Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:28:06 (3538049): wrapper (7.7.26015): starting
15:28:06 (3538049): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 15:28:06] Arguments: --nthreads 10
[2025-10-12 15:28:06] Threads: 10
[2025-10-12 15:28:06] Checking for CVMFS
[2025-10-12 15:28:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:28:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:28:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:28:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:28:08] 2.13.2.0 7513 78001 130260 151633 2 832 40743103 40960000 32609 16776704 0 467963912 99.757 291176694 46114 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:28:08] CVMFS is ok
[2025-10-12 15:28:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:28:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:28:08] Further information can be found at the LHC@home message board.
[2025-10-12 15:28:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:28:08] Checking for apptainer binary...
[2025-10-12 15:28:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:28:08] Running /usr/bin/apptainer --version
[2025-10-12 15:28:08] apptainer version 1.4.3-1.el9
[2025-10-12 15:28:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:28:08] c-208-40.aglt2.org
[2025-10-12 15:28:08] apptainer works
[2025-10-12 15:28:08] Set ATHENA_PROC_NUMBER=10
[2025-10-12 15:28:08] Set ATHENA_CORE_NUMBER=10
[2025-10-12 15:28:09] Starting ATLAS job with PandaID=6840429909
[2025-10-12 15:28:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:30:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:30:16] 2025-10-12 20:29:23,664 | INFO     | preparing for final server update for job 6840429909 in state='finished'
[2025-10-12 16:30:16] 2025-10-12 20:29:23,665 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:30:16] 2025-10-12 20:29:23,665 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:30:16] 2025-10-12 20:29:23,665 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:30:16] 2025-10-12 20:29:23,665 | INFO     | job 6840429909 has finished - writing final server update
[2025-10-12 16:30:16] 2025-10-12 20:29:23,665 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:30:16] 2025-10-12 20:29:23,665 | INFO     | executing command: lscpu
[2025-10-12 16:30:16] 2025-10-12 20:29:23,883 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:30:16] 2025-10-12 20:29:24,776 | INFO     | time since job start (3626s) is within the limit (172800.0s)
[2025-10-12 16:30:16] 2025-10-12 20:29:24,904 | INFO     | monitor loop #260: job 0:6840429909 is in state 'finished'
[2025-10-12 16:30:16] 2025-10-12 20:29:24,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:30:16] 2025-10-12 20:29:26,785 | INFO     | time since job start (3628s) is within the limit (172800.0s)
[2025-10-12 16:30:16] 2025-10-12 20:29:27,418 | INFO     | monitor loop #261: job 0:6840429909 is in state 'finished'
[2025-10-12 16:30:16] 2025-10-12 20:29:27,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:30:16] 2025-10-12 20:29:28,792 | INFO     | time since job start (3630s) is within the limit (172800.0s)
[2025-10-12 16:30:16] 2025-10-12 20:29:29,923 | INFO     | monitor loop #262: job 0:6840429909 is in state 'finished'
[2025-10-12 16:30:16] 2025-10-12 20:29:29,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:30:16] 2025-10-12 20:29:30,799 | INFO     | time since job start (3632s) is within the limit (172800.0s)
[2025-10-12 16:30:16] 2025-10-12 20:29:32,427 | INFO     | monitor loop #263: job 0:6840429909 is in state 'finished'
[2025-10-12 16:30:16] 2025-10-12 20:29:32,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:30:16] 2025-10-12 20:29:32,806 | INFO     | time since job start (3634s) is within the limit (172800.0s)
[2025-10-12 16:30:16] 2025-10-12 20:29:34,814 | INFO     | time since job start (3636s) is within the limit (172800.0s)
[2025-10-12 16:30:16] 2025-10-12 20:29:34,932 | INFO     | monitor loop #264: job 0:6840429909 is in state 'finished'
[2025-10-12 16:30:16] 2025-10-12 20:29:34,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:30:16] 2025-10-12 20:29:36,821 | INFO     | time since job start (3638s) is within the limit (172800.0s)
[2025-10-12 16:30:16] 2025-10-12 20:29:37,437 | INFO     | monitor loop #265: job 0:6840429909 is in state 'finished'
[2025-10-12 16:30:16] 2025-10-12 20:29:37,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:30:16] 2025-10-12 20:29:38,828 | INFO     | time since job start (3640s) is within the limit (172800.0s)
[2025-10-12 16:30:16] 2025-10-12 20:29:39,941 | INFO     | monitor loop #266: job 0:6840429909 is in state 'finished'
[2025-10-12 16:30:16] 2025-10-12 20:29:39,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:30:16] 2025-10-12 20:29:40,835 | INFO     | time since job start (3642s) is within the limit (172800.0s)
[2025-10-12 16:30:16] 2025-10-12 20:29:42,446 | INFO     | monitor loop #267: job 0:6840429909 is in state 'finished'
[2025-10-12 16:30:16] 2025-10-12 20:29:42,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:30:16] 2025-10-12 20:29:42,646 | INFO     | PID=3542359 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:30:16] 2025-10-12 20:29:42,646 | INFO     | .. there are 30 such processes running
[2025-10-12 16:30:16] 2025-10-12 20:29:43,305 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 16:30:16] 2025-10-12 20:29:43,326 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3790.9696562499985
[2025-10-12 16:30:16] 2025-10-12 20:29:43,392 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6840429909/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:30:16] 2025-10-12 20:29:43,392 | INFO     | extracted standard info from prmon json
[2025-10-12 16:30:16] 2025-10-12 20:29:43,392 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:30:16] 2025-10-12 20:29:43,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:30:16] 2025-10-12 20:29:43,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:30:16] 2025-10-12 20:29:43,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:30:16] 2025-10-12 20:29:43,407 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | sum of square deviations: 41117050.0
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | sum of deviations: 969405595.0
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | mean x: 1760299252.0
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | mean y: 2613673.2156862747
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | -- intersect: -41499486885.14429
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | intersect: -41499486885.14429
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | chi2: 0.2503955600201315
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | -- intersect: -41499486885.14429
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | current memory leak: 23.58 B/s (using 51 data points, chi2=0.25)
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | could have reported an average CPU frequency of 3792 MHz (5 samples)
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | ..............................
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | . Timing measurements:
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | . get job = 0 s
[2025-10-12 16:30:16] 2025-10-12 20:29:43,408 | INFO     | . initial setup = 3 s
[2025-10-12 16:30:16] 2025-10-12 20:29:43,409 | INFO     | . payload setup = 25 s
[2025-10-12 16:30:16] 2025-10-12 20:29:43,409 | INFO     | . stage-in = 0 s
[2025-10-12 16:30:16] 2025-10-12 20:29:43,409 | INFO     | . payload execution = 3552 s
[2025-10-12 16:30:16] 2025-10-12 20:29:43,409 | INFO     | . stage-out = 0 s
[2025-10-12 16:30:16] 2025-10-12 20:29:43,409 | INFO     | . log creation = 0 s
[2025-10-12 16:30:16] 2025-10-12 20:29:43,409 | INFO     | ..............................
[2025-10-12 16:30:16] 2025-10-12 20:29:43,530 | INFO     | 
[2025-10-12 16:30:16] 2025-10-12 20:29:43,530 | INFO     | job summary report
[2025-10-12 16:30:16] 2025-10-12 20:29:43,530 | INFO     | --------------------------------------------------
[2025-10-12 16:30:16] 2025-10-12 20:29:43,530 | INFO     | PanDA job id: 6840429909
[2025-10-12 16:30:16] 2025-10-12 20:29:43,530 | INFO     | task id: 46676269
[2025-10-12 16:30:16] 2025-10-12 20:29:43,530 | INFO     | errors: (none)
[2025-10-12 16:30:16] 2025-10-12 20:29:43,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:30:16] 2025-10-12 20:29:43,530 | INFO     | pilot state: finished 
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | transexitcode: 0
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | exeerrorcode: 0
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | exeerrordiag: 
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | exitcode: 0
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | exitmsg: OK
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | cpuconsumptiontime: 23836 s
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | nevents: 400
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | neventsw: 0
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | pid: 3552985
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | pgrp: 3552985
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | corecount: 10
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | event service: False
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | sizes: {0: 2348023, 1: 2348879, 12: 2348879, 20: 2349169, 22: 2349197, 3580: 2375083, 3581: 2384081, 3583: 2384137, 3604: 2384363}
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | --------------------------------------------------
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | 
[2025-10-12 16:30:16] 2025-10-12 20:29:43,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 16:30:16] 2025-10-12 20:29:43,574 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,574 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | job 6840429909 has completed (purged errors)
[2025-10-12 16:30:16] 2025-10-12 20:29:43,575 | INFO     | overall cleanup function is called
[2025-10-12 16:30:16] 2025-10-12 20:29:44,583 | INFO     | --- collectZombieJob: --- 10, [3552985]
[2025-10-12 16:30:16] 2025-10-12 20:29:44,583 | INFO     | zombie collector waiting for pid 3552985
[2025-10-12 16:30:16] 2025-10-12 20:29:44,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:30:16] 2025-10-12 20:29:44,583 | INFO     | collected zombie processes
[2025-10-12 16:30:16] 2025-10-12 20:29:44,583 | INFO     | will attempt to kill all subprocesses of pid=3552985
[2025-10-12 16:30:16] 2025-10-12 20:29:45,378 | INFO     | process IDs to be killed: [3552985] (in reverse order)
[2025-10-12 16:30:16] 2025-10-12 20:29:45,695 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:30:16] 2025-10-12 20:29:45,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:30:16] 2025-10-12 20:29:45,717 | INFO     | did not find any defunct processes belonging to 3552985
[2025-10-12 16:30:16] 2025-10-12 20:29:45,742 | INFO     | did not find any defunct processes belonging to 3552985
[2025-10-12 16:30:16] 2025-10-12 20:29:45,742 | INFO     | ready for new job
[2025-10-12 16:30:16] 2025-10-12 20:29:45,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:30:16] 2025-10-12 20:29:45,744 | INFO     | ***************************************
[2025-10-12 16:30:16] 2025-10-12 20:29:45,744 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:30:16] 2025-10-12 20:29:45,744 | INFO     | ***************************************
[2025-10-12 16:30:16] 2025-10-12 20:29:45,744 | INFO     | 
[2025-10-12 16:30:16] 2025-10-12 20:29:45,772 | INFO     | architecture information:
[2025-10-12 16:30:16] 2025-10-12 20:29:45,779 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:30:16] 2025-10-12 20:29:45,822 | INFO     | cat /etc/os-release:
[2025-10-12 16:30:16] NAME="CentOS Linux"
[2025-10-12 16:30:16] VERSION="7 (Core)"
[2025-10-12 16:30:16] ID="centos"
[2025-10-12 16:30:16] ID_LIKE="rhel fedora"
[2025-10-12 16:30:16] VERSION_ID="7"
[2025-10-12 16:30:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:30:16] ANSI_COLOR="0;31"
[2025-10-12 16:30:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:30:16] HOME_URL="https://www.centos.org/"
[2025-10-12 16:30:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:30:16] 
[2025-10-12 16:30:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:30:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:30:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:30:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:30:16] 
[2025-10-12 16:30:16] 2025-10-12 20:29:45,822 | INFO     | ***************************************
[2025-10-12 16:30:16] 2025-10-12 20:29:46,326 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 16:30:16] 2025-10-12 20:29:46,352 | INFO     | sufficient remaining disk space (169687908352 B)
[2025-10-12 16:30:16] 2025-10-12 20:29:46,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:30:16] 2025-10-12 20:29:46,353 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:30:16] 2025-10-12 20:29:46,353 | INFO     | update_server=False
[2025-10-12 16:30:16] 2025-10-12 20:29:46,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:30:16] 2025-10-12 20:29:46,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:30:16] 2025-10-12 20:29:46,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:30:16] 2025-10-12 20:29:46,353 | INFO     | aborting loop
[2025-10-12 16:30:16] 2025-10-12 20:29:46,512 | INFO     | all data control threads have been joined
[2025-10-12 16:30:16] 2025-10-12 20:29:46,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:30:16] 2025-10-12 20:29:47,358 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:47,359 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:47,387 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:47,517 | INFO     | [data] control thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:47,627 | INFO     | all job control threads have been joined
[2025-10-12 16:30:16] 2025-10-12 20:29:47,687 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:47,730 | INFO     | all payload control threads have been joined
[2025-10-12 16:30:16] 2025-10-12 20:29:47,763 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:47,886 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:47,899 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:48,019 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:48,135 | INFO     | [job] validate thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:48,378 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:48,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:30:16] 2025-10-12 20:29:48,651 | INFO     | [job] control thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:48,736 | INFO     | [payload] control thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:49,573 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:50,921 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:29:56,478 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:30:16] 2025-10-12 20:29:57,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:30:16] 2025-10-12 20:30:03,805 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:30:16] 2025-10-12 20:30:03,919 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975495767872)>', '<ExcThread(monitor, started 139975223908096)>']
[2025-10-12 16:30:16] 2025-10-12 20:30:08,945 | INFO     | all workflow threads have been joined
[2025-10-12 16:30:16] 2025-10-12 20:30:08,945 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:30:16] 2025-10-12 20:30:08,945 | INFO     | traces error code: 0
[2025-10-12 16:30:16] 2025-10-12 20:30:08,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:30:16] 2025-10-12 20:30:15,202 | INFO     | PID=3542359 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:30:16] 2025-10-12 20:30:15,203 | INFO     | .. there are 30 such processes running
[2025-10-12 16:30:16] 2025-10-12 20:30:15,203 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:30:16] 2025-10-12 20:30:15,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:30:16] 2025-10-12 20:30:15,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:30:16] 2025-10-12 20:30:15,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:30:16] 2025-10-12 20:30:15,204 | INFO     | [monitor] control thread has ended
[2025-10-12 16:30:16] 2025-10-12 20:30:15,532 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:30:16] 2025-10-12 20:30:15,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:30:16] 2025-10-12 20:30:15,586 [wrapper] pilotpid: 3542359
[2025-10-12 16:30:16] 2025-10-12 20:30:15,595 [wrapper] Pilot exit status: 0
[2025-10-12 16:30:16] 2025-10-12 20:30:15,628 [wrapper] pandaids: 6840429909
[2025-10-12 16:30:16] 2025-10-12 20:30:15,721 [wrapper] cleanup supervisor_pilot 3760033 3542360
[2025-10-12 16:30:16] 2025-10-12 20:30:15,723 [wrapper] Test setup, not cleaning
[2025-10-12 16:30:16] 2025-10-12 20:30:15,725 [wrapper] apfmon messages muted
[2025-10-12 16:30:16] 2025-10-12 20:30:15,747 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:30:16] 2025-10-12 20:30:15,759 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:30:16]  *** Error codes and diagnostics ***
[2025-10-12 16:30:16]     "exeErrorCode": 0,
[2025-10-12 16:30:16]     "exeErrorDiag": "",
[2025-10-12 16:30:16]     "pilotErrorCode": 0,
[2025-10-12 16:30:16]     "pilotErrorDiag": "",
[2025-10-12 16:30:16]  *** Listing of results directory ***
[2025-10-12 16:30:16] total 418120
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:34 queuedata.json
[2025-10-12 16:30:16] -rwx------. 1 boincer umatlas     36292 Oct 12 13:34 runpilot2-wrapper.sh
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:30:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:28 run_atlas
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:28 job.xml
[2025-10-12 16:30:16] -rw-r--r--. 2 boincer umatlas 224567397 Oct 12 15:28 EVNT.46676267._002414.pool.root.1
[2025-10-12 16:30:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:28 start_atlas.sh
[2025-10-12 16:30:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:28 shared
[2025-10-12 16:30:16] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 15:28 input.tar.gz
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:28 boinc_lockfile
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 15:28 pandaJob.out
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas    975528 Oct 12 15:28 agis_schedconf.cvmfs.json
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:30:16] drwx------. 5 boincer umatlas      4096 Oct 12 15:28 pilot3
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 16:27 init_data.xml
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas 197967555 Oct 12 16:27 HITS.46676269._085022.pool.root.1
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas       529 Oct 12 16:27 boinc_task_state.xml
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas      1048 Oct 12 16:29 memory_monitor_summary.json
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas    326202 Oct 12 16:29 log.46676269._085022.job.log.tgz.1
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas      7805 Oct 12 16:29 heartbeat.json
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas        27 Oct 12 16:30 wrapper_checkpoint.txt
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:30 boinc_mmap_file
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas       823 Oct 12 16:30 pilotlog.txt
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas        95 Oct 12 16:30 pilot_heartbeat.json
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas    531754 Oct 12 16:30 log.46676269._085022.job.log.1
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas       357 Oct 12 16:30 output.list
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:30 runtime_log
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas    880640 Oct 12 16:30 result.tar.gz
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 16:30 runtime_log.err
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas       658 Oct 12 16:30 ItwKDmP9ES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvtkNDmyiJTUm.diag
[2025-10-12 16:30:16] -rw-r--r--. 1 boincer umatlas     22296 Oct 12 16:30 stderr.txt
[2025-10-12 16:30:16] HITS file was successfully produced:
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas 197967555 Oct 12 16:27 shared/HITS.pool.root.1
[2025-10-12 16:30:16]  *** Contents of shared directory: ***
[2025-10-12 16:30:16] total 414080
[2025-10-12 16:30:16] -rw-r--r--. 2 boincer umatlas 224567397 Oct 12 15:28 ATLAS.root_0
[2025-10-12 16:30:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:28 start_atlas.sh
[2025-10-12 16:30:16] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 15:28 input.tar.gz
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas 197967555 Oct 12 16:27 HITS.pool.root.1
[2025-10-12 16:30:16] -rw-------. 1 boincer umatlas    880640 Oct 12 16:30 result.tar.gz
16:30:17 (3538049): run_atlas exited; CPU time 23937.562476
16:30:17 (3538049): called boinc_finish(0)

</stderr_txt>
]]>

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