Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:01:40 (3669766): wrapper (7.7.26015): starting
15:01:40 (3669766): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 15:01:40] Arguments: --nthreads 12
[2025-10-12 15:01:40] Threads: 12
[2025-10-12 15:01:40] Checking for CVMFS
[2025-10-12 15:01:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:01:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:01:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:01:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:01:42] 2.13.2.0 3836034 138594 889712 151633 1 87 28298335 40960001 56355 16776704 213 390886097 99.784 224154552 18959 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:01:42] CVMFS is ok
[2025-10-12 15:01:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:01:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:01:42] Further information can be found at the LHC@home message board.
[2025-10-12 15:01:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:01:42] Checking for apptainer binary...
[2025-10-12 15:01:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:01:42] Running /usr/bin/apptainer --version
[2025-10-12 15:01:42] apptainer version 1.4.3-1.el9
[2025-10-12 15:01:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:01:42] lc-12-9.aglt2.org
[2025-10-12 15:01:42] apptainer works
[2025-10-12 15:01:42] Set ATHENA_PROC_NUMBER=12
[2025-10-12 15:01:42] Set ATHENA_CORE_NUMBER=12
[2025-10-12 15:01:42] Starting ATLAS job with PandaID=6840430095
[2025-10-12 15:01:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:45:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:45:44] 2025-10-12 23:44:41,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:45:44] 2025-10-12 23:44:41,392 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:45:44] 2025-10-12 23:44:41,393 | INFO     | sum of square deviations: 6519479664.159393
[2025-10-12 19:45:44] 2025-10-12 23:44:41,401 | INFO     | sum of deviations: 67530496898.18113
[2025-10-12 19:45:44] 2025-10-12 23:44:41,401 | INFO     | mean x: 1760304191.731884
[2025-10-12 19:45:44] 2025-10-12 23:44:41,401 | INFO     | mean y: 2291913.7862318843
[2025-10-12 19:45:44] 2025-10-12 23:44:41,402 | INFO     | -- intersect: -18231405080.946644
[2025-10-12 19:45:44] 2025-10-12 23:44:41,402 | INFO     | intersect: -18231405080.946644
[2025-10-12 19:45:44] 2025-10-12 23:44:41,402 | INFO     | chi2: 2.107315441700154
[2025-10-12 19:45:44] 2025-10-12 23:44:41,403 | INFO     | sum of square deviations: 6171567078.88562
[2025-10-12 19:45:44] 2025-10-12 23:44:41,411 | INFO     | sum of deviations: 69165957204.38004
[2025-10-12 19:45:44] 2025-10-12 23:44:41,411 | INFO     | mean x: 1760304039.2361624
[2025-10-12 19:45:44] 2025-10-12 23:44:41,411 | INFO     | mean y: 2292624.6346863466
[2025-10-12 19:45:44] 2025-10-12 23:44:41,411 | INFO     | -- intersect: -19725778428.99636
[2025-10-12 19:45:44] 2025-10-12 23:44:41,411 | INFO     | intersect: -19725778428.99636
[2025-10-12 19:45:44] 2025-10-12 23:44:41,412 | INFO     | chi2: 2.0985208573765237
[2025-10-12 19:45:44] 2025-10-12 23:44:41,412 | INFO     | current chi2=2.0985208573765237 (change=0.41733592178943013 %)
[2025-10-12 19:45:44] 2025-10-12 23:44:41,412 | INFO     | right removable region: 270
[2025-10-12 19:45:44] 2025-10-12 23:44:41,412 | INFO     | sum of square deviations: 6171528038.885623
[2025-10-12 19:45:44] 2025-10-12 23:44:41,425 | INFO     | sum of deviations: 12274984074.793354
[2025-10-12 19:45:44] 2025-10-12 23:44:41,425 | INFO     | mean x: 1760304344.2361624
[2025-10-12 19:45:44] 2025-10-12 23:44:41,425 | INFO     | mean y: 2316038.878228782
[2025-10-12 19:45:44] 2025-10-12 23:44:41,425 | INFO     | -- intersect: -3498876478.7839127
[2025-10-12 19:45:44] 2025-10-12 23:44:41,425 | INFO     | intersect: -3498876478.7839127
[2025-10-12 19:45:44] 2025-10-12 23:44:41,426 | INFO     | chi2: 0.14324724955696763
[2025-10-12 19:45:44] 2025-10-12 23:44:41,426 | INFO     | current chi2=0.14324724955696763 (change=93.20238220048358 %)
[2025-10-12 19:45:44] 2025-10-12 23:44:41,426 | INFO     | sum of square deviations: 5836197587.5789385
[2025-10-12 19:45:44] 2025-10-12 23:44:41,437 | INFO     | sum of deviations: 4974087864.315786
[2025-10-12 19:45:44] 2025-10-12 23:44:41,437 | INFO     | mean x: 1760304496.7368422
[2025-10-12 19:45:44] 2025-10-12 23:44:41,437 | INFO     | mean y: 2319316.2330827066
[2025-10-12 19:45:44] 2025-10-12 23:44:41,438 | INFO     | -- intersect: -1497957037.2190793
[2025-10-12 19:45:44] 2025-10-12 23:44:41,438 | INFO     | intersect: -1497957037.2190793
[2025-10-12 19:45:44] 2025-10-12 23:44:41,438 | INFO     | chi2: 0.06107329709169161
[2025-10-12 19:45:44] 2025-10-12 23:44:41,438 | INFO     | current chi2=0.06107329709169161 (change=57.36511711004718 %)
[2025-10-12 19:45:44] 2025-10-12 23:44:41,439 | INFO     | sum of square deviations: 5513239461.272011
[2025-10-12 19:45:44] 2025-10-12 23:44:41,440 | INFO     | sum of deviations: 6299881238.789274
[2025-10-12 19:45:44] 2025-10-12 23:44:41,441 | INFO     | mean x: 1760304649.2375479
[2025-10-12 19:45:44] 2025-10-12 23:44:41,441 | INFO     | mean y: 2318688.858237548
[2025-10-12 19:45:44] 2025-10-12 23:44:41,441 | INFO     | -- intersect: -2009150305.4028158
[2025-10-12 19:45:44] 2025-10-12 23:44:41,441 | INFO     | intersect: -2009150305.4028158
[2025-10-12 19:45:44] 2025-10-12 23:44:41,451 | INFO     | chi2: 0.05923395265686301
[2025-10-12 19:45:44] 2025-10-12 23:44:41,452 | INFO     | current chi2=0.05923395265686301 (change=3.0116999121025465 %)
[2025-10-12 19:45:44] 2025-10-12 23:44:41,452 | INFO     | left removable region: 30
[2025-10-12 19:45:44] 2025-10-12 23:44:41,452 | INFO     | sum of square deviations: 4286668600.495818
[2025-10-12 19:45:44] 2025-10-12 23:44:41,454 | INFO     | sum of deviations: 11299850752.04167
[2025-10-12 19:45:44] 2025-10-12 23:44:41,454 | INFO     | mean x: 1760304923.7541666
[2025-10-12 19:45:44] 2025-10-12 23:44:41,454 | INFO     | mean y: 2318366.4583333335
[2025-10-12 19:45:44] 2025-10-12 23:44:41,454 | INFO     | -- intersect: -4637924388.534544
[2025-10-12 19:45:44] 2025-10-12 23:44:41,454 | INFO     | intersect: -4637924388.534544
[2025-10-12 19:45:44] 2025-10-12 23:44:41,455 | INFO     | chi2: 0.044917180591320556
[2025-10-12 19:45:44] 2025-10-12 23:44:41,465 | INFO     | -- intersect: -4637924388.534544
[2025-10-12 19:45:44] 2025-10-12 23:44:41,465 | INFO     | current memory leak: 2.64 B/s (using 240 data points, chi2=0.04)
[2025-10-12 19:45:44] 2025-10-12 23:44:41,466 | INFO     | could have reported an average CPU frequency of 2752 MHz (13 samples)
[2025-10-12 19:45:44] 2025-10-12 23:44:41,466 | INFO     | ..............................
[2025-10-12 19:45:44] 2025-10-12 23:44:41,466 | INFO     | . Timing measurements:
[2025-10-12 19:45:44] 2025-10-12 23:44:41,466 | INFO     | . get job = 0 s
[2025-10-12 19:45:44] 2025-10-12 23:44:41,466 | INFO     | . initial setup = 3 s
[2025-10-12 19:45:44] 2025-10-12 23:44:41,467 | INFO     | . payload setup = 23 s
[2025-10-12 19:45:44] 2025-10-12 23:44:41,467 | INFO     | . stage-in = 0 s
[2025-10-12 19:45:44] 2025-10-12 23:44:41,467 | INFO     | . payload execution = 16849 s
[2025-10-12 19:45:44] 2025-10-12 23:44:41,467 | INFO     | . stage-out = 4 s
[2025-10-12 19:45:44] 2025-10-12 23:44:41,467 | INFO     | . log creation = 0 s
[2025-10-12 19:45:44] 2025-10-12 23:44:41,467 | INFO     | ..............................
[2025-10-12 19:45:44] 2025-10-12 23:44:41,878 | INFO     | 
[2025-10-12 19:45:44] 2025-10-12 23:44:41,902 | INFO     | job summary report
[2025-10-12 19:45:44] 2025-10-12 23:44:41,902 | INFO     | --------------------------------------------------
[2025-10-12 19:45:44] 2025-10-12 23:44:41,902 | INFO     | PanDA job id: 6840430095
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | task id: 46676269
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | errors: (none)
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | pilot state: finished 
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | transexitcode: 0
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | exeerrorcode: 0
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | exeerrordiag: 
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | exitcode: 0
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | exitmsg: OK
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | cpuconsumptiontime: 42689 s
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | nevents: 400
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | neventsw: 0
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | pid: 3721277
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | pgrp: 3721277
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | corecount: 12
[2025-10-12 19:45:44] 2025-10-12 23:44:41,903 | INFO     | event service: False
[2025-10-12 19:45:44] 2025-10-12 23:44:41,904 | INFO     | sizes: {0: 2348756, 11: 2348756, 15: 2349046, 22: 2349074, 16878: 2380504, 16879: 2380503, 16885: 2389685, 16886: 2389741, 16917: 2389935}
[2025-10-12 19:45:44] 2025-10-12 23:44:41,904 | INFO     | --------------------------------------------------
[2025-10-12 19:45:44] 2025-10-12 23:44:41,904 | INFO     | 
[2025-10-12 19:45:44] 2025-10-12 23:44:41,904 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | job 6840430095 has completed (purged errors)
[2025-10-12 19:45:44] 2025-10-12 23:44:41,998 | INFO     | overall cleanup function is called
[2025-10-12 19:45:44] 2025-10-12 23:44:43,009 | INFO     | --- collectZombieJob: --- 10, [3721277]
[2025-10-12 19:45:44] 2025-10-12 23:44:43,009 | INFO     | zombie collector waiting for pid 3721277
[2025-10-12 19:45:44] 2025-10-12 23:44:43,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:45:44] 2025-10-12 23:44:43,009 | INFO     | collected zombie processes
[2025-10-12 19:45:44] 2025-10-12 23:44:43,010 | INFO     | will attempt to kill all subprocesses of pid=3721277
[2025-10-12 19:45:44] 2025-10-12 23:44:45,097 | INFO     | process IDs to be killed: [3721277] (in reverse order)
[2025-10-12 19:45:44] 2025-10-12 23:44:45,340 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:45:44] 2025-10-12 23:44:45,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:45:44] 2025-10-12 23:44:45,403 | INFO     | did not find any defunct processes belonging to 3721277
[2025-10-12 19:45:44] 2025-10-12 23:44:45,468 | INFO     | did not find any defunct processes belonging to 3721277
[2025-10-12 19:45:44] 2025-10-12 23:44:45,469 | INFO     | ready for new job
[2025-10-12 19:45:44] 2025-10-12 23:44:45,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:45:44] 2025-10-12 23:44:45,482 | INFO     | ***************************************
[2025-10-12 19:45:44] 2025-10-12 23:44:45,482 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:45:44] 2025-10-12 23:44:45,482 | INFO     | ***************************************
[2025-10-12 19:45:44] 2025-10-12 23:44:45,482 | INFO     | 
[2025-10-12 19:45:44] 2025-10-12 23:44:45,524 | INFO     | architecture information:
[2025-10-12 19:45:44] 2025-10-12 23:44:45,545 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:45:44] 2025-10-12 23:44:45,632 | INFO     | cat /etc/os-release:
[2025-10-12 19:45:44] NAME="CentOS Linux"
[2025-10-12 19:45:44] VERSION="7 (Core)"
[2025-10-12 19:45:44] ID="centos"
[2025-10-12 19:45:44] ID_LIKE="rhel fedora"
[2025-10-12 19:45:44] VERSION_ID="7"
[2025-10-12 19:45:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:45:44] ANSI_COLOR="0;31"
[2025-10-12 19:45:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:45:44] HOME_URL="https://www.centos.org/"
[2025-10-12 19:45:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:45:44] 
[2025-10-12 19:45:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:45:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:45:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:45:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:45:44] 
[2025-10-12 19:45:44] 2025-10-12 23:44:45,633 | INFO     | ***************************************
[2025-10-12 19:45:44] 2025-10-12 23:44:46,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 19:45:44] 2025-10-12 23:44:46,194 | INFO     | sufficient remaining disk space (418721562624 B)
[2025-10-12 19:45:44] 2025-10-12 23:44:46,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:45:44] 2025-10-12 23:44:46,194 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:45:44] 2025-10-12 23:44:46,194 | INFO     | update_server=False
[2025-10-12 19:45:44] 2025-10-12 23:44:46,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:45:44] 2025-10-12 23:44:46,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:45:44] 2025-10-12 23:44:46,252 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 19:45:44] 2025-10-12 23:44:46,252 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 19:45:44] 2025-10-12 23:44:46,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:45:44] 2025-10-12 23:44:46,253 | INFO     | will abort loop
[2025-10-12 19:45:44] 2025-10-12 23:44:46,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:45:44] 2025-10-12 23:44:46,970 | INFO     | all data control threads have been joined
[2025-10-12 19:45:44] 2025-10-12 23:44:47,200 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,265 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,306 | INFO     | all job control threads have been joined
[2025-10-12 19:45:44] 2025-10-12 23:44:47,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,382 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,387 | INFO     | [job] validate thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,463 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,464 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,625 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,626 | INFO     | all payload control threads have been joined
[2025-10-12 19:45:44] 2025-10-12 23:44:47,715 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,821 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,842 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:47,975 | INFO     | [data] control thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:48,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:45:44] 2025-10-12 23:44:48,201 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:48,312 | INFO     | [job] control thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:48,631 | INFO     | [payload] control thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:44:52,054 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:45:44] 2025-10-12 23:45:15,449 | INFO     | PID=3681839 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:45:44] 2025-10-12 23:45:15,453 | INFO     | .. there are 72 such processes running
[2025-10-12 19:45:44] 2025-10-12 23:45:15,454 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:45:44] 2025-10-12 23:45:15,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:45:44] 2025-10-12 23:45:15,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:45:44] 2025-10-12 23:45:37,810 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:45:44] 2025-10-12 23:45:38,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976482072384)>', '<ExcThread(monitor, started 139975987287808)>']
[2025-10-12 19:45:44] 2025-10-12 23:45:38,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:45:44] 2025-10-12 23:45:38,620 | INFO     | [monitor] control thread has ended
[2025-10-12 19:45:44] 2025-10-12 23:45:43,304 | INFO     | all workflow threads have been joined
[2025-10-12 19:45:44] 2025-10-12 23:45:43,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:45:44] 2025-10-12 23:45:43,305 | INFO     | traces error code: 0
[2025-10-12 19:45:44] 2025-10-12 23:45:43,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:45:44] 2025-10-12 23:45:43,959 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:45:44] 2025-10-12 23:45:43,990 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:45:44] 2025-10-12 23:45:44,061 [wrapper] pilotpid: 3681839
[2025-10-12 19:45:44] 2025-10-12 23:45:44,081 [wrapper] Pilot exit status: 0
[2025-10-12 19:45:44] 2025-10-12 23:45:44,188 [wrapper] pandaids: 6840430095
[2025-10-12 19:45:44] 2025-10-12 23:45:44,430 [wrapper] cleanup supervisor_pilot  808481 3681840
[2025-10-12 19:45:44] 2025-10-12 23:45:44,437 [wrapper] Test setup, not cleaning
[2025-10-12 19:45:44] 2025-10-12 23:45:44,447 [wrapper] apfmon messages muted
[2025-10-12 19:45:44] 2025-10-12 23:45:44,450 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:45:44] 2025-10-12 23:45:44,466 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:45:44]  *** Error codes and diagnostics ***
[2025-10-12 19:45:44]     "exeErrorCode": 0,
[2025-10-12 19:45:44]     "exeErrorDiag": "",
[2025-10-12 19:45:44]     "pilotErrorCode": 0,
[2025-10-12 19:45:44]     "pilotErrorDiag": "",
[2025-10-12 19:45:44]  *** Listing of results directory ***
[2025-10-12 19:45:44] total 418720
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 19:45:44] -rwx------. 1 boincer umatlas     36292 Oct 12 13:36 runpilot2-wrapper.sh
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:36 queuedata.json
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:45:44] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:01 run_atlas
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:01 job.xml
[2025-10-12 19:45:44] -rw-r--r--. 2 boincer umatlas 221474153 Oct 12 15:01 EVNT.46676267._001556.pool.root.1
[2025-10-12 19:45:44] drwxrwx--x. 2 boincer umatlas        68 Oct 12 15:01 shared
[2025-10-12 19:45:44] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:01 input.tar.gz
[2025-10-12 19:45:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:01 start_atlas.sh
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:01 boinc_lockfile
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 15:01 pandaJob.out
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas    975528 Oct 12 15:02 agis_schedconf.cvmfs.json
[2025-10-12 19:45:44] drwx------. 5 boincer umatlas      4096 Oct 12 15:02 pilot3
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas      6796 Oct 12 19:36 init_data.xml
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas 198541045 Oct 12 19:43 HITS.46676269._085051.pool.root.1
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas       531 Oct 12 19:43 boinc_task_state.xml
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas      1041 Oct 12 19:43 memory_monitor_summary.json
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas    529167 Oct 12 19:44 log.46676269._085051.job.log.tgz.1
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas        95 Oct 12 19:44 pilot_heartbeat.json
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas      7828 Oct 12 19:44 heartbeat.json
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas      5011 Oct 12 19:45 pilotlog.txt
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:45 boinc_mmap_file
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas   1897099 Oct 12 19:45 log.46676269._085051.job.log.1
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas       357 Oct 12 19:45 output.list
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:45 runtime_log
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas   2447360 Oct 12 19:45 result.tar.gz
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 19:45 runtime_log.err
[2025-10-12 19:45:44] -rw-------. 1 boincer umatlas       654 Oct 12 19:45 jQvMDmIBFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfYUMDmtODybn.diag
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas        28 Oct 12 19:45 wrapper_checkpoint.txt
[2025-10-12 19:45:44] -rw-r--r--. 1 boincer umatlas     21057 Oct 12 19:45 stderr.txt
[2025-10-12 19:45:45] HITS file was successfully produced:
[2025-10-12 19:45:45] -rw-------. 1 boincer umatlas 198541045 Oct 12 19:43 shared/HITS.pool.root.1
[2025-10-12 19:45:45]  *** Contents of shared directory: ***
[2025-10-12 19:45:45] total 413144
[2025-10-12 19:45:45] -rw-r--r--. 2 boincer umatlas 221474153 Oct 12 15:01 ATLAS.root_0
[2025-10-12 19:45:45] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:01 input.tar.gz
[2025-10-12 19:45:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:01 start_atlas.sh
[2025-10-12 19:45:45] -rw-------. 1 boincer umatlas 198541045 Oct 12 19:43 HITS.pool.root.1
[2025-10-12 19:45:45] -rw-------. 1 boincer umatlas   2447360 Oct 12 19:45 result.tar.gz
19:45:46 (3669766): run_atlas exited; CPU time 43612.108832
19:45:46 (3669766): called boinc_finish(0)

</stderr_txt>
]]>

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