Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:50:38 (16111): wrapper (7.7.26015): starting
14:50:38 (16111): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:50:38] Arguments: --nthreads 8
[2025-10-12 14:50:38] Threads: 8
[2025-10-12 14:50:38] Checking for CVMFS
[2025-10-12 14:50:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:50:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:50:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:50:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:50:38] 2.11.2.0 8539 53297 131180 151633 3 57 11606062 18432001 1315 130560 0 50345503 99.975 2280455 37408 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:50:38] CVMFS is ok
[2025-10-12 14:50:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:50:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:50:38] Further information can be found at the LHC@home message board.
[2025-10-12 14:50:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:50:38] Checking for apptainer binary...
[2025-10-12 14:50:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:50:38] Running /usr/bin/apptainer --version
[2025-10-12 14:50:38] apptainer version 1.3.2-1.el7
[2025-10-12 14:50:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:50:39] c-206-1.aglt2.org
[2025-10-12 14:50:39] apptainer works
[2025-10-12 14:50:39] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:50:39] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:50:39] Starting ATLAS job with PandaID=6840429698
[2025-10-12 14:50:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:41:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:41:11] 2025-10-12 21:40:10,601 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:41:11] 2025-10-12 21:40:10,602 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,602 | INFO     | sum of deviations: 239407615.0000038
[2025-10-12 17:41:11] 2025-10-12 21:40:10,602 | INFO     | mean x: 1760300135.0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,603 | INFO     | mean y: 2492731.7005988024
[2025-10-12 17:41:11] 2025-10-12 21:40:10,603 | INFO     | -- intersect: -289325497.3784726
[2025-10-12 17:41:11] 2025-10-12 21:40:10,603 | INFO     | intersect: -289325497.3784726
[2025-10-12 17:41:11] 2025-10-12 21:40:10,603 | INFO     | chi2: 2.0828534273815316
[2025-10-12 17:41:11] 2025-10-12 21:40:10,603 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 17:41:11] 2025-10-12 21:40:10,604 | INFO     | sum of deviations: 11512699366.5
[2025-10-12 17:41:11] 2025-10-12 21:40:10,604 | INFO     | mean x: 1760299982.5
[2025-10-12 17:41:11] 2025-10-12 21:40:10,604 | INFO     | mean y: 2506056.1666666665
[2025-10-12 17:41:11] 2025-10-12 21:40:10,604 | INFO     | -- intersect: -15370433856.852907
[2025-10-12 17:41:11] 2025-10-12 21:40:10,604 | INFO     | intersect: -15370433856.852907
[2025-10-12 17:41:11] 2025-10-12 21:40:10,605 | INFO     | chi2: 1.2684835018181027
[2025-10-12 17:41:11] 2025-10-12 21:40:10,605 | INFO     | current chi2=1.2684835018181027 (change=39.098763017002966 %)
[2025-10-12 17:41:11] 2025-10-12 21:40:10,605 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,606 | INFO     | sum of deviations: 11227528849.999998
[2025-10-12 17:41:11] 2025-10-12 21:40:10,606 | INFO     | mean x: 1760299830.0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,606 | INFO     | mean y: 2505688.566878981
[2025-10-12 17:41:11] 2025-10-12 21:40:10,606 | INFO     | -- intersect: -16468156692.62926
[2025-10-12 17:41:11] 2025-10-12 21:40:10,606 | INFO     | intersect: -16468156692.62926
[2025-10-12 17:41:11] 2025-10-12 21:40:10,606 | INFO     | chi2: 1.2695675053773257
[2025-10-12 17:41:11] 2025-10-12 21:40:10,607 | INFO     | current chi2=1.2695675053773257 (change=-0.08545665415981459 %)
[2025-10-12 17:41:11] 2025-10-12 21:40:10,607 | INFO     | right removable region: 156
[2025-10-12 17:41:11] 2025-10-12 21:40:10,607 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 17:41:11] 2025-10-12 21:40:10,608 | INFO     | sum of deviations: -21750718760.0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,608 | INFO     | mean x: 1760300287.5
[2025-10-12 17:41:11] 2025-10-12 21:40:10,608 | INFO     | mean y: 2519006.987654321
[2025-10-12 17:41:11] 2025-10-12 21:40:10,608 | INFO     | -- intersect: 29046320104.651447
[2025-10-12 17:41:11] 2025-10-12 21:40:10,608 | INFO     | intersect: 29046320104.651447
[2025-10-12 17:41:11] 2025-10-12 21:40:10,608 | INFO     | chi2: 0.8836791856218293
[2025-10-12 17:41:11] 2025-10-12 21:40:10,608 | INFO     | current chi2=0.8836791856218293 (change=57.57362596883495 %)
[2025-10-12 17:41:11] 2025-10-12 21:40:10,609 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,609 | INFO     | sum of deviations: -21756902147.0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,609 | INFO     | mean x: 1760300440.0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,610 | INFO     | mean y: 2518962.7324840766
[2025-10-12 17:41:11] 2025-10-12 21:40:10,610 | INFO     | -- intersect: 31919668202.91102
[2025-10-12 17:41:11] 2025-10-12 21:40:10,610 | INFO     | intersect: 31919668202.91102
[2025-10-12 17:41:11] 2025-10-12 21:40:10,610 | INFO     | chi2: 0.8711393492017772
[2025-10-12 17:41:11] 2025-10-12 21:40:10,610 | INFO     | current chi2=0.8711393492017772 (change=1.419048521690383 %)
[2025-10-12 17:41:11] 2025-10-12 21:40:10,610 | INFO     | left removable region: 20
[2025-10-12 17:41:11] 2025-10-12 21:40:10,611 | INFO     | sum of square deviations: 779958810.0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,611 | INFO     | sum of deviations: -6505492101.5
[2025-10-12 17:41:11] 2025-10-12 21:40:10,611 | INFO     | mean x: 1760300409.5
[2025-10-12 17:41:11] 2025-10-12 21:40:10,611 | INFO     | mean y: 2528818.595588235
[2025-10-12 17:41:11] 2025-10-12 21:40:10,611 | INFO     | -- intersect: 14684868787.637627
[2025-10-12 17:41:11] 2025-10-12 21:40:10,611 | INFO     | intersect: 14684868787.637627
[2025-10-12 17:41:11] 2025-10-12 21:40:10,612 | INFO     | chi2: 0.02868351914225756
[2025-10-12 17:41:11] 2025-10-12 21:40:10,612 | INFO     | -- intersect: 14684868787.637627
[2025-10-12 17:41:11] 2025-10-12 21:40:10,612 | INFO     | current memory leak: -8.34 B/s (using 136 data points, chi2=0.03)
[2025-10-12 17:41:11] 2025-10-12 21:40:10,612 | INFO     | could have reported an average CPU frequency of 2407 MHz (9 samples)
[2025-10-12 17:41:11] 2025-10-12 21:40:10,612 | INFO     | ..............................
[2025-10-12 17:41:11] 2025-10-12 21:40:10,613 | INFO     | . Timing measurements:
[2025-10-12 17:41:11] 2025-10-12 21:40:10,613 | INFO     | . get job = 0 s
[2025-10-12 17:41:11] 2025-10-12 21:40:10,613 | INFO     | . initial setup = 2 s
[2025-10-12 17:41:11] 2025-10-12 21:40:10,613 | INFO     | . payload setup = 4 s
[2025-10-12 17:41:11] 2025-10-12 21:40:10,613 | INFO     | . stage-in = 0 s
[2025-10-12 17:41:11] 2025-10-12 21:40:10,613 | INFO     | . payload execution = 10133 s
[2025-10-12 17:41:11] 2025-10-12 21:40:10,613 | INFO     | . stage-out = 1 s
[2025-10-12 17:41:11] 2025-10-12 21:40:10,613 | INFO     | . log creation = 0 s
[2025-10-12 17:41:11] 2025-10-12 21:40:10,613 | INFO     | ..............................
[2025-10-12 17:41:11] 2025-10-12 21:40:10,928 | INFO     | 
[2025-10-12 17:41:11] 2025-10-12 21:40:10,928 | INFO     | job summary report
[2025-10-12 17:41:11] 2025-10-12 21:40:10,928 | INFO     | --------------------------------------------------
[2025-10-12 17:41:11] 2025-10-12 21:40:10,929 | INFO     | PanDA job id: 6840429698
[2025-10-12 17:41:11] 2025-10-12 21:40:10,929 | INFO     | task id: 46676269
[2025-10-12 17:41:11] 2025-10-12 21:40:10,929 | INFO     | errors: (none)
[2025-10-12 17:41:11] 2025-10-12 21:40:10,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:41:11] 2025-10-12 21:40:10,929 | INFO     | pilot state: finished 
[2025-10-12 17:41:11] 2025-10-12 21:40:10,929 | INFO     | transexitcode: 0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,930 | INFO     | exeerrorcode: 0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,930 | INFO     | exeerrordiag: 
[2025-10-12 17:41:11] 2025-10-12 21:40:10,930 | INFO     | exitcode: 0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,930 | INFO     | exitmsg: OK
[2025-10-12 17:41:11] 2025-10-12 21:40:10,930 | INFO     | cpuconsumptiontime: 76441 s
[2025-10-12 17:41:11] 2025-10-12 21:40:10,931 | INFO     | nevents: 400
[2025-10-12 17:41:11] 2025-10-12 21:40:10,931 | INFO     | neventsw: 0
[2025-10-12 17:41:11] 2025-10-12 21:40:10,931 | INFO     | pid: 28292
[2025-10-12 17:41:11] 2025-10-12 21:40:10,931 | INFO     | pgrp: 28292
[2025-10-12 17:41:11] 2025-10-12 21:40:10,931 | INFO     | corecount: 8
[2025-10-12 17:41:11] 2025-10-12 21:40:10,931 | INFO     | event service: False
[2025-10-12 17:41:11] 2025-10-12 21:40:10,932 | INFO     | sizes: {0: 2348630, 1: 2348885, 4: 2349147, 12: 2349175, 10141: 2377892, 10143: 2387074, 10147: 2387276}
[2025-10-12 17:41:11] 2025-10-12 21:40:10,932 | INFO     | --------------------------------------------------
[2025-10-12 17:41:11] 2025-10-12 21:40:10,932 | INFO     | 
[2025-10-12 17:41:11] 2025-10-12 21:40:10,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 17:41:11] 2025-10-12 21:40:10,959 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,959 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,962 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:41:11] 2025-10-12 21:40:10,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,962 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:41:11] 2025-10-12 21:40:10,962 | INFO     | job 6840429698 has completed (purged errors)
[2025-10-12 17:41:11] 2025-10-12 21:40:10,962 | INFO     | overall cleanup function is called
[2025-10-12 17:41:11] 2025-10-12 21:40:11,969 | INFO     | --- collectZombieJob: --- 10, [28292]
[2025-10-12 17:41:11] 2025-10-12 21:40:11,970 | INFO     | zombie collector waiting for pid 28292
[2025-10-12 17:41:11] 2025-10-12 21:40:11,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:41:11] 2025-10-12 21:40:11,970 | INFO     | collected zombie processes
[2025-10-12 17:41:11] 2025-10-12 21:40:11,970 | INFO     | will attempt to kill all subprocesses of pid=28292
[2025-10-12 17:41:11] 2025-10-12 21:40:12,106 | INFO     | process IDs to be killed: [28292] (in reverse order)
[2025-10-12 17:41:11] 2025-10-12 21:40:12,160 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:41:11] 2025-10-12 21:40:12,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:41:11] 2025-10-12 21:40:12,163 | INFO     | did not find any defunct processes belonging to 28292
[2025-10-12 17:41:11] 2025-10-12 21:40:12,165 | INFO     | did not find any defunct processes belonging to 28292
[2025-10-12 17:41:11] 2025-10-12 21:40:12,166 | INFO     | ready for new job
[2025-10-12 17:41:11] 2025-10-12 21:40:12,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:41:11] 2025-10-12 21:40:12,167 | INFO     | ***************************************
[2025-10-12 17:41:11] 2025-10-12 21:40:12,167 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:41:11] 2025-10-12 21:40:12,167 | INFO     | ***************************************
[2025-10-12 17:41:11] 2025-10-12 21:40:12,167 | INFO     | 
[2025-10-12 17:41:11] 2025-10-12 21:40:12,168 | INFO     | architecture information:
[2025-10-12 17:41:11] 2025-10-12 21:40:12,169 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:41:11] 2025-10-12 21:40:12,180 | INFO     | cat /etc/os-release:
[2025-10-12 17:41:11] NAME="CentOS Linux"
[2025-10-12 17:41:11] VERSION="7 (Core)"
[2025-10-12 17:41:11] ID="centos"
[2025-10-12 17:41:11] ID_LIKE="rhel fedora"
[2025-10-12 17:41:11] VERSION_ID="7"
[2025-10-12 17:41:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:41:11] ANSI_COLOR="0;31"
[2025-10-12 17:41:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:41:11] HOME_URL="https://www.centos.org/"
[2025-10-12 17:41:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:41:11] 
[2025-10-12 17:41:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:41:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:41:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:41:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:41:11] 
[2025-10-12 17:41:11] 2025-10-12 21:40:12,180 | INFO     | ***************************************
[2025-10-12 17:41:11] 2025-10-12 21:40:12,683 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 17:41:11] 2025-10-12 21:40:12,704 | INFO     | sufficient remaining disk space (28404875264 B)
[2025-10-12 17:41:11] 2025-10-12 21:40:12,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:41:11] 2025-10-12 21:40:12,705 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:41:11] 2025-10-12 21:40:12,705 | INFO     | update_server=False
[2025-10-12 17:41:11] 2025-10-12 21:40:12,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:41:11] 2025-10-12 21:40:12,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:41:11] 2025-10-12 21:40:12,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:41:11] 2025-10-12 21:40:12,855 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:41:11] 2025-10-12 21:40:12,856 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:41:11] 2025-10-12 21:40:12,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:41:11] 2025-10-12 21:40:12,856 | INFO     | will abort loop
[2025-10-12 17:41:11] 2025-10-12 21:40:13,172 | INFO     | all data control threads have been joined
[2025-10-12 17:41:11] 2025-10-12 21:40:13,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:41:11] 2025-10-12 21:40:13,467 | INFO     | all payload control threads have been joined
[2025-10-12 17:41:11] 2025-10-12 21:40:13,711 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:13,711 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:13,712 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:13,851 | INFO     | all job control threads have been joined
[2025-10-12 17:41:11] 2025-10-12 21:40:13,862 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:14,177 | INFO     | [data] control thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:14,186 | INFO     | [job] validate thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:14,341 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:14,439 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:14,441 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:14,441 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:14,472 | INFO     | [payload] control thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:14,710 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:14,856 | INFO     | [job] control thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:15,226 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:17,231 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:22,992 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:41:11] 2025-10-12 21:40:23,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:41:11] 2025-10-12 21:40:42,574 | INFO     | PID=19809 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:41:11] 2025-10-12 21:40:42,574 | INFO     | .. there are 3 such processes running
[2025-10-12 17:41:11] 2025-10-12 21:40:42,575 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:41:11] 2025-10-12 21:40:42,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:41:11] 2025-10-12 21:40:42,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:41:11] 2025-10-12 21:41:05,388 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:41:11] 2025-10-12 21:41:06,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568062256960)>', '<ExcThread(monitor, started 140567459636992)>']
[2025-10-12 17:41:11] 2025-10-12 21:41:06,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:41:11] 2025-10-12 21:41:06,701 | INFO     | [monitor] control thread has ended
[2025-10-12 17:41:11] 2025-10-12 21:41:11,244 | INFO     | all workflow threads have been joined
[2025-10-12 17:41:11] 2025-10-12 21:41:11,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:41:11] 2025-10-12 21:41:11,245 | INFO     | traces error code: 0
[2025-10-12 17:41:11] 2025-10-12 21:41:11,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:41:11] 2025-10-12 21:41:11,366 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:41:11] 2025-10-12 21:41:11,368 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:41:11] 2025-10-12 21:41:11,371 [wrapper] pilotpid: 19809
[2025-10-12 17:41:11] 2025-10-12 21:41:11,373 [wrapper] Pilot exit status: 0
[2025-10-12 17:41:11] 2025-10-12 21:41:11,397 [wrapper] pandaids: 6840429698
[2025-10-12 17:41:11] 2025-10-12 21:41:11,434 [wrapper] cleanup supervisor_pilot 14338 19810
[2025-10-12 17:41:11] 2025-10-12 21:41:11,436 [wrapper] Test setup, not cleaning
[2025-10-12 17:41:11] 2025-10-12 21:41:11,443 [wrapper] apfmon messages muted
[2025-10-12 17:41:11] 2025-10-12 21:41:11,446 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:41:11] 2025-10-12 21:41:11,448 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:41:11]  *** Error codes and diagnostics ***
[2025-10-12 17:41:11]     "exeErrorCode": 0,
[2025-10-12 17:41:11]     "exeErrorDiag": "",
[2025-10-12 17:41:11]     "pilotErrorCode": 0,
[2025-10-12 17:41:11]     "pilotErrorDiag": "",
[2025-10-12 17:41:11]  *** Listing of results directory ***
[2025-10-12 17:41:11] total 412024
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-12 17:41:11] -rwx------ 1 boincer umatlas     36292 Oct 12 13:27 runpilot2-wrapper.sh
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:27 queuedata.json
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:41:11] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:50 run_atlas
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:50 job.xml
[2025-10-12 17:41:11] -rw-r--r-- 2 boincer umatlas 222805151 Oct 12 14:50 EVNT.46676267._004817.pool.root.1
[2025-10-12 17:41:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:50 start_atlas.sh
[2025-10-12 17:41:11] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:50 shared
[2025-10-12 17:41:11] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 14:50 input.tar.gz
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:50 boinc_lockfile
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 14:50 pandaJob.out
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas    975528 Oct 12 14:50 agis_schedconf.cvmfs.json
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas   1560580 Oct 12 14:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:41:11] drwx------ 5 boincer umatlas      4096 Oct 12 14:50 pilot3
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas      5950 Oct 12 17:37 init_data.xml
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas 191517179 Oct 12 17:39 HITS.46676269._084811.pool.root.1
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas       531 Oct 12 17:39 boinc_task_state.xml
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas      1053 Oct 12 17:40 memory_monitor_summary.json
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas    410306 Oct 12 17:40 log.46676269._084811.job.log.tgz.1
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas      7856 Oct 12 17:40 heartbeat.json
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas        95 Oct 12 17:40 pilot_heartbeat.json
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas        28 Oct 12 17:40 wrapper_checkpoint.txt
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:40 boinc_mmap_file
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas      5079 Oct 12 17:41 pilotlog.txt
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas   1433197 Oct 12 17:41 log.46676269._084811.job.log.1
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas       357 Oct 12 17:41 output.list
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:41 runtime_log
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas   1863680 Oct 12 17:41 result.tar.gz
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas       661 Oct 12 17:41 yXXLDmJ2ES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCWUMDmQL7Sbn.diag
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 17:41 runtime_log.err
[2025-10-12 17:41:11] -rw-r--r-- 1 boincer umatlas     20875 Oct 12 17:41 stderr.txt
[2025-10-12 17:41:11] HITS file was successfully produced:
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas 191517179 Oct 12 17:39 shared/HITS.pool.root.1
[2025-10-12 17:41:11]  *** Contents of shared directory: ***
[2025-10-12 17:41:11] total 407016
[2025-10-12 17:41:11] -rw-r--r-- 2 boincer umatlas 222805151 Oct 12 14:50 ATLAS.root_0
[2025-10-12 17:41:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:50 start_atlas.sh
[2025-10-12 17:41:11] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 14:50 input.tar.gz
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas 191517179 Oct 12 17:39 HITS.pool.root.1
[2025-10-12 17:41:11] -rw------- 1 boincer umatlas   1863680 Oct 12 17:41 result.tar.gz
17:41:12 (16111): run_atlas exited; CPU time 76632.795962
17:41:12 (16111): called boinc_finish(0)

</stderr_txt>
]]>

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