Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:56:31 (3943540): wrapper (7.7.26015): starting
11:56:31 (3943540): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 11:56:31] Arguments: --nthreads 6
[2025-10-13 11:56:31] Threads: 6
[2025-10-13 11:56:31] Checking for CVMFS
[2025-10-13 11:56:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:56:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:56:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:56:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:56:36] 2.12.7.0 249871 6739 95536 151645 0 188 13983929 20971521 929 130560 0 11498031 99.996 233930 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://134.75.124.122:3128 0
[2025-10-13 11:56:36] CVMFS is ok
[2025-10-13 11:56:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:56:36] Checking for apptainer binary...
[2025-10-13 11:56:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:56:36] Running /usr/bin/apptainer --version
[2025-10-13 11:56:36] apptainer version 1.4.0-1.el9
[2025-10-13 11:56:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:56:36] testio005
[2025-10-13 11:56:36] apptainer works
[2025-10-13 11:56:36] Set ATHENA_PROC_NUMBER=6
[2025-10-13 11:56:36] Set ATHENA_CORE_NUMBER=6
[2025-10-13 11:56:36] Starting ATLAS job with PandaID=6840224898
[2025-10-13 11:56:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:31:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:31:00] 2025-10-13 04:29:54,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:29:55,661 | INFO     | time since job start (5588s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:29:56,959 | INFO     | monitor loop #422: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:29:56,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:29:57,664 | INFO     | time since job start (5590s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:29:59,462 | INFO     | monitor loop #423: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:29:59,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:29:59,670 | INFO     | time since job start (5592s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:01,672 | INFO     | time since job start (5594s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:01,965 | INFO     | monitor loop #424: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:30:01,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:30:02,775 | INFO     | PID=3947329 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:31:00] 2025-10-13 04:30:02,775 | INFO     | .. there are 2 such processes running
[2025-10-13 13:31:00] 2025-10-13 04:30:03,776 | INFO     | time since job start (5596s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:04,468 | INFO     | monitor loop #425: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:30:04,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:30:05,777 | INFO     | time since job start (5598s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:06,971 | INFO     | monitor loop #426: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:30:06,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:30:07,782 | INFO     | time since job start (5600s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:09,474 | INFO     | monitor loop #427: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:30:09,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:30:09,787 | INFO     | time since job start (5602s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:11,792 | INFO     | time since job start (5604s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:11,977 | INFO     | monitor loop #428: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:30:11,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:30:13,798 | INFO     | time since job start (5606s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:14,481 | INFO     | monitor loop #429: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:30:14,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:30:15,803 | INFO     | time since job start (5608s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:16,982 | INFO     | monitor loop #430: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:30:16,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:30:17,809 | INFO     | time since job start (5610s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:19,485 | INFO     | monitor loop #431: job 0:6840224898 is in state 'finished'
[2025-10-13 13:31:00] 2025-10-13 04:30:19,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:31:00] 2025-10-13 04:30:19,814 | INFO     | time since job start (5612s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:21,820 | INFO     | time since job start (5614s) is within the limit (172800.0s)
[2025-10-13 13:31:00] 2025-10-13 04:30:21,925 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 13:31:00] 2025-10-13 04:30:21,928 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3332.5636875
[2025-10-13 13:31:00] 2025-10-13 04:30:21,931 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840224898/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:31:00] 2025-10-13 04:30:21,932 | INFO     | extracted standard info from prmon json
[2025-10-13 13:31:00] 2025-10-13 04:30:21,932 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:31:00] 2025-10-13 04:30:21,932 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:31:00] 2025-10-13 04:30:21,932 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:31:00] 2025-10-13 04:30:21,932 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:31:00] 2025-10-13 04:30:21,934 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:31:00] 2025-10-13 04:30:21,934 | INFO     | sum of square deviations: 183761585.0
[2025-10-13 13:31:00] 2025-10-13 04:30:21,935 | INFO     | sum of deviations: -3270314035.5
[2025-10-13 13:31:00] 2025-10-13 04:30:21,935 | INFO     | mean x: 1760327066.5
[2025-10-13 13:31:00] 2025-10-13 04:30:21,935 | INFO     | mean y: 2473670.869047619
[2025-10-13 13:31:00] 2025-10-13 04:30:21,935 | INFO     | -- intersect: 31330143774.74572
[2025-10-13 13:31:00] 2025-10-13 04:30:21,935 | INFO     | intersect: 31330143774.74572
[2025-10-13 13:31:00] 2025-10-13 04:30:21,935 | INFO     | chi2: 0.056121445388485625
[2025-10-13 13:31:00] 2025-10-13 04:30:21,936 | INFO     | -- intersect: 31330143774.74572
[2025-10-13 13:31:00] 2025-10-13 04:30:21,936 | INFO     | current memory leak: -17.80 B/s (using 84 data points, chi2=0.06)
[2025-10-13 13:31:00] 2025-10-13 04:30:21,936 | INFO     | could have reported an average CPU frequency of 3321 MHz (6 samples)
[2025-10-13 13:31:00] 2025-10-13 04:30:21,936 | INFO     | ..............................
[2025-10-13 13:31:00] 2025-10-13 04:30:21,936 | INFO     | . Timing measurements:
[2025-10-13 13:31:00] 2025-10-13 04:30:21,936 | INFO     | . get job = 0 s
[2025-10-13 13:31:00] 2025-10-13 04:30:21,936 | INFO     | . initial setup = 4 s
[2025-10-13 13:31:00] 2025-10-13 04:30:21,937 | INFO     | . payload setup = 4 s
[2025-10-13 13:31:00] 2025-10-13 04:30:21,937 | INFO     | . stage-in = 0 s
[2025-10-13 13:31:00] 2025-10-13 04:30:21,937 | INFO     | . payload execution = 5529 s
[2025-10-13 13:31:00] 2025-10-13 04:30:21,937 | INFO     | . stage-out = 0 s
[2025-10-13 13:31:00] 2025-10-13 04:30:21,937 | INFO     | . log creation = 0 s
[2025-10-13 13:31:00] 2025-10-13 04:30:21,937 | INFO     | ..............................
[2025-10-13 13:31:00] 2025-10-13 04:30:22,004 | INFO     | 
[2025-10-13 13:31:00] 2025-10-13 04:30:22,004 | INFO     | job summary report
[2025-10-13 13:31:00] 2025-10-13 04:30:22,004 | INFO     | --------------------------------------------------
[2025-10-13 13:31:00] 2025-10-13 04:30:22,004 | INFO     | PanDA job id: 6840224898
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | task id: 46676269
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | errors: (none)
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | pilot state: finished 
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | transexitcode: 0
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | exeerrorcode: 0
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | exeerrordiag: 
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | exitcode: 0
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | exitmsg: OK
[2025-10-13 13:31:00] 2025-10-13 04:30:22,005 | INFO     | cpuconsumptiontime: 30713 s
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | nevents: 400
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | neventsw: 0
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | pid: 3954101
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | pgrp: 3954101
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | corecount: 6
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | event service: False
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 5537: 2375775, 5538: 2384828, 5540: 2384828, 5601: 2385150}
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | --------------------------------------------------
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | 
[2025-10-13 13:31:00] 2025-10-13 04:30:22,006 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 13:31:00] 2025-10-13 04:30:22,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,023 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:31:00] 2025-10-13 04:30:22,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,023 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:31:00] 2025-10-13 04:30:22,023 | INFO     | job 6840224898 has completed (purged errors)
[2025-10-13 13:31:00] 2025-10-13 04:30:22,023 | INFO     | overall cleanup function is called
[2025-10-13 13:31:00] 2025-10-13 04:30:23,030 | INFO     | --- collectZombieJob: --- 10, [3954101]
[2025-10-13 13:31:00] 2025-10-13 04:30:23,030 | INFO     | zombie collector waiting for pid 3954101
[2025-10-13 13:31:00] 2025-10-13 04:30:23,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:31:00] 2025-10-13 04:30:23,031 | INFO     | collected zombie processes
[2025-10-13 13:31:00] 2025-10-13 04:30:23,031 | INFO     | will attempt to kill all subprocesses of pid=3954101
[2025-10-13 13:31:00] 2025-10-13 04:30:23,120 | INFO     | process IDs to be killed: [3954101] (in reverse order)
[2025-10-13 13:31:00] 2025-10-13 04:30:23,160 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:31:00] 2025-10-13 04:30:23,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:31:00] 2025-10-13 04:30:23,164 | INFO     | did not find any defunct processes belonging to 3954101
[2025-10-13 13:31:00] 2025-10-13 04:30:23,168 | INFO     | did not find any defunct processes belonging to 3954101
[2025-10-13 13:31:00] 2025-10-13 04:30:23,168 | INFO     | ready for new job
[2025-10-13 13:31:00] 2025-10-13 04:30:23,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:31:00] 2025-10-13 04:30:23,169 | INFO     | ***************************************
[2025-10-13 13:31:00] 2025-10-13 04:30:23,170 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:31:00] 2025-10-13 04:30:23,170 | INFO     | ***************************************
[2025-10-13 13:31:00] 2025-10-13 04:30:23,170 | INFO     | 
[2025-10-13 13:31:00] 2025-10-13 04:30:23,171 | INFO     | architecture information:
[2025-10-13 13:31:00] 2025-10-13 04:30:23,171 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:31:00] 2025-10-13 04:30:23,182 | INFO     | cat /etc/os-release:
[2025-10-13 13:31:00] NAME="CentOS Linux"
[2025-10-13 13:31:00] VERSION="7 (Core)"
[2025-10-13 13:31:00] ID="centos"
[2025-10-13 13:31:00] ID_LIKE="rhel fedora"
[2025-10-13 13:31:00] VERSION_ID="7"
[2025-10-13 13:31:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:31:00] ANSI_COLOR="0;31"
[2025-10-13 13:31:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:31:00] HOME_URL="https://www.centos.org/"
[2025-10-13 13:31:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:31:00] 
[2025-10-13 13:31:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:31:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:31:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:31:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:31:00] 
[2025-10-13 13:31:00] 2025-10-13 04:30:23,182 | INFO     | ***************************************
[2025-10-13 13:31:00] 2025-10-13 04:30:23,685 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 13:31:00] 2025-10-13 04:30:23,697 | INFO     | sufficient remaining disk space (96646201344 B)
[2025-10-13 13:31:00] 2025-10-13 04:30:23,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:31:00] 2025-10-13 04:30:23,697 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:31:00] 2025-10-13 04:30:23,697 | INFO     | update_server=False
[2025-10-13 13:31:00] 2025-10-13 04:30:23,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:31:00] 2025-10-13 04:30:23,698 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 13:31:00] 2025-10-13 04:30:23,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:31:00] 2025-10-13 04:30:23,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:31:00] 2025-10-13 04:30:23,698 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:31:00] 2025-10-13 04:30:23,698 | INFO     | aborting loop
[2025-10-13 13:31:00] 2025-10-13 04:30:23,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:31:00] 2025-10-13 04:30:23,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:31:00] 2025-10-13 04:30:23,720 | INFO     | all payload control threads have been joined
[2025-10-13 13:31:00] 2025-10-13 04:30:23,953 | INFO     | all data control threads have been joined
[2025-10-13 13:31:00] 2025-10-13 04:30:24,656 | INFO     | all job control threads have been joined
[2025-10-13 13:31:00] 2025-10-13 04:30:24,703 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:24,703 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:24,703 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:24,704 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:24,726 | INFO     | [payload] control thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:24,774 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:24,856 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:24,958 | INFO     | [data] control thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:24,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:31:00] 2025-10-13 04:30:25,392 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:25,565 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:25,661 | INFO     | [job] control thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:25,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:31:00] 2025-10-13 04:30:25,896 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:26,034 | INFO     | [job] validate thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:26,074 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:26,985 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:29,805 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:31:00] 2025-10-13 04:30:54,873 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:31:00] 2025-10-13 04:30:55,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086787725120)>', '<ExcThread(monitor, started 140085928392448)>']
[2025-10-13 13:31:00] 2025-10-13 04:30:55,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:31:00] 2025-10-13 04:30:55,852 | INFO     | [monitor] control thread has ended
[2025-10-13 13:31:00] 2025-10-13 04:31:00,802 | INFO     | all workflow threads have been joined
[2025-10-13 13:31:00] 2025-10-13 04:31:00,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:31:00] 2025-10-13 04:31:00,803 | INFO     | traces error code: 0
[2025-10-13 13:31:00] 2025-10-13 04:31:00,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:31:00] 2025-10-13 04:31:00,873 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:31:00] 2025-10-13 04:31:00,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:31:00] 2025-10-13 04:31:00,877 [wrapper] pilotpid: 3947329
[2025-10-13 13:31:00] 2025-10-13 04:31:00,879 [wrapper] Pilot exit status: 0
[2025-10-13 13:31:00] 2025-10-13 04:31:00,886 [wrapper] pandaids: 6840224898
[2025-10-13 13:31:00] 2025-10-13 04:31:00,909 [wrapper] cleanup supervisor_pilot 3991130 3947330
[2025-10-13 13:31:00] 2025-10-13 04:31:00,911 [wrapper] Test setup, not cleaning
[2025-10-13 13:31:00] 2025-10-13 04:31:00,914 [wrapper] apfmon messages muted
[2025-10-13 13:31:00] 2025-10-13 04:31:00,916 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:31:00] 2025-10-13 04:31:00,918 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:31:00]  *** Error codes and diagnostics ***
[2025-10-13 13:31:00]     "exeErrorCode": 0,
[2025-10-13 13:31:00]     "exeErrorDiag": "",
[2025-10-13 13:31:00]     "pilotErrorCode": 0,
[2025-10-13 13:31:00]     "pilotErrorDiag": "",
[2025-10-13 13:31:00]  *** Listing of results directory ***
[2025-10-13 13:31:00] total 412164
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc    557409 Oct 13 00:00 pilot3.tar.gz
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc      5112 Oct 13 00:26 queuedata.json
[2025-10-13 13:31:00] -rwx------. 1 boinc boinc     36292 Oct 13 00:28 runpilot2-wrapper.sh
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc       100 Oct 13 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:31:00] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 11:56 run_atlas
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc       105 Oct 13 11:56 job.xml
[2025-10-13 13:31:00] -rw-r--r--. 2 boinc boinc     15120 Oct 13 11:56 start_atlas.sh
[2025-10-13 13:31:00] drwxrwx--x. 2 boinc boinc        68 Oct 13 11:56 shared
[2025-10-13 13:31:00] -rw-r--r--. 2 boinc boinc    569681 Oct 13 11:56 input.tar.gz
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc      9362 Oct 13 11:56 init_data.xml
[2025-10-13 13:31:00] -rw-r--r--. 2 boinc boinc 219574391 Oct 13 11:56 EVNT.46676267._004570.pool.root.1
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc         0 Oct 13 11:56 boinc_lockfile
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc      2550 Oct 13 11:56 pandaJob.out
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc    974373 Oct 13 11:56 agis_schedconf.cvmfs.json
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc   1560580 Oct 13 11:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:31:00] drwx------. 5 boinc boinc      4096 Oct 13 11:56 pilot3
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc 196356863 Oct 13 13:28 HITS.46676269._082193.pool.root.1
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc      1018 Oct 13 13:29 memory_monitor_summary.json
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc    297326 Oct 13 13:29 log.46676269._082193.job.log.tgz.1
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc       529 Oct 13 13:29 boinc_task_state.xml
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc        95 Oct 13 13:29 pilot_heartbeat.json
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc      7751 Oct 13 13:30 heartbeat.json
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc      8192 Oct 13 13:30 boinc_mmap_file
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc        27 Oct 13 13:30 wrapper_checkpoint.txt
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc      4552 Oct 13 13:31 pilotlog.txt
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc    816198 Oct 13 13:31 log.46676269._082193.job.log.1
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc       357 Oct 13 13:31 output.list
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc       620 Oct 13 13:31 runtime_log
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc   1136640 Oct 13 13:31 result.tar.gz
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc      8661 Oct 13 13:31 runtime_log.err
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc       642 Oct 13 13:31 IcRLDmGBDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6HUMDmBcZorn.diag
[2025-10-13 13:31:00] -rw-r--r--. 1 boinc boinc     21919 Oct 13 13:31 stderr.txt
[2025-10-13 13:31:00] HITS file was successfully produced:
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc 196356863 Oct 13 13:28 shared/HITS.pool.root.1
[2025-10-13 13:31:00]  *** Contents of shared directory: ***
[2025-10-13 13:31:00] total 407876
[2025-10-13 13:31:00] -rw-r--r--. 2 boinc boinc     15120 Oct 13 11:56 start_atlas.sh
[2025-10-13 13:31:00] -rw-r--r--. 2 boinc boinc    569681 Oct 13 11:56 input.tar.gz
[2025-10-13 13:31:00] -rw-r--r--. 2 boinc boinc 219574391 Oct 13 11:56 ATLAS.root_0
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc 196356863 Oct 13 13:28 HITS.pool.root.1
[2025-10-13 13:31:00] -rw-------. 1 boinc boinc   1136640 Oct 13 13:31 result.tar.gz
13:31:02 (3943540): run_atlas exited; CPU time 30772.356203
13:31:02 (3943540): called boinc_finish(0)

</stderr_txt>
]]>

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