Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:26:17 (2740738): wrapper (7.7.26015): starting
06:26:17 (2740738): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 06:26:17] Arguments: --nthreads 2
[2025-10-13 06:26:17] Threads: 2
[2025-10-13 06:26:17] Checking for CVMFS
[2025-10-13 06:26:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:26:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:26:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:26:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:26:17] 2.9.2.0 1499568 5287 61468 151649 3 56 30377161 36864000 0 130560 0 3190411 99.988 183360 902 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 06:26:17] CVMFS is ok
[2025-10-13 06:26:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:26:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:26:17] Further information can be found at the LHC@home message board.
[2025-10-13 06:26:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:26:17] Checking for apptainer binary...
[2025-10-13 06:26:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:26:17] Running /usr/bin/apptainer --version
[2025-10-13 06:26:17] apptainer version 1.4.1-1.1
[2025-10-13 06:26:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:26:17] thA389
[2025-10-13 06:26:17] apptainer works
[2025-10-13 06:26:17] Set ATHENA_PROC_NUMBER=2
[2025-10-13 06:26:17] Set ATHENA_CORE_NUMBER=2
[2025-10-13 06:26:17] Starting ATLAS job with PandaID=6840181362
[2025-10-13 06:26:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:31:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:31:48] 2025-10-13 06:31:03,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:31:48] 2025-10-13 06:31:03,251 | INFO     | aborting loop
[2025-10-13 08:31:48] 2025-10-13 06:31:03,525 | INFO     | all payload control threads have been joined
[2025-10-13 08:31:48] 2025-10-13 06:31:03,776 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:03,777 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:03,900 | INFO     | [data] control thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:03,923 | INFO     | [job] control thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:03,929 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:04,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:31:48] 2025-10-13 06:31:04,197 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:04,257 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:04,322 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:04,531 | INFO     | [payload] control thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:04,617 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:04,872 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:04,903 | INFO     | [job] validate thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:04,962 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:05,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:31:48] 2025-10-13 06:31:06,064 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:09,652 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:12,984 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:31:48] 2025-10-13 06:31:13,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:31:48] 2025-10-13 06:31:41,888 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:31:48] 2025-10-13 06:31:43,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630157715264)>', '<ExcThread(monitor, started 139629277718272)>']
[2025-10-13 08:31:48] 2025-10-13 06:31:43,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:31:48] 2025-10-13 06:31:43,988 | INFO     | [monitor] control thread has ended
[2025-10-13 08:31:48] 2025-10-13 06:31:48,082 | INFO     | all workflow threads have been joined
[2025-10-13 08:31:48] 2025-10-13 06:31:48,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:31:48] 2025-10-13 06:31:48,083 | INFO     | traces error code: 0
[2025-10-13 08:31:48] 2025-10-13 06:31:48,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:31:48] 2025-10-13 06:31:48,124 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:31:48] 2025-10-13 06:31:48,126 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:31:48] 2025-10-13 06:31:48,129 [wrapper] pilotpid: 2744448
[2025-10-13 08:31:48] 2025-10-13 06:31:48,131 [wrapper] Pilot exit status: 0
[2025-10-13 08:31:48] 2025-10-13 06:31:48,137 [wrapper] pandaids: 6840181362
[2025-10-13 08:31:48] 2025-10-13 06:31:48,148 [wrapper] cleanup supervisor_pilot 2766349 2744449
[2025-10-13 08:31:48] 2025-10-13 06:31:48,150 [wrapper] Test setup, not cleaning
[2025-10-13 08:31:48] 2025-10-13 06:31:48,152 [wrapper] apfmon messages muted
[2025-10-13 08:31:48] 2025-10-13 06:31:48,153 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:31:48] 2025-10-13 06:31:48,155 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:31:48]  *** Error codes and diagnostics ***
[2025-10-13 08:31:48]     "exeErrorCode": 0,
[2025-10-13 08:31:48]     "exeErrorDiag": "",
[2025-10-13 08:31:48]     "pilotErrorCode": 0,
[2025-10-13 08:31:48]     "pilotErrorDiag": "",
[2025-10-13 08:31:48]  *** Listing of results directory ***
[2025-10-13 08:31:48] total 415716
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:10 queuedata.json
[2025-10-13 08:31:48] -rwx------ 1 boinc boinc     36292 Oct 12 16:11 runpilot2-wrapper.sh
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:31:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:26 run_atlas
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:26 job.xml
[2025-10-13 08:31:48] -rw-r--r-- 2 boinc boinc 222955656 Oct 13 06:26 EVNT.46676267._004215.pool.root.1
[2025-10-13 08:31:48] -rw-r--r-- 2 boinc boinc    569679 Oct 13 06:26 input.tar.gz
[2025-10-13 08:31:48] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:26 start_atlas.sh
[2025-10-13 08:31:48] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:26 shared
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:26 boinc_setup_complete
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc      6281 Oct 13 06:26 init_data.xml
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:26 boinc_lockfile
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:26 pandaJob.out
[2025-10-13 08:31:48] -rw------- 1 boinc boinc    974365 Oct 13 06:26 agis_schedconf.cvmfs.json
[2025-10-13 08:31:48] -rw------- 1 boinc boinc   1560580 Oct 13 06:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:31:48] drwx------ 5 boinc boinc      4096 Oct 13 06:26 pilot3
[2025-10-13 08:31:48] -rw------- 1 boinc boinc        95 Oct 13 08:30 pilot_heartbeat.json
[2025-10-13 08:31:48] -rw------- 1 boinc boinc 196152203 Oct 13 08:30 HITS.46676269._080321.pool.root.1
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc       529 Oct 13 08:30 boinc_task_state.xml
[2025-10-13 08:31:48] -rw------- 1 boinc boinc      1017 Oct 13 08:30 memory_monitor_summary.json
[2025-10-13 08:31:48] -rw------- 1 boinc boinc    272575 Oct 13 08:30 log.46676269._080321.job.log.tgz.1
[2025-10-13 08:31:48] -rw------- 1 boinc boinc      7756 Oct 13 08:31 heartbeat.json
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:31 boinc_mmap_file
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc        27 Oct 13 08:31 wrapper_checkpoint.txt
[2025-10-13 08:31:48] -rw------- 1 boinc boinc      4628 Oct 13 08:31 pilotlog.txt
[2025-10-13 08:31:48] -rw------- 1 boinc boinc   1076749 Oct 13 08:31 log.46676269._080321.job.log.1
[2025-10-13 08:31:48] -rw------- 1 boinc boinc       357 Oct 13 08:31 output.list
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:31 runtime_log
[2025-10-13 08:31:48] -rw------- 1 boinc boinc   1372160 Oct 13 08:31 result.tar.gz
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc      8777 Oct 13 08:31 runtime_log.err
[2025-10-13 08:31:48] -rw------- 1 boinc boinc       659 Oct 13 08:31 08bNDmgyBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFBkNDmaihYYn.diag
[2025-10-13 08:31:48] -rw-r--r-- 1 boinc boinc      6403 Oct 13 08:31 stderr.txt
[2025-10-13 08:31:48] HITS file was successfully produced:
[2025-10-13 08:31:48] -rw------- 1 boinc boinc 196152203 Oct 13 08:30 shared/HITS.pool.root.1
[2025-10-13 08:31:48]  *** Contents of shared directory: ***
[2025-10-13 08:31:48] total 411212
[2025-10-13 08:31:48] -rw-r--r-- 2 boinc boinc 222955656 Oct 13 06:26 ATLAS.root_0
[2025-10-13 08:31:48] -rw-r--r-- 2 boinc boinc    569679 Oct 13 06:26 input.tar.gz
[2025-10-13 08:31:48] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:26 start_atlas.sh
[2025-10-13 08:31:48] -rw------- 1 boinc boinc 196152203 Oct 13 08:30 HITS.pool.root.1
[2025-10-13 08:31:48] -rw------- 1 boinc boinc   1372160 Oct 13 08:31 result.tar.gz
08:31:50 (2740738): run_atlas exited; CPU time 14549.987528
08:31:50 (2740738): called boinc_finish(0)

</stderr_txt>
]]>

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