Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:06:30 (1145): wrapper (7.7.26015): starting
15:06:30 (1145): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:06:30] Arguments: --nthreads 8
[2025-10-12 15:06:30] Threads: 8
[2025-10-12 15:06:30] Checking for CVMFS
[2025-10-12 15:06:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:06:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:06:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:06:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:06:30] 2.11.2.0 11495 53299 128104 151633 3 57 17642718 18432000 1833 130560 0 48817829 99.976 2402238 27933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:06:30] CVMFS is ok
[2025-10-12 15:06:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:06:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:06:30] Further information can be found at the LHC@home message board.
[2025-10-12 15:06:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:06:30] Checking for apptainer binary...
[2025-10-12 15:06:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:06:30] Running /usr/bin/apptainer --version
[2025-10-12 15:06:30] apptainer version 1.3.2-1.el7
[2025-10-12 15:06:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:06:31] c-206-31.aglt2.org
[2025-10-12 15:06:31] apptainer works
[2025-10-12 15:06:31] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:06:31] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:06:31] Starting ATLAS job with PandaID=6840430111
[2025-10-12 15:06:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:10:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:10:07] 2025-10-12 22:09:05,341 | INFO     | monitor loop #795: job 0:6840430111 is in state 'finished'
[2025-10-12 18:10:07] 2025-10-12 22:09:05,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:10:07] 2025-10-12 22:09:05,875 | INFO     | time since job start (10941s) is within the limit (172800.0s)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,010 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 18:10:07] 2025-10-12 22:09:07,016 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2405.7916666666665
[2025-10-12 18:10:07] 2025-10-12 22:09:07,021 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840430111/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,022 | INFO     | extracted standard info from prmon json
[2025-10-12 18:10:07] 2025-10-12 22:09:07,022 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:10:07] 2025-10-12 22:09:07,023 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:10:07] 2025-10-12 22:09:07,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:10:07] 2025-10-12 22:09:07,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:10:07] 2025-10-12 22:09:07,029 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:10:07] 2025-10-12 22:09:07,029 | INFO     | sum of square deviations: 1778377530.0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,031 | INFO     | sum of deviations: 13298711138.000002
[2025-10-12 18:10:07] 2025-10-12 22:09:07,031 | INFO     | mean x: 1760301459.0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,031 | INFO     | mean y: 2476945.4636871507
[2025-10-12 18:10:07] 2025-10-12 22:09:07,031 | INFO     | -- intersect: -13161061293.259422
[2025-10-12 18:10:07] 2025-10-12 22:09:07,031 | INFO     | intersect: -13161061293.259422
[2025-10-12 18:10:07] 2025-10-12 22:09:07,032 | INFO     | chi2: 1.4319848347732238
[2025-10-12 18:10:07] 2025-10-12 22:09:07,032 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 18:10:07] 2025-10-12 22:09:07,034 | INFO     | sum of deviations: 12873464735.500004
[2025-10-12 18:10:07] 2025-10-12 22:09:07,034 | INFO     | mean x: 1760301306.5
[2025-10-12 18:10:07] 2025-10-12 22:09:07,034 | INFO     | mean y: 2476497.6264367816
[2025-10-12 18:10:07] 2025-10-12 22:09:07,034 | INFO     | -- intersect: -13870531444.959026
[2025-10-12 18:10:07] 2025-10-12 22:09:07,034 | INFO     | intersect: -13870531444.959026
[2025-10-12 18:10:07] 2025-10-12 22:09:07,035 | INFO     | chi2: 1.43304464506011
[2025-10-12 18:10:07] 2025-10-12 22:09:07,035 | INFO     | current chi2=1.43304464506011 (change=-0.07400988202881441 %)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,035 | INFO     | right removable region: 173
[2025-10-12 18:10:07] 2025-10-12 22:09:07,036 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 18:10:07] 2025-10-12 22:09:07,037 | INFO     | sum of deviations: -11425844150.5
[2025-10-12 18:10:07] 2025-10-12 22:09:07,037 | INFO     | mean x: 1760301611.5
[2025-10-12 18:10:07] 2025-10-12 22:09:07,037 | INFO     | mean y: 2502607.8908045976
[2025-10-12 18:10:07] 2025-10-12 22:09:07,038 | INFO     | -- intersect: 12315493505.983906
[2025-10-12 18:10:07] 2025-10-12 22:09:07,038 | INFO     | intersect: 12315493505.983906
[2025-10-12 18:10:07] 2025-10-12 22:09:07,038 | INFO     | chi2: 0.10080049211556537
[2025-10-12 18:10:07] 2025-10-12 22:09:07,038 | INFO     | current chi2=0.10080049211556537 (change=92.9607849421444 %)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,039 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,040 | INFO     | sum of deviations: -11095007814.0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,041 | INFO     | mean x: 1760301764.0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,041 | INFO     | mean y: 2502182.325443787
[2025-10-12 18:10:07] 2025-10-12 22:09:07,041 | INFO     | -- intersect: 13051928061.23845
[2025-10-12 18:10:07] 2025-10-12 22:09:07,041 | INFO     | intersect: 13051928061.23845
[2025-10-12 18:10:07] 2025-10-12 22:09:07,042 | INFO     | chi2: 0.08626416189879263
[2025-10-12 18:10:07] 2025-10-12 22:09:07,042 | INFO     | current chi2=0.08626416189879263 (change=14.42089211241864 %)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,042 | INFO     | left removable region: 20
[2025-10-12 18:10:07] 2025-10-12 22:09:07,042 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,043 | INFO     | sum of deviations: 587397792.0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,044 | INFO     | mean x: 1760301886.0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,044 | INFO     | mean y: 2487522.209150327
[2025-10-12 18:10:07] 2025-10-12 22:09:07,044 | INFO     | -- intersect: -928588838.5217398
[2025-10-12 18:10:07] 2025-10-12 22:09:07,044 | INFO     | intersect: -928588838.5217398
[2025-10-12 18:10:07] 2025-10-12 22:09:07,045 | INFO     | chi2: 0.011332060649216335
[2025-10-12 18:10:07] 2025-10-12 22:09:07,045 | INFO     | -- intersect: -928588838.5217398
[2025-10-12 18:10:07] 2025-10-12 22:09:07,045 | INFO     | current memory leak: 0.53 B/s (using 153 data points, chi2=0.01)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,046 | INFO     | could have reported an average CPU frequency of 2532 MHz (9 samples)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,046 | INFO     | ..............................
[2025-10-12 18:10:07] 2025-10-12 22:09:07,046 | INFO     | . Timing measurements:
[2025-10-12 18:10:07] 2025-10-12 22:09:07,046 | INFO     | . get job = 0 s
[2025-10-12 18:10:07] 2025-10-12 22:09:07,046 | INFO     | . initial setup = 2 s
[2025-10-12 18:10:07] 2025-10-12 22:09:07,047 | INFO     | . payload setup = 5 s
[2025-10-12 18:10:07] 2025-10-12 22:09:07,047 | INFO     | . stage-in = 0 s
[2025-10-12 18:10:07] 2025-10-12 22:09:07,047 | INFO     | . payload execution = 10909 s
[2025-10-12 18:10:07] 2025-10-12 22:09:07,047 | INFO     | . stage-out = 2 s
[2025-10-12 18:10:07] 2025-10-12 22:09:07,047 | INFO     | . log creation = 0 s
[2025-10-12 18:10:07] 2025-10-12 22:09:07,047 | INFO     | ..............................
[2025-10-12 18:10:07] 2025-10-12 22:09:07,208 | INFO     | 
[2025-10-12 18:10:07] 2025-10-12 22:09:07,209 | INFO     | job summary report
[2025-10-12 18:10:07] 2025-10-12 22:09:07,209 | INFO     | --------------------------------------------------
[2025-10-12 18:10:07] 2025-10-12 22:09:07,209 | INFO     | PanDA job id: 6840430111
[2025-10-12 18:10:07] 2025-10-12 22:09:07,209 | INFO     | task id: 46676269
[2025-10-12 18:10:07] 2025-10-12 22:09:07,209 | INFO     | errors: (none)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:10:07] 2025-10-12 22:09:07,210 | INFO     | pilot state: finished 
[2025-10-12 18:10:07] 2025-10-12 22:09:07,210 | INFO     | transexitcode: 0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,210 | INFO     | exeerrorcode: 0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,210 | INFO     | exeerrordiag: 
[2025-10-12 18:10:07] 2025-10-12 22:09:07,210 | INFO     | exitcode: 0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,211 | INFO     | exitmsg: OK
[2025-10-12 18:10:07] 2025-10-12 22:09:07,211 | INFO     | cpuconsumptiontime: 82506 s
[2025-10-12 18:10:07] 2025-10-12 22:09:07,211 | INFO     | nevents: 400
[2025-10-12 18:10:07] 2025-10-12 22:09:07,211 | INFO     | neventsw: 0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,211 | INFO     | pid: 13432
[2025-10-12 18:10:07] 2025-10-12 22:09:07,212 | INFO     | pgrp: 13432
[2025-10-12 18:10:07] 2025-10-12 22:09:07,212 | INFO     | corecount: 8
[2025-10-12 18:10:07] 2025-10-12 22:09:07,212 | INFO     | event service: False
[2025-10-12 18:10:07] 2025-10-12 22:09:07,212 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 5: 2349175, 12: 2349231, 10919: 2378517, 10922: 2387515, 10923: 2387571, 10927: 2387829}
[2025-10-12 18:10:07] 2025-10-12 22:09:07,212 | INFO     | --------------------------------------------------
[2025-10-12 18:10:07] 2025-10-12 22:09:07,212 | INFO     | 
[2025-10-12 18:10:07] 2025-10-12 22:09:07,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:10:07] 2025-10-12 22:09:07,240 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,241 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,241 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,241 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:10:07] 2025-10-12 22:09:07,244 | INFO     | job 6840430111 has completed (purged errors)
[2025-10-12 18:10:07] 2025-10-12 22:09:07,245 | INFO     | overall cleanup function is called
[2025-10-12 18:10:07] 2025-10-12 22:09:08,252 | INFO     | --- collectZombieJob: --- 10, [13432]
[2025-10-12 18:10:07] 2025-10-12 22:09:08,252 | INFO     | zombie collector waiting for pid 13432
[2025-10-12 18:10:07] 2025-10-12 22:09:08,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:10:07] 2025-10-12 22:09:08,253 | INFO     | collected zombie processes
[2025-10-12 18:10:07] 2025-10-12 22:09:08,253 | INFO     | will attempt to kill all subprocesses of pid=13432
[2025-10-12 18:10:07] 2025-10-12 22:09:08,420 | INFO     | process IDs to be killed: [13432] (in reverse order)
[2025-10-12 18:10:07] 2025-10-12 22:09:08,482 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:10:07] 2025-10-12 22:09:08,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:10:07] 2025-10-12 22:09:08,488 | INFO     | did not find any defunct processes belonging to 13432
[2025-10-12 18:10:07] 2025-10-12 22:09:08,492 | INFO     | did not find any defunct processes belonging to 13432
[2025-10-12 18:10:07] 2025-10-12 22:09:08,493 | INFO     | ready for new job
[2025-10-12 18:10:07] 2025-10-12 22:09:08,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:10:07] 2025-10-12 22:09:08,495 | INFO     | ***************************************
[2025-10-12 18:10:07] 2025-10-12 22:09:08,495 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:10:07] 2025-10-12 22:09:08,495 | INFO     | ***************************************
[2025-10-12 18:10:07] 2025-10-12 22:09:08,495 | INFO     | 
[2025-10-12 18:10:07] 2025-10-12 22:09:08,497 | INFO     | architecture information:
[2025-10-12 18:10:07] 2025-10-12 22:09:08,497 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:10:07] 2025-10-12 22:09:08,520 | INFO     | cat /etc/os-release:
[2025-10-12 18:10:07] NAME="CentOS Linux"
[2025-10-12 18:10:07] VERSION="7 (Core)"
[2025-10-12 18:10:07] ID="centos"
[2025-10-12 18:10:07] ID_LIKE="rhel fedora"
[2025-10-12 18:10:07] VERSION_ID="7"
[2025-10-12 18:10:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:10:07] ANSI_COLOR="0;31"
[2025-10-12 18:10:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:10:07] HOME_URL="https://www.centos.org/"
[2025-10-12 18:10:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:10:07] 
[2025-10-12 18:10:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:10:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:10:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:10:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:10:07] 
[2025-10-12 18:10:07] 2025-10-12 22:09:08,520 | INFO     | ***************************************
[2025-10-12 18:10:07] 2025-10-12 22:09:09,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:10:07] 2025-10-12 22:09:09,060 | INFO     | sufficient remaining disk space (28193062912 B)
[2025-10-12 18:10:07] 2025-10-12 22:09:09,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:10:07] 2025-10-12 22:09:09,061 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:10:07] 2025-10-12 22:09:09,061 | INFO     | update_server=False
[2025-10-12 18:10:07] 2025-10-12 22:09:09,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:10:07] 2025-10-12 22:09:09,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:10:07] 2025-10-12 22:09:09,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:10:07] 2025-10-12 22:09:09,063 | INFO     | aborting loop
[2025-10-12 18:10:07] 2025-10-12 22:09:09,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:10:07] 2025-10-12 22:09:09,471 | INFO     | all job control threads have been joined
[2025-10-12 18:10:07] 2025-10-12 22:09:09,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:10:07] 2025-10-12 22:09:09,681 | INFO     | all data control threads have been joined
[2025-10-12 18:10:07] 2025-10-12 22:09:10,017 | INFO     | all payload control threads have been joined
[2025-10-12 18:10:07] 2025-10-12 22:09:10,068 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:10,069 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:10,069 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:10,445 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:10,477 | INFO     | [job] control thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:10,531 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:10,590 | INFO     | [job] validate thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:10,686 | INFO     | [data] control thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:11,022 | INFO     | [payload] control thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:11,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:11,165 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:11,262 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:11,310 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:11,530 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:11,540 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:13,070 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:10:07] 2025-10-12 22:09:39,089 | INFO     | PID=5002 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 18:10:07] 2025-10-12 22:09:39,089 | INFO     | .. there are 3 such processes running
[2025-10-12 18:10:07] 2025-10-12 22:09:39,090 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:10:07] 2025-10-12 22:09:39,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:10:07] 2025-10-12 22:09:39,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:10:07] 2025-10-12 22:10:01,439 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:10:07] 2025-10-12 22:10:02,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707554449216)>', '<ExcThread(monitor, started 140706819602176)>']
[2025-10-12 18:10:07] 2025-10-12 22:10:03,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:10:07] 2025-10-12 22:10:03,216 | INFO     | [monitor] control thread has ended
[2025-10-12 18:10:07] 2025-10-12 22:10:07,369 | INFO     | all workflow threads have been joined
[2025-10-12 18:10:07] 2025-10-12 22:10:07,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:10:07] 2025-10-12 22:10:07,370 | INFO     | traces error code: 0
[2025-10-12 18:10:07] 2025-10-12 22:10:07,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:10:07] 2025-10-12 22:10:07,465 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:10:07] 2025-10-12 22:10:07,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:10:07] 2025-10-12 22:10:07,470 [wrapper] pilotpid: 5002
[2025-10-12 18:10:07] 2025-10-12 22:10:07,472 [wrapper] Pilot exit status: 0
[2025-10-12 18:10:07] 2025-10-12 22:10:07,480 [wrapper] pandaids: 6840430111
[2025-10-12 18:10:07] 2025-10-12 22:10:07,521 [wrapper] cleanup supervisor_pilot 25354 5003
[2025-10-12 18:10:07] 2025-10-12 22:10:07,523 [wrapper] Test setup, not cleaning
[2025-10-12 18:10:07] 2025-10-12 22:10:07,525 [wrapper] apfmon messages muted
[2025-10-12 18:10:07] 2025-10-12 22:10:07,527 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:10:07] 2025-10-12 22:10:07,529 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:10:07]  *** Error codes and diagnostics ***
[2025-10-12 18:10:07]     "exeErrorCode": 0,
[2025-10-12 18:10:07]     "exeErrorDiag": "",
[2025-10-12 18:10:07]     "pilotErrorCode": 0,
[2025-10-12 18:10:07]     "pilotErrorDiag": "",
[2025-10-12 18:10:07]  *** Listing of results directory ***
[2025-10-12 18:10:07] total 409400
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 18:10:07] -rwx------ 1 boincer umatlas     36292 Oct 12 13:40 runpilot2-wrapper.sh
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:40 queuedata.json
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas       100 Oct 12 15:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:10:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 15:06 run_atlas
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas       105 Oct 12 15:06 job.xml
[2025-10-12 18:10:07] -rw-r--r-- 2 boincer umatlas 220206102 Oct 12 15:06 EVNT.46676267._002504.pool.root.1
[2025-10-12 18:10:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:06 start_atlas.sh
[2025-10-12 18:10:07] drwxrwx--x 2 boincer umatlas      4096 Oct 12 15:06 shared
[2025-10-12 18:10:07] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 15:06 input.tar.gz
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas         0 Oct 12 15:06 boinc_lockfile
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:06 pandaJob.out
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas    975528 Oct 12 15:06 agis_schedconf.cvmfs.json
[2025-10-12 18:10:07] drwx------ 5 boincer umatlas      4096 Oct 12 15:06 pilot3
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 18:02 init_data.xml
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas 191195685 Oct 12 18:08 HITS.46676269._085067.pool.root.1
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas       531 Oct 12 18:08 boinc_task_state.xml
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas      1054 Oct 12 18:08 memory_monitor_summary.json
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas   1560580 Oct 12 18:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas    426242 Oct 12 18:09 log.46676269._085067.job.log.tgz.1
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas      7856 Oct 12 18:09 heartbeat.json
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas        95 Oct 12 18:09 pilot_heartbeat.json
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:09 boinc_mmap_file
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas        28 Oct 12 18:09 wrapper_checkpoint.txt
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas      4820 Oct 12 18:10 pilotlog.txt
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas   1534252 Oct 12 18:10 log.46676269._085067.job.log.1
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas       357 Oct 12 18:10 output.list
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:10 runtime_log
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas   1976320 Oct 12 18:10 result.tar.gz
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 18:10 runtime_log.err
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas       662 Oct 12 18:10 RatKDmTEFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMukNDmLO6fJo.diag
[2025-10-12 18:10:07] -rw-r--r-- 1 boincer umatlas     21118 Oct 12 18:10 stderr.txt
[2025-10-12 18:10:07] HITS file was successfully produced:
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas 191195685 Oct 12 18:08 shared/HITS.pool.root.1
[2025-10-12 18:10:07]  *** Contents of shared directory: ***
[2025-10-12 18:10:07] total 404276
[2025-10-12 18:10:07] -rw-r--r-- 2 boincer umatlas 220206102 Oct 12 15:06 ATLAS.root_0
[2025-10-12 18:10:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 15:06 start_atlas.sh
[2025-10-12 18:10:07] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 15:06 input.tar.gz
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas 191195685 Oct 12 18:08 HITS.pool.root.1
[2025-10-12 18:10:07] -rw------- 1 boincer umatlas   1976320 Oct 12 18:10 result.tar.gz
18:10:08 (1145): run_atlas exited; CPU time 82650.865707
18:10:08 (1145): called boinc_finish(0)

</stderr_txt>
]]>

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