21:53:51,124 | INFO     | current chi2=0.1309240085942679 (change=5.167106716771299 %)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,124 | INFO     | left removable region: 20
[2025-10-12 17:54:53] 2025-10-12 21:53:51,125 | INFO     | sum of square deviations: 887813855.5
[2025-10-12 17:54:53] 2025-10-12 21:53:51,126 | INFO     | sum of deviations: -5718520762.000001
[2025-10-12 17:54:53] 2025-10-12 21:53:51,126 | INFO     | mean x: 1760301294.5
[2025-10-12 17:54:53] 2025-10-12 21:53:51,126 | INFO     | mean y: 2499169.1267605633
[2025-10-12 17:54:53] 2025-10-12 21:53:51,126 | INFO     | -- intersect: 11340821315.839111
[2025-10-12 17:54:53] 2025-10-12 21:53:51,126 | INFO     | intersect: 11340821315.839111
[2025-10-12 17:54:53] 2025-10-12 21:53:51,127 | INFO     | chi2: 0.07714824543703518
[2025-10-12 17:54:53] 2025-10-12 21:53:51,127 | INFO     | -- intersect: 11340821315.839111
[2025-10-12 17:54:53] 2025-10-12 21:53:51,127 | INFO     | current memory leak: -6.44 B/s (using 142 data points, chi2=0.08)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,128 | INFO     | could have reported an average CPU frequency of 2532 MHz (9 samples)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,128 | INFO     | ..............................
[2025-10-12 17:54:53] 2025-10-12 21:53:51,128 | INFO     | . Timing measurements:
[2025-10-12 17:54:53] 2025-10-12 21:53:51,128 | INFO     | . get job = 0 s
[2025-10-12 17:54:53] 2025-10-12 21:53:51,128 | INFO     | . initial setup = 2 s
[2025-10-12 17:54:53] 2025-10-12 21:53:51,129 | INFO     | . payload setup = 4 s
[2025-10-12 17:54:53] 2025-10-12 21:53:51,129 | INFO     | . stage-in = 0 s
[2025-10-12 17:54:53] 2025-10-12 21:53:51,129 | INFO     | . payload execution = 10250 s
[2025-10-12 17:54:53] 2025-10-12 21:53:51,129 | INFO     | . stage-out = 1 s
[2025-10-12 17:54:53] 2025-10-12 21:53:51,129 | INFO     | . log creation = 0 s
[2025-10-12 17:54:53] 2025-10-12 21:53:51,129 | INFO     | ..............................
[2025-10-12 17:54:53] 2025-10-12 21:53:51,289 | INFO     | 
[2025-10-12 17:54:53] 2025-10-12 21:53:51,289 | INFO     | job summary report
[2025-10-12 17:54:53] 2025-10-12 21:53:51,289 | INFO     | --------------------------------------------------
[2025-10-12 17:54:53] 2025-10-12 21:53:51,289 | INFO     | PanDA job id: 6840225579
[2025-10-12 17:54:53] 2025-10-12 21:53:51,289 | INFO     | task id: 46676269
[2025-10-12 17:54:53] 2025-10-12 21:53:51,290 | INFO     | errors: (none)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,290 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:54:53] 2025-10-12 21:53:51,290 | INFO     | pilot state: finished 
[2025-10-12 17:54:53] 2025-10-12 21:53:51,290 | INFO     | transexitcode: 0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,290 | INFO     | exeerrorcode: 0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,290 | INFO     | exeerrordiag: 
[2025-10-12 17:54:53] 2025-10-12 21:53:51,291 | INFO     | exitcode: 0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,291 | INFO     | exitmsg: OK
[2025-10-12 17:54:53] 2025-10-12 21:53:51,291 | INFO     | cpuconsumptiontime: 76957 s
[2025-10-12 17:54:53] 2025-10-12 21:53:51,291 | INFO     | nevents: 400
[2025-10-12 17:54:53] 2025-10-12 21:53:51,291 | INFO     | neventsw: 0
[2025-10-12 17:54:53] 2025-10-12 21:53:51,291 | INFO     | pid: 18003
[2025-10-12 17:54:53] 2025-10-12 21:53:51,292 | INFO     | pgrp: 18003
[2025-10-12 17:54:53] 2025-10-12 21:53:51,292 | INFO     | corecount: 8
[2025-10-12 17:54:53] 2025-10-12 21:53:51,292 | INFO     | event service: False
[2025-10-12 17:54:53] 2025-10-12 21:53:51,292 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 4: 2349175, 12: 2349203, 10258: 2378077, 10261: 2387131, 10266: 2387333}
[2025-10-12 17:54:53] 2025-10-12 21:53:51,292 | INFO     | --------------------------------------------------
[2025-10-12 17:54:53] 2025-10-12 21:53:51,292 | INFO     | 
[2025-10-12 17:54:53] 2025-10-12 21:53:51,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 17:54:53] 2025-10-12 21:53:51,319 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,320 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,320 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,321 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,321 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,322 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,322 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,322 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,322 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,322 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,322 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,323 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,323 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:54:53] 2025-10-12 21:53:51,323 | INFO     | job 6840225579 has completed (purged errors)
[2025-10-12 17:54:53] 2025-10-12 21:53:51,323 | INFO     | overall cleanup function is called
[2025-10-12 17:54:53] 2025-10-12 21:53:52,330 | INFO     | --- collectZombieJob: --- 10, [18003]
[2025-10-12 17:54:53] 2025-10-12 21:53:52,331 | INFO     | zombie collector waiting for pid 18003
[2025-10-12 17:54:53] 2025-10-12 21:53:52,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:54:53] 2025-10-12 21:53:52,331 | INFO     | collected zombie processes
[2025-10-12 17:54:53] 2025-10-12 21:53:52,331 | INFO     | will attempt to kill all subprocesses of pid=18003
[2025-10-12 17:54:53] 2025-10-12 21:53:52,503 | INFO     | process IDs to be killed: [18003] (in reverse order)
[2025-10-12 17:54:53] 2025-10-12 21:53:52,565 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:54:53] 2025-10-12 21:53:52,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:54:53] 2025-10-12 21:53:52,571 | INFO     | did not find any defunct processes belonging to 18003
[2025-10-12 17:54:53] 2025-10-12 21:53:52,575 | INFO     | did not find any defunct processes belonging to 18003
[2025-10-12 17:54:53] 2025-10-12 21:53:52,576 | INFO     | ready for new job
[2025-10-12 17:54:53] 2025-10-12 21:53:52,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:54:53] 2025-10-12 21:53:52,578 | INFO     | ***************************************
[2025-10-12 17:54:53] 2025-10-12 21:53:52,578 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:54:53] 2025-10-12 21:53:52,578 | INFO     | ***************************************
[2025-10-12 17:54:53] 2025-10-12 21:53:52,578 | INFO     | 
[2025-10-12 17:54:53] 2025-10-12 21:53:52,579 | INFO     | architecture information:
[2025-10-12 17:54:53] 2025-10-12 21:53:52,580 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:54:53] 2025-10-12 21:53:52,613 | INFO     | cat /etc/os-release:
[2025-10-12 17:54:53] NAME="CentOS Linux"
[2025-10-12 17:54:53] VERSION="7 (Core)"
[2025-10-12 17:54:53] ID="centos"
[2025-10-12 17:54:53] ID_LIKE="rhel fedora"
[2025-10-12 17:54:53] VERSION_ID="7"
[2025-10-12 17:54:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:54:53] ANSI_COLOR="0;31"
[2025-10-12 17:54:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:54:53] HOME_URL="https://www.centos.org/"
[2025-10-12 17:54:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:54:53] 
[2025-10-12 17:54:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:54:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:54:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:54:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:54:53] 
[2025-10-12 17:54:53] 2025-10-12 21:53:52,614 | INFO     | ***************************************
[2025-10-12 17:54:53] 2025-10-12 21:53:53,118 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 17:54:53] 2025-10-12 21:53:53,137 | INFO     | sufficient remaining disk space (28260171776 B)
[2025-10-12 17:54:53] 2025-10-12 21:53:53,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:54:53] 2025-10-12 21:53:53,138 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:54:53] 2025-10-12 21:53:53,138 | INFO     | update_server=False
[2025-10-12 17:54:53] 2025-10-12 21:53:53,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:54:53] 2025-10-12 21:53:53,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:54:53] 2025-10-12 21:53:53,497 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:54:53] 2025-10-12 21:53:53,498 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:54:53] 2025-10-12 21:53:53,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:54:53] 2025-10-12 21:53:53,498 | INFO     | will abort loop
[2025-10-12 17:54:53] 2025-10-12 21:53:53,550 | INFO     | all payload control threads have been joined
[2025-10-12 17:54:53] 2025-10-12 21:53:53,556 | INFO     | all data control threads have been joined
[2025-10-12 17:54:53] 2025-10-12 21:53:53,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:54:53] 2025-10-12 21:53:54,144 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,145 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,400 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,504 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,556 | INFO     | [payload] control thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,562 | INFO     | [data] control thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,633 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,664 | INFO     | all job control threads have been joined
[2025-10-12 17:54:53] 2025-10-12 21:53:54,738 | INFO     | [job] validate thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,813 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,850 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:54,920 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:55,633 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:55,670 | INFO     | [job] control thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:55,823 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:53:56,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:54:53] 2025-10-12 21:54:00,463 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:54:53] 2025-10-12 21:54:23,937 | INFO     | PID=11465 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:54:53] 2025-10-12 21:54:23,938 | INFO     | .. there are 3 such processes running
[2025-10-12 17:54:53] 2025-10-12 21:54:23,939 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:54:53] 2025-10-12 21:54:23,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:54:53] 2025-10-12 21:54:23,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:54:53] 2025-10-12 21:54:46,141 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:54:53] 2025-10-12 21:54:47,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878125258560)>', '<ExcThread(monitor, started 139877538584320)>']
[2025-10-12 17:54:53] 2025-10-12 21:54:48,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:54:53] 2025-10-12 21:54:48,059 | INFO     | [monitor] control thread has ended
[2025-10-12 17:54:53] 2025-10-12 21:54:53,017 | INFO     | all workflow threads have been joined
[2025-10-12 17:54:53] 2025-10-12 21:54:53,017 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:54:53] 2025-10-12 21:54:53,018 | INFO     | traces error code: 0
[2025-10-12 17:54:53] 2025-10-12 21:54:53,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:54:53] 2025-10-12 21:54:53,140 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:54:53] 2025-10-12 21:54:53,142 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:54:53] 2025-10-12 21:54:53,145 [wrapper] pilotpid: 11465
[2025-10-12 17:54:53] 2025-10-12 21:54:53,148 [wrapper] Pilot exit status: 0
[2025-10-12 17:54:53] 2025-10-12 21:54:53,157 [wrapper] pandaids: 6840225579
[2025-10-12 17:54:53] 2025-10-12 21:54:53,197 [wrapper] cleanup supervisor_pilot 30881 11466
[2025-10-12 17:54:53] 2025-10-12 21:54:53,200 [wrapper] Test setup, not cleaning
[2025-10-12 17:54:53] 2025-10-12 21:54:53,202 [wrapper] apfmon messages muted
[2025-10-12 17:54:53] 2025-10-12 21:54:53,204 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:54:53] 2025-10-12 21:54:53,207 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:54:53]  *** Error codes and diagnostics ***
[2025-10-12 17:54:53]     "exeErrorCode": 0,
[2025-10-12 17:54:53]     "exeErrorDiag": "",
[2025-10-12 17:54:53]     "pilotErrorCode": 0,
[2025-10-12 17:54:53]     "pilotErrorDiag": "",
[2025-10-12 17:54:53]  *** Listing of results directory ***
[2025-10-12 17:54:53] total 407544
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 11:47 queuedata.json
[2025-10-12 17:54:53] -rwx------ 1 boincer umatlas     36292 Oct 12 11:49 runpilot2-wrapper.sh
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:54:53] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:02 run_atlas
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:02 job.xml
[2025-10-12 17:54:53] -rw-r--r-- 2 boincer umatlas 221153153 Oct 12 15:02 EVNT.46676267._004588.pool.root.1
[2025-10-12 17:54:53] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:02 start_atlas.sh
[2025-10-12 17:54:53] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:02 shared
[2025-10-12 17:54:53] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 15:02 input.tar.gz
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:02 boinc_lockfile
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:02 pandaJob.out
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas    975528 Oct 12 15:02 agis_schedconf.cvmfs.json
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas   1560580 Oct 12 15:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:54:53] drwx------ 5 boincer umatlas      4096 Oct 12 15:02 pilot3
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 17:46 init_data.xml
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas       530 Oct 12 17:53 boinc_task_state.xml
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas 188576008 Oct 12 17:53 HITS.46676269._082646.pool.root.1
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas      1054 Oct 12 17:53 memory_monitor_summary.json
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas    401790 Oct 12 17:53 log.46676269._082646.job.log.tgz.1
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas      7858 Oct 12 17:53 heartbeat.json
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas        95 Oct 12 17:54 pilot_heartbeat.json
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:54 boinc_mmap_file
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas        28 Oct 12 17:54 wrapper_checkpoint.txt
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas      5007 Oct 12 17:54 pilotlog.txt
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas   1445638 Oct 12 17:54 log.46676269._082646.job.log.1
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas       357 Oct 12 17:54 output.list
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:54 runtime_log
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas   1863680 Oct 12 17:54 result.tar.gz
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas       661 Oct 12 17:54 vTCNDmYVDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmUkNDm5PHUXo.diag
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 17:54 runtime_log.err
[2025-10-12 17:54:53] -rw-r--r-- 1 boincer umatlas     21104 Oct 12 17:54 stderr.txt
[2025-10-12 17:54:53] HITS file was successfully produced:
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas 188576008 Oct 12 17:53 shared/HITS.pool.root.1
[2025-10-12 17:54:53]  *** Contents of shared directory: ***
[2025-10-12 17:54:53] total 402532
[2025-10-12 17:54:53] -rw-r--r-- 2 boincer umatlas 221153153 Oct 12 15:02 ATLAS.root_0
[2025-10-12 17:54:53] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:02 start_atlas.sh
[2025-10-12 17:54:53] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 15:02 input.tar.gz
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas 188576008 Oct 12 17:53 HITS.pool.root.1
[2025-10-12 17:54:53] -rw------- 1 boincer umatlas   1863680 Oct 12 17:54 result.tar.gz
17:54:54 (7799): run_atlas exited; CPU time 77062.154318
17:54:54 (7799): called boinc_finish(0)

</stderr_txt>
]]>

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