Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:59:59 (13232): wrapper (7.7.26015): starting
14:59:59 (13232): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:59:59] Arguments: --nthreads 8
[2025-10-12 14:59:59] Threads: 8
[2025-10-12 14:59:59] Checking for CVMFS
[2025-10-12 14:59:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:59:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:59:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:59:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:59:59] 2.11.2.0 26213 1198 64208 151633 0 57 15476478 20275201 1 130560 0 907882 99.991 43609 39898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:59:59] CVMFS is ok
[2025-10-12 14:59:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:59:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:59:59] Further information can be found at the LHC@home message board.
[2025-10-12 14:59:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:59:59] Checking for apptainer binary...
[2025-10-12 14:59:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:59:59] Running /usr/bin/apptainer --version
[2025-10-12 14:59:59] apptainer version 1.3.2-1.el7
[2025-10-12 14:59:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:00:01] c-115-4.aglt2.org
[2025-10-12 15:00:01] apptainer works
[2025-10-12 15:00:01] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:00:01] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:00:01] Starting ATLAS job with PandaID=6840429922
[2025-10-12 15:00:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:45:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:45:35] 2025-10-12 20:44:56,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:45:35] 2025-10-12 20:44:56,265 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:45:35] 2025-10-12 20:44:56,265 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:45:35] 2025-10-12 20:44:56,268 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:45:35] 2025-10-12 20:44:56,268 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,269 | INFO     | sum of deviations: -7039814189.999999
[2025-10-12 16:45:35] 2025-10-12 20:44:56,269 | INFO     | mean x: 1760298760.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,269 | INFO     | mean y: 2528701.194174757
[2025-10-12 16:45:35] 2025-10-12 20:44:56,270 | INFO     | -- intersect: 36578714914.4732
[2025-10-12 16:45:35] 2025-10-12 20:44:56,270 | INFO     | intersect: 36578714914.4732
[2025-10-12 16:45:35] 2025-10-12 20:44:56,270 | INFO     | chi2: 2.284681481935684
[2025-10-12 16:45:35] 2025-10-12 20:44:56,270 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 16:45:35] 2025-10-12 20:44:56,271 | INFO     | sum of deviations: 238169375.99999925
[2025-10-12 16:45:35] 2025-10-12 20:44:56,271 | INFO     | mean x: 1760298607.5
[2025-10-12 16:45:35] 2025-10-12 20:44:56,271 | INFO     | mean y: 2551456.3061224488
[2025-10-12 16:45:35] 2025-10-12 20:44:56,271 | INFO     | -- intersect: -1434131156.134578
[2025-10-12 16:45:35] 2025-10-12 20:44:56,271 | INFO     | intersect: -1434131156.134578
[2025-10-12 16:45:35] 2025-10-12 20:44:56,272 | INFO     | chi2: 1.5288164620405533
[2025-10-12 16:45:35] 2025-10-12 20:44:56,272 | INFO     | current chi2=1.5288164620405533 (change=33.08404370025043 %)
[2025-10-12 16:45:35] 2025-10-12 20:44:56,272 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,272 | INFO     | sum of deviations: 573403415.9999988
[2025-10-12 16:45:35] 2025-10-12 20:44:56,272 | INFO     | mean x: 1760298455.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,273 | INFO     | mean y: 2552662.7419354836
[2025-10-12 16:45:35] 2025-10-12 20:44:56,273 | INFO     | -- intersect: -4044785855.8344083
[2025-10-12 16:45:35] 2025-10-12 20:44:56,273 | INFO     | intersect: -4044785855.8344083
[2025-10-12 16:45:35] 2025-10-12 20:44:56,273 | INFO     | chi2: 1.531233355081002
[2025-10-12 16:45:35] 2025-10-12 20:44:56,273 | INFO     | current chi2=1.531233355081002 (change=-0.1580891559227968 %)
[2025-10-12 16:45:35] 2025-10-12 20:44:56,273 | INFO     | right removable region: 92
[2025-10-12 16:45:35] 2025-10-12 20:44:56,274 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 16:45:35] 2025-10-12 20:44:56,274 | INFO     | sum of deviations: -21664275172.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,274 | INFO     | mean x: 1760298912.5
[2025-10-12 16:45:35] 2025-10-12 20:44:56,274 | INFO     | mean y: 2575061.612244898
[2025-10-12 16:45:35] 2025-10-12 20:44:56,274 | INFO     | -- intersect: 130685593031.12296
[2025-10-12 16:45:35] 2025-10-12 20:44:56,274 | INFO     | intersect: 130685593031.12296
[2025-10-12 16:45:35] 2025-10-12 20:44:56,275 | INFO     | chi2: 0.8907130925295664
[2025-10-12 16:45:35] 2025-10-12 20:44:56,275 | INFO     | current chi2=0.8907130925295664 (change=61.013686171478284 %)
[2025-10-12 16:45:35] 2025-10-12 20:44:56,275 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,275 | INFO     | sum of deviations: -18921782760.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,275 | INFO     | mean x: 1760299065.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,276 | INFO     | mean y: 2565156.7634408604
[2025-10-12 16:45:35] 2025-10-12 20:44:56,276 | INFO     | -- intersect: 133561041800.20358
[2025-10-12 16:45:35] 2025-10-12 20:44:56,276 | INFO     | intersect: 133561041800.20358
[2025-10-12 16:45:35] 2025-10-12 20:44:56,276 | INFO     | chi2: 0.891524846105657
[2025-10-12 16:45:35] 2025-10-12 20:44:56,276 | INFO     | current chi2=0.891524846105657 (change=-0.09113524690483758 %)
[2025-10-12 16:45:35] 2025-10-12 20:44:56,276 | INFO     | left removable region: 20
[2025-10-12 16:45:35] 2025-10-12 20:44:56,276 | INFO     | sum of square deviations: 115715658.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,277 | INFO     | sum of deviations: -5899458169.0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,277 | INFO     | mean x: 1760299034.5
[2025-10-12 16:45:35] 2025-10-12 20:44:56,277 | INFO     | mean y: 2570089.861111111
[2025-10-12 16:45:35] 2025-10-12 20:44:56,277 | INFO     | -- intersect: 89746781879.79742
[2025-10-12 16:45:35] 2025-10-12 20:44:56,277 | INFO     | intersect: 89746781879.79742
[2025-10-12 16:45:35] 2025-10-12 20:44:56,277 | INFO     | chi2: 0.07205550720134975
[2025-10-12 16:45:35] 2025-10-12 20:44:56,278 | INFO     | -- intersect: 89746781879.79742
[2025-10-12 16:45:35] 2025-10-12 20:44:56,278 | INFO     | current memory leak: -50.98 B/s (using 72 data points, chi2=0.07)
[2025-10-12 16:45:35] 2025-10-12 20:44:56,278 | INFO     | could have reported an average CPU frequency of 2119 MHz (7 samples)
[2025-10-12 16:45:35] 2025-10-12 20:44:56,278 | INFO     | ..............................
[2025-10-12 16:45:35] 2025-10-12 20:44:56,278 | INFO     | . Timing measurements:
[2025-10-12 16:45:35] 2025-10-12 20:44:56,278 | INFO     | . get job = 0 s
[2025-10-12 16:45:35] 2025-10-12 20:44:56,278 | INFO     | . initial setup = 2 s
[2025-10-12 16:45:35] 2025-10-12 20:44:56,279 | INFO     | . payload setup = 8 s
[2025-10-12 16:45:35] 2025-10-12 20:44:56,279 | INFO     | . stage-in = 0 s
[2025-10-12 16:45:35] 2025-10-12 20:44:56,279 | INFO     | . payload execution = 6238 s
[2025-10-12 16:45:35] 2025-10-12 20:44:56,279 | INFO     | . stage-out = 0 s
[2025-10-12 16:45:35] 2025-10-12 20:44:56,279 | INFO     | . log creation = 0 s
[2025-10-12 16:45:35] 2025-10-12 20:44:56,279 | INFO     | ..............................
[2025-10-12 16:45:35] 2025-10-12 20:44:56,363 | INFO     | 
[2025-10-12 16:45:35] 2025-10-12 20:44:56,363 | INFO     | job summary report
[2025-10-12 16:45:35] 2025-10-12 20:44:56,364 | INFO     | --------------------------------------------------
[2025-10-12 16:45:35] 2025-10-12 20:44:56,364 | INFO     | PanDA job id: 6840429922
[2025-10-12 16:45:35] 2025-10-12 20:44:56,364 | INFO     | task id: 46676269
[2025-10-12 16:45:35] 2025-10-12 20:44:56,364 | INFO     | errors: (none)
[2025-10-12 16:45:35] 2025-10-12 20:44:56,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:45:35] 2025-10-12 20:44:56,364 | INFO     | pilot state: finished 
[2025-10-12 16:45:35] 2025-10-12 20:44:56,365 | INFO     | transexitcode: 0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,365 | INFO     | exeerrorcode: 0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,365 | INFO     | exeerrordiag: 
[2025-10-12 16:45:35] 2025-10-12 20:44:56,365 | INFO     | exitcode: 0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,365 | INFO     | exitmsg: OK
[2025-10-12 16:45:35] 2025-10-12 20:44:56,365 | INFO     | cpuconsumptiontime: 46919 s
[2025-10-12 16:45:35] 2025-10-12 20:44:56,366 | INFO     | nevents: 400
[2025-10-12 16:45:35] 2025-10-12 20:44:56,366 | INFO     | neventsw: 0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,366 | INFO     | pid: 23575
[2025-10-12 16:45:35] 2025-10-12 20:44:56,366 | INFO     | pgrp: 23575
[2025-10-12 16:45:35] 2025-10-12 20:44:56,366 | INFO     | corecount: 8
[2025-10-12 16:45:35] 2025-10-12 20:44:56,367 | INFO     | event service: False
[2025-10-12 16:45:35] 2025-10-12 20:44:56,367 | INFO     | sizes: {0: 2348857, 1: 2348857, 6: 2349147, 11: 2349175, 6250: 2376144, 6252: 2385142, 6254: 2385326, 6260: 2385520}
[2025-10-12 16:45:35] 2025-10-12 20:44:56,367 | INFO     | --------------------------------------------------
[2025-10-12 16:45:35] 2025-10-12 20:44:56,367 | INFO     | 
[2025-10-12 16:45:35] 2025-10-12 20:44:56,367 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:45:35] 2025-10-12 20:44:56,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,401 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,401 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,402 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,402 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:45:35] 2025-10-12 20:44:56,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,403 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:45:35] 2025-10-12 20:44:56,403 | INFO     | job 6840429922 has completed (purged errors)
[2025-10-12 16:45:35] 2025-10-12 20:44:56,403 | INFO     | overall cleanup function is called
[2025-10-12 16:45:35] 2025-10-12 20:44:57,411 | INFO     | --- collectZombieJob: --- 10, [23575]
[2025-10-12 16:45:35] 2025-10-12 20:44:57,411 | INFO     | zombie collector waiting for pid 23575
[2025-10-12 16:45:35] 2025-10-12 20:44:57,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:45:35] 2025-10-12 20:44:57,412 | INFO     | collected zombie processes
[2025-10-12 16:45:35] 2025-10-12 20:44:57,412 | INFO     | will attempt to kill all subprocesses of pid=23575
[2025-10-12 16:45:35] 2025-10-12 20:44:57,495 | INFO     | process IDs to be killed: [23575] (in reverse order)
[2025-10-12 16:45:35] 2025-10-12 20:44:57,556 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:45:35] 2025-10-12 20:44:57,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:45:35] 2025-10-12 20:44:57,561 | INFO     | did not find any defunct processes belonging to 23575
[2025-10-12 16:45:35] 2025-10-12 20:44:57,564 | INFO     | did not find any defunct processes belonging to 23575
[2025-10-12 16:45:35] 2025-10-12 20:44:57,564 | INFO     | ready for new job
[2025-10-12 16:45:35] 2025-10-12 20:44:57,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:45:35] 2025-10-12 20:44:57,566 | INFO     | ***************************************
[2025-10-12 16:45:35] 2025-10-12 20:44:57,566 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:45:35] 2025-10-12 20:44:57,566 | INFO     | ***************************************
[2025-10-12 16:45:35] 2025-10-12 20:44:57,567 | INFO     | 
[2025-10-12 16:45:35] 2025-10-12 20:44:57,567 | INFO     | architecture information:
[2025-10-12 16:45:35] 2025-10-12 20:44:57,568 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:45:35] 2025-10-12 20:44:57,586 | INFO     | cat /etc/os-release:
[2025-10-12 16:45:35] NAME="CentOS Linux"
[2025-10-12 16:45:35] VERSION="7 (Core)"
[2025-10-12 16:45:35] ID="centos"
[2025-10-12 16:45:35] ID_LIKE="rhel fedora"
[2025-10-12 16:45:35] VERSION_ID="7"
[2025-10-12 16:45:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:45:35] ANSI_COLOR="0;31"
[2025-10-12 16:45:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:45:35] HOME_URL="https://www.centos.org/"
[2025-10-12 16:45:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:45:35] 
[2025-10-12 16:45:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:45:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:45:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:45:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:45:35] 
[2025-10-12 16:45:35] 2025-10-12 20:44:57,586 | INFO     | ***************************************
[2025-10-12 16:45:35] 2025-10-12 20:44:58,089 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:45:35] 2025-10-12 20:44:58,110 | INFO     | sufficient remaining disk space (18595446784 B)
[2025-10-12 16:45:35] 2025-10-12 20:44:58,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:45:35] 2025-10-12 20:44:58,111 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:45:35] 2025-10-12 20:44:58,111 | INFO     | update_server=False
[2025-10-12 16:45:35] 2025-10-12 20:44:58,111 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:45:35] 2025-10-12 20:44:58,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:45:35] 2025-10-12 20:44:58,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:45:35] 2025-10-12 20:44:58,112 | INFO     | aborting loop
[2025-10-12 16:45:35] 2025-10-12 20:44:58,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:45:35] 2025-10-12 20:44:59,117 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:44:59,118 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:44:59,118 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:44:59,206 | INFO     | all data control threads have been joined
[2025-10-12 16:45:35] 2025-10-12 20:44:59,318 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:44:59,330 | INFO     | all payload control threads have been joined
[2025-10-12 16:45:35] 2025-10-12 20:44:59,478 | INFO     | all job control threads have been joined
[2025-10-12 16:45:35] 2025-10-12 20:44:59,907 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:44:59,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,074 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,202 | INFO     | [job] validate thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,206 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,206 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,212 | INFO     | [data] control thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,336 | INFO     | [payload] control thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,377 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,479 | INFO     | [job] control thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,813 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:00,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:45:35] 2025-10-12 20:45:04,842 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:45:35] 2025-10-12 20:45:16,162 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-12 16:45:35] 2025-10-12 20:45:27,740 | INFO     | PID=17104 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 16:45:35] 2025-10-12 20:45:27,740 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:45:35] 2025-10-12 20:45:27,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:45:35] 2025-10-12 20:45:27,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:45:35] 2025-10-12 20:45:28,412 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:45:35] 2025-10-12 20:45:30,182 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587509708608)>', '<ExcThread(monitor, started 140586552125184)>']
[2025-10-12 16:45:35] 2025-10-12 20:45:30,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:45:35] 2025-10-12 20:45:30,756 | INFO     | [monitor] control thread has ended
[2025-10-12 16:45:35] 2025-10-12 20:45:35,199 | INFO     | all workflow threads have been joined
[2025-10-12 16:45:35] 2025-10-12 20:45:35,200 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:45:35] 2025-10-12 20:45:35,200 | INFO     | traces error code: 0
[2025-10-12 16:45:35] 2025-10-12 20:45:35,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:45:35] 2025-10-12 20:45:35,318 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:45:35] 2025-10-12 20:45:35,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:45:35] 2025-10-12 20:45:35,326 [wrapper] pilotpid: 17104
[2025-10-12 16:45:35] 2025-10-12 20:45:35,331 [wrapper] Pilot exit status: 0
[2025-10-12 16:45:35] 2025-10-12 20:45:35,349 [wrapper] pandaids: 6840429922
[2025-10-12 16:45:35] 2025-10-12 20:45:35,393 [wrapper] cleanup supervisor_pilot 29969 17105
[2025-10-12 16:45:35] 2025-10-12 20:45:35,398 [wrapper] Test setup, not cleaning
[2025-10-12 16:45:35] 2025-10-12 20:45:35,403 [wrapper] apfmon messages muted
[2025-10-12 16:45:35] 2025-10-12 20:45:35,408 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:45:35] 2025-10-12 20:45:35,413 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:45:35]  *** Error codes and diagnostics ***
[2025-10-12 16:45:35]     "exeErrorCode": 0,
[2025-10-12 16:45:35]     "exeErrorDiag": "",
[2025-10-12 16:45:35]     "pilotErrorCode": 0,
[2025-10-12 16:45:35]     "pilotErrorDiag": "",
[2025-10-12 16:45:35]  *** Listing of results directory ***
[2025-10-12 16:45:35] total 408228
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:38 queuedata.json
[2025-10-12 16:45:35] -rwx------ 1 boincer umatlas     36292 Oct 12 13:38 runpilot2-wrapper.sh
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:45:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:59 run_atlas
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:59 job.xml
[2025-10-12 16:45:35] -rw-r--r-- 2 boincer umatlas 224567397 Oct 12 14:59 EVNT.46676267._002414.pool.root.1
[2025-10-12 16:45:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:59 start_atlas.sh
[2025-10-12 16:45:35] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:59 shared
[2025-10-12 16:45:35] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 14:59 input.tar.gz
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:59 boinc_lockfile
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 15:00 pandaJob.out
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas    975528 Oct 12 15:00 agis_schedconf.cvmfs.json
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas   1560580 Oct 12 15:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:45:35] drwx------ 5 boincer umatlas      4096 Oct 12 15:00 pilot3
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 16:39 init_data.xml
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas 187070431 Oct 12 16:44 HITS.46676269._085035.pool.root.1
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas      1050 Oct 12 16:44 memory_monitor_summary.json
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas        95 Oct 12 16:44 pilot_heartbeat.json
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas       529 Oct 12 16:44 boinc_task_state.xml
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas    351743 Oct 12 16:44 log.46676269._085035.job.log.tgz.1
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas      7848 Oct 12 16:44 heartbeat.json
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:45 boinc_mmap_file
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas        27 Oct 12 16:45 wrapper_checkpoint.txt
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas      4746 Oct 12 16:45 pilotlog.txt
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas    891124 Oct 12 16:45 log.46676269._085035.job.log.1
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas       357 Oct 12 16:45 output.list
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:45 runtime_log
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas   1259520 Oct 12 16:45 result.tar.gz
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas       657 Oct 12 16:45 xOKLDmGDFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnYUMDmeaClQo.diag
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 16:45 runtime_log.err
[2025-10-12 16:45:35] -rw-r--r-- 1 boincer umatlas     20849 Oct 12 16:45 stderr.txt
[2025-10-12 16:45:35] HITS file was successfully produced:
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas 187070431 Oct 12 16:44 shared/HITS.pool.root.1
[2025-10-12 16:45:35]  *** Contents of shared directory: ***
[2025-10-12 16:45:35] total 403808
[2025-10-12 16:45:35] -rw-r--r-- 2 boincer umatlas 224567397 Oct 12 14:59 ATLAS.root_0
[2025-10-12 16:45:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:59 start_atlas.sh
[2025-10-12 16:45:35] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 14:59 input.tar.gz
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas 187070431 Oct 12 16:44 HITS.pool.root.1
[2025-10-12 16:45:35] -rw------- 1 boincer umatlas   1259520 Oct 12 16:45 result.tar.gz
16:45:36 (13232): run_atlas exited; CPU time 46924.455764
16:45:36 (13232): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN