Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:53:03 (2331545): wrapper (7.7.26015): starting
00:53:03 (2331545): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:53:03] Arguments: --nthreads 12
[2025-10-13 00:53:03] Threads: 12
[2025-10-13 00:53:03] Checking for CVMFS
[2025-10-13 00:53:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:53:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:53:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:53:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:53:03] 2.13.2.0 8715 29673 234664 151640 1 188 40405612 46080000 6410 130560 0 201039117 99.891 56056517 21598 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-13 00:53:03] CVMFS is ok
[2025-10-13 00:53:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:53:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:53:03] Further information can be found at the LHC@home message board.
[2025-10-13 00:53:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:53:03] Checking for apptainer binary...
[2025-10-13 00:53:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:53:03] Running /usr/bin/apptainer --version
[2025-10-13 00:53:03] apptainer version 1.4.2-1.el9
[2025-10-13 00:53:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:53:04] mff2104.farm.particle.cz
[2025-10-13 00:53:04] apptainer works
[2025-10-13 00:53:04] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:53:04] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:53:04] Starting ATLAS job with PandaID=6839928962
[2025-10-13 00:53:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:50:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:50:38]  status_code=0
[2025-10-13 01:50:38]  storage_token=
[2025-10-13 01:50:38]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6839928962/log.46676269._078099.job.log.tgz.1
[2025-10-13 01:50:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/54/log.46676269._078099.job.log.tgz.1
[2025-10-13 01:50:38]  workdir=None
[2025-10-13 01:50:38] ]
[2025-10-13 01:50:38] 2025-10-12 23:49:55,545 | INFO     | transferring file log.46676269._078099.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6839928962/log.46676269._078099.job.log.tgz.1 to /scratch/.boinc/slot
[2025-10-13 01:50:38] 2025-10-12 23:49:55,545 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6839928962/log.46676269._078099.job.log.tgz.1 /scratch/.boinc/slots/1/log.46676269._078099.j
[2025-10-13 01:50:38] 2025-10-12 23:49:55,572 | INFO     | adding to output.list: log.46676269._078099.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/54/log.46676269._078099.job.log.tg
[2025-10-13 01:50:38] 2025-10-12 23:49:55,573 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:50:38] 2025-10-12 23:49:55,573 | INFO     | summary of transferred files:
[2025-10-13 01:50:38] 2025-10-12 23:49:55,573 | INFO     |  -- lfn=log.46676269._078099.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:50:38] 2025-10-12 23:49:55,573 | INFO     | stage-out finished correctly
[2025-10-13 01:50:38] 2025-10-12 23:49:56,861 | INFO     | time since job start (3401s) is within the limit (172800.0s)
[2025-10-13 01:50:38] 2025-10-12 23:49:57,221 | INFO     | monitor loop #250: job 0:6839928962 is in state 'finished'
[2025-10-13 01:50:38] 2025-10-12 23:49:57,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:50:38] 2025-10-12 23:49:58,708 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:50:38] 2025-10-12 23:49:58,867 | INFO     | time since job start (3403s) is within the limit (172800.0s)
[2025-10-13 01:50:38] 2025-10-12 23:49:59,724 | INFO     | monitor loop #251: job 0:6839928962 is in state 'finished'
[2025-10-13 01:50:38] 2025-10-12 23:49:59,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:50:38] 2025-10-12 23:49:59,957 | INFO     | job 6839928962 has state=finished
[2025-10-13 01:50:38] 2025-10-12 23:49:59,957 | INFO     | preparing for final server update for job 6839928962 in state='finished'
[2025-10-13 01:50:38] 2025-10-12 23:49:59,958 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:50:38] 2025-10-12 23:49:59,958 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:50:38] 2025-10-12 23:49:59,958 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:50:38] 2025-10-12 23:49:59,958 | INFO     | job 6839928962 has finished - writing final server update
[2025-10-13 01:50:38] 2025-10-12 23:49:59,958 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:50:38] 2025-10-12 23:49:59,959 | INFO     | executing command: lscpu
[2025-10-13 01:50:38] 2025-10-12 23:50:00,045 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:50:38] 2025-10-12 23:50:00,874 | INFO     | time since job start (3405s) is within the limit (172800.0s)
[2025-10-13 01:50:38] 2025-10-12 23:50:02,227 | INFO     | monitor loop #252: job 0:6839928962 is in state 'finished'
[2025-10-13 01:50:38] 2025-10-12 23:50:02,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:50:38] 2025-10-12 23:50:02,880 | INFO     | time since job start (3407s) is within the limit (172800.0s)
[2025-10-13 01:50:38] 2025-10-12 23:50:04,730 | INFO     | monitor loop #253: job 0:6839928962 is in state 'finished'
[2025-10-13 01:50:38] 2025-10-12 23:50:04,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:50:38] 2025-10-12 23:50:04,885 | INFO     | time since job start (3409s) is within the limit (172800.0s)
[2025-10-13 01:50:38] 2025-10-12 23:50:05,460 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:50:38] 2025-10-12 23:50:05,475 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2750.9574583333338
[2025-10-13 01:50:38] 2025-10-12 23:50:05,492 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6839928962/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:50:38] 2025-10-12 23:50:05,493 | INFO     | extracted standard info from prmon json
[2025-10-13 01:50:38] 2025-10-12 23:50:05,493 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:50:38] 2025-10-12 23:50:05,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:50:38] 2025-10-12 23:50:05,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:50:38] 2025-10-12 23:50:05,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:50:38] 2025-10-12 23:50:05,495 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:50:38] 2025-10-12 23:50:05,496 | INFO     | sum of square deviations: 36465800.0
[2025-10-13 01:50:38] 2025-10-12 23:50:05,496 | INFO     | sum of deviations: -367736609.0
[2025-10-13 01:50:38] 2025-10-12 23:50:05,496 | INFO     | mean x: 1760311393.0
[2025-10-13 01:50:38] 2025-10-12 23:50:05,496 | INFO     | mean y: 2702908.714285714
[2025-10-13 01:50:38] 2025-10-12 23:50:05,496 | INFO     | -- intersect: 17754430347.73623
[2025-10-13 01:50:38] 2025-10-12 23:50:05,496 | INFO     | intersect: 17754430347.73623
[2025-10-13 01:50:38] 2025-10-12 23:50:05,496 | INFO     | chi2: 0.0013809541719231099
[2025-10-13 01:50:38] 2025-10-12 23:50:05,496 | INFO     | -- intersect: 17754430347.73623
[2025-10-13 01:50:38] 2025-10-12 23:50:05,497 | INFO     | current memory leak: -10.08 B/s (using 49 data points, chi2=0.00)
[2025-10-13 01:50:38] 2025-10-12 23:50:05,497 | INFO     | could have reported an average CPU frequency of 2730 MHz (5 samples)
[2025-10-13 01:50:38] 2025-10-12 23:50:05,497 | INFO     | ..............................
[2025-10-13 01:50:38] 2025-10-12 23:50:05,497 | INFO     | . Timing measurements:
[2025-10-13 01:50:38] 2025-10-12 23:50:05,497 | INFO     | . get job = 0 s
[2025-10-13 01:50:38] 2025-10-12 23:50:05,497 | INFO     | . initial setup = 1 s
[2025-10-13 01:50:38] 2025-10-12 23:50:05,497 | INFO     | . payload setup = 6 s
[2025-10-13 01:50:38] 2025-10-12 23:50:05,497 | INFO     | . stage-in = 0 s
[2025-10-13 01:50:38] 2025-10-12 23:50:05,498 | INFO     | . payload execution = 3372 s
[2025-10-13 01:50:38] 2025-10-12 23:50:05,498 | INFO     | . stage-out = 0 s
[2025-10-13 01:50:38] 2025-10-12 23:50:05,498 | INFO     | . log creation = 0 s
[2025-10-13 01:50:38] 2025-10-12 23:50:05,498 | INFO     | ..............................
[2025-10-13 01:50:38] 2025-10-12 23:50:05,593 | INFO     | 
[2025-10-13 01:50:38] 2025-10-12 23:50:05,593 | INFO     | job summary report
[2025-10-13 01:50:38] 2025-10-12 23:50:05,593 | INFO     | --------------------------------------------------
[2025-10-13 01:50:38] 2025-10-12 23:50:05,593 | INFO     | PanDA job id: 6839928962
[2025-10-13 01:50:38] 2025-10-12 23:50:05,593 | INFO     | task id: 46676269
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | errors: (none)
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | pilot state: finished 
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | transexitcode: 0
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | exeerrorcode: 0
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | exeerrordiag: 
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | exitcode: 0
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | exitmsg: OK
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | cpuconsumptiontime: 36298 s
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | nevents: 400
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | neventsw: 0
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | pid: 2344940
[2025-10-13 01:50:38] 2025-10-12 23:50:05,594 | INFO     | pgrp: 2344940
[2025-10-13 01:50:38] 2025-10-12 23:50:05,595 | INFO     | corecount: 12
[2025-10-13 01:50:38] 2025-10-12 23:50:05,595 | INFO     | event service: False
[2025-10-13 01:50:38] 2025-10-12 23:50:05,595 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 3382: 2374865, 3383: 2374864, 3384: 2384048, 3387: 2384104, 3393: 2384330}
[2025-10-13 01:50:38] 2025-10-12 23:50:05,595 | INFO     | --------------------------------------------------
[2025-10-13 01:50:38] 2025-10-12 23:50:05,595 | INFO     | 
[2025-10-13 01:50:38] 2025-10-12 23:50:05,595 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-10-13 01:50:38] 2025-10-12 23:50:05,625 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:50:38] 2025-10-12 23:50:05,627 | INFO     | job 6839928962 has completed (purged errors)
[2025-10-13 01:50:38] 2025-10-12 23:50:05,628 | INFO     | overall cleanup function is called
[2025-10-13 01:50:38] 2025-10-12 23:50:06,637 | INFO     | --- collectZombieJob: --- 10, [2344940]
[2025-10-13 01:50:38] 2025-10-12 23:50:06,638 | INFO     | zombie collector waiting for pid 2344940
[2025-10-13 01:50:38] 2025-10-12 23:50:06,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:50:38] 2025-10-12 23:50:06,638 | INFO     | collected zombie processes
[2025-10-13 01:50:38] 2025-10-12 23:50:06,638 | INFO     | will attempt to kill all subprocesses of pid=2344940
[2025-10-13 01:50:38] 2025-10-12 23:50:06,973 | INFO     | process IDs to be killed: [2344940] (in reverse order)
[2025-10-13 01:50:38] 2025-10-12 23:50:07,087 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:50:38] 2025-10-12 23:50:07,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:50:38] 2025-10-12 23:50:07,099 | INFO     | did not find any defunct processes belonging to 2344940
[2025-10-13 01:50:38] 2025-10-12 23:50:07,108 | INFO     | did not find any defunct processes belonging to 2344940
[2025-10-13 01:50:38] 2025-10-12 23:50:07,108 | INFO     | ready for new job
[2025-10-13 01:50:38] 2025-10-12 23:50:07,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:50:38] 2025-10-12 23:50:07,111 | INFO     | ***************************************
[2025-10-13 01:50:38] 2025-10-12 23:50:07,111 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:50:38] 2025-10-12 23:50:07,111 | INFO     | ***************************************
[2025-10-13 01:50:38] 2025-10-12 23:50:07,111 | INFO     | 
[2025-10-13 01:50:38] 2025-10-12 23:50:07,117 | INFO     | architecture information:
[2025-10-13 01:50:38] 2025-10-12 23:50:07,119 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:50:38] 2025-10-12 23:50:07,140 | INFO     | cat /etc/os-release:
[2025-10-13 01:50:38] NAME="CentOS Linux"
[2025-10-13 01:50:38] VERSION="7 (Core)"
[2025-10-13 01:50:38] ID="centos"
[2025-10-13 01:50:38] ID_LIKE="rhel fedora"
[2025-10-13 01:50:38] VERSION_ID="7"
[2025-10-13 01:50:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:50:38] ANSI_COLOR="0;31"
[2025-10-13 01:50:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:50:38] HOME_URL="https://www.centos.org/"
[2025-10-13 01:50:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:50:38] 
[2025-10-13 01:50:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:50:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:50:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:50:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:50:38] 
[2025-10-13 01:50:38] 2025-10-12 23:50:07,141 | INFO     | ***************************************
[2025-10-13 01:50:38] 2025-10-12 23:50:07,644 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-10-13 01:50:38] 2025-10-12 23:50:07,669 | INFO     | sufficient remaining disk space (1681284661248 B)
[2025-10-13 01:50:38] 2025-10-12 23:50:07,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:50:38] 2025-10-12 23:50:07,670 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:50:38] 2025-10-12 23:50:07,670 | INFO     | update_server=False
[2025-10-13 01:50:38] 2025-10-12 23:50:07,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:50:38] 2025-10-12 23:50:07,702 | INFO     | all payload control threads have been joined
[2025-10-13 01:50:38] 2025-10-12 23:50:08,031 | INFO     | all data control threads have been joined
[2025-10-13 01:50:38] 2025-10-12 23:50:08,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:50:38] 2025-10-12 23:50:08,239 | INFO     | aborting loop
[2025-10-13 01:50:38] 2025-10-12 23:50:08,675 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:08,678 | INFO     | all job control threads have been joined
[2025-10-13 01:50:38] 2025-10-12 23:50:08,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:50:38] 2025-10-12 23:50:08,707 | INFO     | [payload] control thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:08,725 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:09,033 | INFO     | [data] control thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:09,085 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:09,122 | INFO     | [job] validate thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:09,244 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:09,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:50:38] 2025-10-12 23:50:09,335 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:09,486 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:09,486 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:09,684 | INFO     | [job] control thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:09,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:10,078 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:10,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:50:38] 2025-10-12 23:50:10,691 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:11,609 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:13,311 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:50:38] 2025-10-12 23:50:19,705 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:50:38] 2025-10-12 23:50:20,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528368498496)>', '<ExcThread(monitor, started 140527370499840)>']
[2025-10-13 01:50:38] 2025-10-12 23:50:25,264 | INFO     | all workflow threads have been joined
[2025-10-13 01:50:38] 2025-10-12 23:50:25,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:50:38] 2025-10-12 23:50:25,265 | INFO     | traces error code: 0
[2025-10-13 01:50:38] 2025-10-12 23:50:25,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:50:38] 2025-10-12 23:50:38,385 | INFO     | PID=2335892 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:50:38] 2025-10-12 23:50:38,386 | INFO     | .. there are 8 such processes running
[2025-10-13 01:50:38] 2025-10-12 23:50:38,386 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:50:38] 2025-10-12 23:50:38,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:50:38] 2025-10-12 23:50:38,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:50:38] 2025-10-12 23:50:38,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:50:38] 2025-10-12 23:50:38,387 | INFO     | [monitor] control thread has ended
[2025-10-13 01:50:38] 2025-10-12 23:50:38,572 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:50:38] 2025-10-12 23:50:38,576 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:50:38] 2025-10-12 23:50:38,580 [wrapper] pilotpid: 2335892
[2025-10-13 01:50:38] 2025-10-12 23:50:38,584 [wrapper] Pilot exit status: 0
[2025-10-13 01:50:38] 2025-10-12 23:50:38,598 [wrapper] pandaids: 6839928962
[2025-10-13 01:50:38] 2025-10-12 23:50:38,676 [wrapper] cleanup supervisor_pilot 2485791 2335893
[2025-10-13 01:50:38] 2025-10-12 23:50:38,680 [wrapper] Test setup, not cleaning
[2025-10-13 01:50:38] 2025-10-12 23:50:38,684 [wrapper] apfmon messages muted
[2025-10-13 01:50:38] 2025-10-12 23:50:38,687 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:50:38] 2025-10-12 23:50:38,691 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:50:38]  *** Error codes and diagnostics ***
[2025-10-13 01:50:38]     "exeErrorCode": 0,
[2025-10-13 01:50:38]     "exeErrorDiag": "",
[2025-10-13 01:50:38]     "pilotErrorCode": 0,
[2025-10-13 01:50:38]     "pilotErrorDiag": "",
[2025-10-13 01:50:38]  *** Listing of results directory ***
[2025-10-13 01:50:38] total 410072
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:10 pilot3.tar.gz
[2025-10-13 01:50:38] -rwx------ 1 boinc boinc     36292 Oct 12 14:20 runpilot2-wrapper.sh
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:20 queuedata.json
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:50:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:53 run_atlas
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:53 job.xml
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc      6665 Oct 13 00:53 init_data.xml
[2025-10-13 01:50:38] -rw-r--r-- 2 boinc boinc 219255282 Oct 13 00:53 EVNT.46676267._003770.pool.root.1
[2025-10-13 01:50:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:53 start_atlas.sh
[2025-10-13 01:50:38] drwxrwx--x 2 boinc boinc      4096 Oct 13 00:53 shared
[2025-10-13 01:50:38] -rw-r--r-- 2 boinc boinc    569674 Oct 13 00:53 input.tar.gz
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:53 boinc_lockfile
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc      2549 Oct 13 00:53 pandaJob.out
[2025-10-13 01:50:38] -rw------- 1 boinc boinc    975603 Oct 13 00:53 agis_schedconf.cvmfs.json
[2025-10-13 01:50:38] -rw------- 1 boinc boinc   1560580 Oct 13 00:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:50:38] drwx------ 5 boinc boinc      4096 Oct 13 00:53 pilot3
[2025-10-13 01:50:38] -rw------- 1 boinc boinc 194966164 Oct 13 01:49 HITS.46676269._078099.pool.root.1
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:49 boinc_task_state.xml
[2025-10-13 01:50:38] -rw------- 1 boinc boinc      1021 Oct 13 01:49 memory_monitor_summary.json
[2025-10-13 01:50:38] -rw------- 1 boinc boinc    377010 Oct 13 01:49 log.46676269._078099.job.log.tgz.1
[2025-10-13 01:50:38] -rw------- 1 boinc boinc      7783 Oct 13 01:50 heartbeat.json
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:50 boinc_mmap_file
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:50 wrapper_checkpoint.txt
[2025-10-13 01:50:38] -rw------- 1 boinc boinc       822 Oct 13 01:50 pilotlog.txt
[2025-10-13 01:50:38] -rw------- 1 boinc boinc        95 Oct 13 01:50 pilot_heartbeat.json
[2025-10-13 01:50:38] -rw------- 1 boinc boinc    513114 Oct 13 01:50 log.46676269._078099.job.log.1
[2025-10-13 01:50:38] -rw------- 1 boinc boinc       357 Oct 13 01:50 output.list
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:50 runtime_log
[2025-10-13 01:50:38] -rw------- 1 boinc boinc    911360 Oct 13 01:50 result.tar.gz
[2025-10-13 01:50:38] -rw------- 1 boinc boinc       662 Oct 13 01:50 EiLNDmDFAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1kjNDmRUAhTm.diag
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc      8764 Oct 13 01:50 runtime_log.err
[2025-10-13 01:50:38] -rw-r--r-- 1 boinc boinc     22159 Oct 13 01:50 stderr.txt
[2025-10-13 01:50:38] HITS file was successfully produced:
[2025-10-13 01:50:38] -rw------- 1 boinc boinc 194966164 Oct 13 01:49 shared/HITS.pool.root.1
[2025-10-13 01:50:38]  *** Contents of shared directory: ***
[2025-10-13 01:50:38] total 405996
[2025-10-13 01:50:38] -rw-r--r-- 2 boinc boinc 219255282 Oct 13 00:53 ATLAS.root_0
[2025-10-13 01:50:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:53 start_atlas.sh
[2025-10-13 01:50:38] -rw-r--r-- 2 boinc boinc    569674 Oct 13 00:53 input.tar.gz
[2025-10-13 01:50:38] -rw------- 1 boinc boinc 194966164 Oct 13 01:49 HITS.pool.root.1
[2025-10-13 01:50:38] -rw------- 1 boinc boinc    911360 Oct 13 01:50 result.tar.gz
01:50:40 (2331545): run_atlas exited; CPU time 36362.513168
01:50:40 (2331545): called boinc_finish(0)

</stderr_txt>
]]>

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