Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
14:54:26 (2136263): wrapper (7.7.26015): starting
14:54:26 (2136263): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:54:26] Arguments: --nthreads 8
[2025-10-12 14:54:26] Threads: 8
[2025-10-12 14:54:26] Checking for CVMFS
[2025-10-12 14:54:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:54:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:54:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:54:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:54:27] 2.12.7.0 3856927 5883 73548 151636 1 188 2477814 4096001 863 130560 0 18264208 99.998 202101 592 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 14:54:27] CVMFS is ok
[2025-10-12 14:54:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:54:27] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 14:54:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 14:54:27] Further information can be found at the LHC@home message board.
[2025-10-12 14:54:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:54:27] Checking for apptainer binary...
[2025-10-12 14:54:27] apptainer is not installed, using version from CVMFS
[2025-10-12 14:54:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:54:27] painter
[2025-10-12 14:54:27] apptainer works
[2025-10-12 14:54:27] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:54:27] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:54:27] Starting ATLAS job with PandaID=6840430099
[2025-10-12 14:54:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:34:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:34:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 15:34:46]  replicas=None
[2025-10-12 15:34:46]  scope=mc23_13p6TeV
[2025-10-12 15:34:46]  status=None
[2025-10-12 15:34:46]  status_code=0
[2025-10-12 15:34:46]  storage_token=
[2025-10-12 15:34:46]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6840430099/log.46676269._085055.job.log.tgz.1
[2025-10-12 15:34:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/8e/log.46676269._085055.job.log.tgz.1
[2025-10-12 15:34:46]  workdir=None
[2025-10-12 15:34:46] ]
[2025-10-12 15:34:46] 2025-10-12 21:33:40,796 | INFO     | transferring file log.46676269._085055.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6840430099/log.46676269._085055.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 15:34:46] 2025-10-12 21:33:40,796 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6840430099/log.46676269._085055.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-12 15:34:46] 2025-10-12 21:33:40,806 | INFO     | adding to output.list: log.46676269._085055.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/8e/log.46676269._085055.job.log.tg
[2025-10-12 15:34:46] 2025-10-12 21:33:40,806 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:34:46] 2025-10-12 21:33:40,806 | INFO     | summary of transferred files:
[2025-10-12 15:34:46] 2025-10-12 21:33:40,806 | INFO     |  -- lfn=log.46676269._085055.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:34:46] 2025-10-12 21:33:40,806 | INFO     | stage-out finished correctly
[2025-10-12 15:34:46] 2025-10-12 21:33:40,828 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:34:46] 2025-10-12 21:33:41,070 | INFO     | time since job start (2344s) is within the limit (172800.0s)
[2025-10-12 15:34:46] 2025-10-12 21:33:42,152 | INFO     | monitor loop #182: job 0:6840430099 is in state 'finished'
[2025-10-12 15:34:46] 2025-10-12 21:33:42,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:34:46] 2025-10-12 21:33:42,777 | INFO     | job 6840430099 has state=finished
[2025-10-12 15:34:46] 2025-10-12 21:33:42,777 | INFO     | preparing for final server update for job 6840430099 in state='finished'
[2025-10-12 15:34:46] 2025-10-12 21:33:42,778 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:34:46] 2025-10-12 21:33:42,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:34:46] 2025-10-12 21:33:42,778 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:34:46] 2025-10-12 21:33:42,778 | INFO     | job 6840430099 has finished - writing final server update
[2025-10-12 15:34:46] 2025-10-12 21:33:42,778 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:34:46] 2025-10-12 21:33:42,778 | INFO     | executing command: lscpu
[2025-10-12 15:34:46] 2025-10-12 21:33:42,793 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:34:46] 2025-10-12 21:33:43,075 | INFO     | time since job start (2346s) is within the limit (172800.0s)
[2025-10-12 15:34:46] 2025-10-12 21:33:44,139 | INFO     | PID=2140107 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:34:46] 2025-10-12 21:33:44,139 | INFO     | .. there are 2 such processes running
[2025-10-12 15:34:46] 2025-10-12 21:33:44,655 | INFO     | monitor loop #183: job 0:6840430099 is in state 'finished'
[2025-10-12 15:34:46] 2025-10-12 21:33:44,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:34:46] 2025-10-12 21:33:44,964 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 15:34:46] 2025-10-12 21:33:44,966 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4195.163656249999
[2025-10-12 15:34:46] 2025-10-12 21:33:44,968 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6840430099/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:34:46] 2025-10-12 21:33:44,968 | INFO     | extracted standard info from prmon json
[2025-10-12 15:34:46] 2025-10-12 21:33:44,968 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:34:46] 2025-10-12 21:33:44,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:34:46] 2025-10-12 21:33:44,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:34:46] 2025-10-12 21:33:44,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:34:46] 2025-10-12 21:33:44,968 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | sum of square deviations: 10150888.0
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | sum of deviations: -1469052874.0
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | mean x: 1760303746.5
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | mean y: 2617096.5
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | -- intersect: 254756612797.05276
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | intersect: 254756612797.05276
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | chi2: 0.01509404365047841
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | -- intersect: 254756612797.05276
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | current memory leak: -144.72 B/s (using 32 data points, chi2=0.02)
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | could have reported an average CPU frequency of 4237 MHz (5 samples)
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | ..............................
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | . Timing measurements:
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | . get job = 0 s
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | . initial setup = 5 s
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | . payload setup = 3 s
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | . stage-in = 0 s
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | . payload execution = 2322 s
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | . stage-out = 0 s
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | . log creation = 0 s
[2025-10-12 15:34:46] 2025-10-12 21:33:44,969 | INFO     | ..............................
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | 
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | job summary report
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | --------------------------------------------------
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | PanDA job id: 6840430099
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | task id: 46676269
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | errors: (none)
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | pilot state: finished 
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | transexitcode: 0
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | exeerrorcode: 0
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | exeerrordiag: 
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | exitcode: 0
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | exitmsg: OK
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | cpuconsumptiontime: 16977 s
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | nevents: 400
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | neventsw: 0
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | pid: 2146772
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | pgrp: 2146772
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | corecount: 8
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | event service: False
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | sizes: {0: 2348813, 2: 2349075, 11: 2349103, 2329: 2374298, 2330: 2383310, 2331: 2383366, 2335: 2383720}
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | --------------------------------------------------
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | 
[2025-10-12 15:34:46] 2025-10-12 21:33:44,993 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | job 6840430099 has completed (purged errors)
[2025-10-12 15:34:46] 2025-10-12 21:33:45,009 | INFO     | overall cleanup function is called
[2025-10-12 15:34:46] 2025-10-12 21:33:46,016 | INFO     | --- collectZombieJob: --- 10, [2146772]
[2025-10-12 15:34:46] 2025-10-12 21:33:46,016 | INFO     | zombie collector waiting for pid 2146772
[2025-10-12 15:34:46] 2025-10-12 21:33:46,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:34:46] 2025-10-12 21:33:46,016 | INFO     | collected zombie processes
[2025-10-12 15:34:46] 2025-10-12 21:33:46,016 | INFO     | will attempt to kill all subprocesses of pid=2146772
[2025-10-12 15:34:46] 2025-10-12 21:33:46,074 | INFO     | process IDs to be killed: [2146772] (in reverse order)
[2025-10-12 15:34:46] 2025-10-12 21:33:46,122 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:34:46] 2025-10-12 21:33:46,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:34:46] 2025-10-12 21:33:46,124 | INFO     | did not find any defunct processes belonging to 2146772
[2025-10-12 15:34:46] 2025-10-12 21:33:46,126 | INFO     | did not find any defunct processes belonging to 2146772
[2025-10-12 15:34:46] 2025-10-12 21:33:46,127 | INFO     | ready for new job
[2025-10-12 15:34:46] 2025-10-12 21:33:46,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:34:46] 2025-10-12 21:33:46,127 | INFO     | ***************************************
[2025-10-12 15:34:46] 2025-10-12 21:33:46,127 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:34:46] 2025-10-12 21:33:46,127 | INFO     | ***************************************
[2025-10-12 15:34:46] 2025-10-12 21:33:46,127 | INFO     | 
[2025-10-12 15:34:46] 2025-10-12 21:33:46,128 | INFO     | architecture information:
[2025-10-12 15:34:46] 2025-10-12 21:33:46,128 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:34:46] 2025-10-12 21:33:46,138 | INFO     | cat /etc/os-release:
[2025-10-12 15:34:46] NAME="CentOS Linux"
[2025-10-12 15:34:46] VERSION="7 (Core)"
[2025-10-12 15:34:46] ID="centos"
[2025-10-12 15:34:46] ID_LIKE="rhel fedora"
[2025-10-12 15:34:46] VERSION_ID="7"
[2025-10-12 15:34:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:34:46] ANSI_COLOR="0;31"
[2025-10-12 15:34:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:34:46] HOME_URL="https://www.centos.org/"
[2025-10-12 15:34:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:34:46] 
[2025-10-12 15:34:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:34:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:34:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:34:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:34:46] 
[2025-10-12 15:34:46] 2025-10-12 21:33:46,138 | INFO     | ***************************************
[2025-10-12 15:34:46] 2025-10-12 21:33:46,640 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-12 15:34:46] 2025-10-12 21:33:46,653 | INFO     | sufficient remaining disk space (190739120128 B)
[2025-10-12 15:34:46] 2025-10-12 21:33:46,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:34:46] 2025-10-12 21:33:46,653 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:34:46] 2025-10-12 21:33:46,653 | INFO     | update_server=False
[2025-10-12 15:34:46] 2025-10-12 21:33:46,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:34:46] 2025-10-12 21:33:46,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:34:46] 2025-10-12 21:33:46,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:34:46] 2025-10-12 21:33:46,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:34:46] 2025-10-12 21:33:46,654 | INFO     | aborting loop
[2025-10-12 15:34:46] 2025-10-12 21:33:46,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:34:46] 2025-10-12 21:33:47,108 | INFO     | all data control threads have been joined
[2025-10-12 15:34:46] 2025-10-12 21:33:47,291 | INFO     | all payload control threads have been joined
[2025-10-12 15:34:46] 2025-10-12 21:33:47,394 | INFO     | all job control threads have been joined
[2025-10-12 15:34:46] 2025-10-12 21:33:47,656 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:47,659 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:47,659 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,014 | INFO     | [job] validate thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,029 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,093 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,113 | INFO     | [data] control thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,199 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,294 | INFO     | [payload] control thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,399 | INFO     | [job] control thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,526 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,659 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:48,909 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:49,118 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:50,862 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:33:57,007 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:34:46] 2025-10-12 21:33:58,012 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:34:46] 2025-10-12 21:34:16,276 | INFO     | PID=2140107 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:34:46] 2025-10-12 21:34:16,277 | INFO     | .. there are 2 such processes running
[2025-10-12 15:34:46] 2025-10-12 21:34:16,277 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:34:46] 2025-10-12 21:34:16,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:34:46] 2025-10-12 21:34:16,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:34:46] 2025-10-12 21:34:40,625 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:34:46] 2025-10-12 21:34:41,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137855184168768)>', '<ExcThread(monitor, started 137854772578048)>']
[2025-10-12 15:34:46] 2025-10-12 21:34:41,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:34:46] 2025-10-12 21:34:41,396 | INFO     | [monitor] control thread has ended
[2025-10-12 15:34:46] 2025-10-12 21:34:46,319 | INFO     | all workflow threads have been joined
[2025-10-12 15:34:46] 2025-10-12 21:34:46,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:34:46] 2025-10-12 21:34:46,319 | INFO     | traces error code: 0
[2025-10-12 15:34:46] 2025-10-12 21:34:46,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:34:46] 2025-10-12 21:34:46,391 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:34:46] 2025-10-12 21:34:46,393 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:34:46] 2025-10-12 21:34:46,397 [wrapper] pilotpid: 2140107
[2025-10-12 15:34:46] 2025-10-12 21:34:46,398 [wrapper] Pilot exit status: 0
[2025-10-12 15:34:46] 2025-10-12 21:34:46,403 [wrapper] pandaids: 6840430099
[2025-10-12 15:34:46] 2025-10-12 21:34:46,432 [wrapper] cleanup supervisor_pilot 2156356 2140108
[2025-10-12 15:34:46] 2025-10-12 21:34:46,434 [wrapper] Test setup, not cleaning
[2025-10-12 15:34:46] 2025-10-12 21:34:46,437 [wrapper] apfmon messages muted
[2025-10-12 15:34:46] 2025-10-12 21:34:46,438 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:34:46] 2025-10-12 21:34:46,439 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:34:46]  *** Error codes and diagnostics ***
[2025-10-12 15:34:46]     "exeErrorCode": 0,
[2025-10-12 15:34:46]     "exeErrorDiag": "",
[2025-10-12 15:34:46]     "pilotErrorCode": 0,
[2025-10-12 15:34:46]     "pilotErrorDiag": "",
[2025-10-12 15:34:46]  *** Listing of results directory ***
[2025-10-12 15:34:46] total 408360
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:32 pilot3.tar.gz
[2025-10-12 15:34:46] -rwx------ 1 boinc boinc     36292 Oct 12 11:36 runpilot2-wrapper.sh
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc      5112 Oct 12 11:36 queuedata.json
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:34:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:54 run_atlas
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:54 job.xml
[2025-10-12 15:34:46] -rw-r--r-- 2 boinc boinc 220206102 Oct 12 14:54 EVNT.46676267._002504.pool.root.1
[2025-10-12 15:34:46] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:54 start_atlas.sh
[2025-10-12 15:34:46] drwxrwx--x 2 boinc boinc      4096 Oct 12 14:54 shared
[2025-10-12 15:34:46] -rw-r--r-- 2 boinc boinc    569681 Oct 12 14:54 input.tar.gz
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc      9979 Oct 12 14:54 init_data.xml
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:54 boinc_lockfile
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc      2549 Oct 12 14:54 pandaJob.out
[2025-10-12 15:34:46] -rw------- 1 boinc boinc    975536 Oct 12 14:54 agis_schedconf.cvmfs.json
[2025-10-12 15:34:46] -rw------- 1 boinc boinc   1560580 Oct 12 14:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:34:46] drwx------ 5 boinc boinc      4096 Oct 12 14:54 pilot3
[2025-10-12 15:34:46] -rw------- 1 boinc boinc 192707117 Oct 12 15:33 HITS.46676269._085055.pool.root.1
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc       529 Oct 12 15:33 boinc_task_state.xml
[2025-10-12 15:34:46] -rw------- 1 boinc boinc      1036 Oct 12 15:33 memory_monitor_summary.json
[2025-10-12 15:34:46] -rw------- 1 boinc boinc    286585 Oct 12 15:33 log.46676269._085055.job.log.tgz.1
[2025-10-12 15:34:46] -rw------- 1 boinc boinc      7742 Oct 12 15:33 heartbeat.json
[2025-10-12 15:34:46] -rw------- 1 boinc boinc        95 Oct 12 15:34 pilot_heartbeat.json
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:34 boinc_mmap_file
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc        27 Oct 12 15:34 wrapper_checkpoint.txt
[2025-10-12 15:34:46] -rw------- 1 boinc boinc      4903 Oct 12 15:34 pilotlog.txt
[2025-10-12 15:34:46] -rw------- 1 boinc boinc    382471 Oct 12 15:34 log.46676269._085055.job.log.1
[2025-10-12 15:34:46] -rw------- 1 boinc boinc       357 Oct 12 15:34 output.list
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc       620 Oct 12 15:34 runtime_log
[2025-10-12 15:34:46] -rw------- 1 boinc boinc    686080 Oct 12 15:34 result.tar.gz
[2025-10-12 15:34:46] -rw------- 1 boinc boinc       653 Oct 12 15:34 s6JNDmIBFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjYUMDmtV97Fn.diag
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc      8794 Oct 12 15:34 runtime_log.err
[2025-10-12 15:34:46] -rw-r--r-- 1 boinc boinc     22015 Oct 12 15:34 stderr.txt
[2025-10-12 15:34:46] HITS file was successfully produced:
[2025-10-12 15:34:46] -rw------- 1 boinc boinc 192707117 Oct 12 15:33 shared/HITS.pool.root.1
[2025-10-12 15:34:46]  *** Contents of shared directory: ***
[2025-10-12 15:34:46] total 404496
[2025-10-12 15:34:46] -rw-r--r-- 2 boinc boinc 220206102 Oct 12 14:54 ATLAS.root_0
[2025-10-12 15:34:46] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:54 start_atlas.sh
[2025-10-12 15:34:46] -rw-r--r-- 2 boinc boinc    569681 Oct 12 14:54 input.tar.gz
[2025-10-12 15:34:46] -rw------- 1 boinc boinc 192707117 Oct 12 15:33 HITS.pool.root.1
[2025-10-12 15:34:46] -rw------- 1 boinc boinc    686080 Oct 12 15:34 result.tar.gz
15:34:47 (2136263): run_atlas exited; CPU time 16978.674155
15:34:47 (2136263): called boinc_finish(0)

</stderr_txt>
]]>

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