Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:47:28 (895): wrapper (7.7.26015): starting
14:47:28 (895): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:47:28] Arguments: --nthreads 8
[2025-10-12 14:47:28] Threads: 8
[2025-10-12 14:47:28] Checking for CVMFS
[2025-10-12 14:47:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:47:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:47:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:47:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:47:28] 2.11.2.0 24877 53262 127296 151633 2 57 14381824 18432000 1833 130560 0 49107028 99.976 2278850 37650 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:47:28] CVMFS is ok
[2025-10-12 14:47:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:47:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:47:28] Further information can be found at the LHC@home message board.
[2025-10-12 14:47:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:47:28] Checking for apptainer binary...
[2025-10-12 14:47:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:47:28] Running /usr/bin/apptainer --version
[2025-10-12 14:47:28] apptainer version 1.3.2-1.el7
[2025-10-12 14:47:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:47:29] c-206-3.aglt2.org
[2025-10-12 14:47:29] apptainer works
[2025-10-12 14:47:29] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:47:29] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:47:29] Starting ATLAS job with PandaID=6840429734
[2025-10-12 14:47:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:49:19]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:49:19] 2025-10-12 21:48:44,818 | INFO     | monitor loop #786: job 0:6840429734 is in state 'finished'
[2025-10-12 17:49:19] 2025-10-12 21:48:44,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:49:19] 2025-10-12 21:48:45,774 | INFO     | time since job start (10865s) is within the limit (172800.0s)
[2025-10-12 17:49:19] 2025-10-12 21:48:45,863 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:49:19] 2025-10-12 21:48:45,870 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2472.375
[2025-10-12 17:49:19] 2025-10-12 21:48:45,874 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840429734/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:49:19] 2025-10-12 21:48:45,875 | INFO     | extracted standard info from prmon json
[2025-10-12 17:49:19] 2025-10-12 21:48:45,876 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:49:19] 2025-10-12 21:48:45,876 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:49:19] 2025-10-12 21:48:45,876 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:49:19] 2025-10-12 21:48:45,876 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:49:19] 2025-10-12 21:48:45,882 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:49:19] 2025-10-12 21:48:45,882 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 17:49:19] 2025-10-12 21:48:45,884 | INFO     | sum of deviations: -6824758140.999998
[2025-10-12 17:49:19] 2025-10-12 21:48:45,884 | INFO     | mean x: 1760300282.5
[2025-10-12 17:49:19] 2025-10-12 21:48:45,884 | INFO     | mean y: 2517928.2471910114
[2025-10-12 17:49:19] 2025-10-12 21:48:45,885 | INFO     | -- intersect: 6872400288.938294
[2025-10-12 17:49:19] 2025-10-12 21:48:45,885 | INFO     | intersect: 6872400288.938294
[2025-10-12 17:49:19] 2025-10-12 21:48:45,885 | INFO     | chi2: 1.5578958066232502
[2025-10-12 17:49:19] 2025-10-12 21:48:45,886 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 17:49:19] 2025-10-12 21:48:45,887 | INFO     | sum of deviations: -6350066389.000001
[2025-10-12 17:49:19] 2025-10-12 21:48:45,887 | INFO     | mean x: 1760300130.0
[2025-10-12 17:49:19] 2025-10-12 21:48:45,887 | INFO     | mean y: 2518433.5606936417
[2025-10-12 17:49:19] 2025-10-12 21:48:45,888 | INFO     | -- intersect: 6964979258.050923
[2025-10-12 17:49:19] 2025-10-12 21:48:45,888 | INFO     | intersect: 6964979258.050923
[2025-10-12 17:49:19] 2025-10-12 21:48:45,888 | INFO     | chi2: 1.5576766832166222
[2025-10-12 17:49:19] 2025-10-12 21:48:45,888 | INFO     | current chi2=1.5576766832166222 (change=0.014065344145379547 %)
[2025-10-12 17:49:19] 2025-10-12 21:48:45,889 | INFO     | right removable region: 172
[2025-10-12 17:49:19] 2025-10-12 21:48:45,889 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 17:49:19] 2025-10-12 21:48:45,891 | INFO     | sum of deviations: -32362459807.999996
[2025-10-12 17:49:19] 2025-10-12 21:48:45,891 | INFO     | mean x: 1760300435.0
[2025-10-12 17:49:19] 2025-10-12 21:48:45,891 | INFO     | mean y: 2544751.4971098267
[2025-10-12 17:49:19] 2025-10-12 21:48:45,891 | INFO     | -- intersect: 35486015920.9231
[2025-10-12 17:49:19] 2025-10-12 21:48:45,891 | INFO     | intersect: 35486015920.9231
[2025-10-12 17:49:19] 2025-10-12 21:48:45,892 | INFO     | chi2: 0.1791099235100704
[2025-10-12 17:49:19] 2025-10-12 21:48:45,892 | INFO     | current chi2=0.1791099235100704 (change=88.5030871288952 %)
[2025-10-12 17:49:19] 2025-10-12 21:48:45,892 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 17:49:19] 2025-10-12 21:48:45,894 | INFO     | sum of deviations: -31443725540.499996
[2025-10-12 17:49:19] 2025-10-12 21:48:45,894 | INFO     | mean x: 1760300587.5
[2025-10-12 17:49:19] 2025-10-12 21:48:45,894 | INFO     | mean y: 2543653.970238095
[2025-10-12 17:49:19] 2025-10-12 21:48:45,894 | INFO     | -- intersect: 37649506836.88381
[2025-10-12 17:49:19] 2025-10-12 21:48:45,895 | INFO     | intersect: 37649506836.88381
[2025-10-12 17:49:19] 2025-10-12 21:48:45,895 | INFO     | chi2: 0.1609359275736729
[2025-10-12 17:49:19] 2025-10-12 21:48:45,895 | INFO     | current chi2=0.1609359275736729 (change=10.146839203678006 %)
[2025-10-12 17:49:19] 2025-10-12 21:48:45,895 | INFO     | left removable region: 20
[2025-10-12 17:49:19] 2025-10-12 21:48:45,896 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 17:49:19] 2025-10-12 21:48:45,897 | INFO     | sum of deviations: -20717397364.999996
[2025-10-12 17:49:19] 2025-10-12 21:48:45,897 | INFO     | mean x: 1760300709.5
[2025-10-12 17:49:19] 2025-10-12 21:48:45,897 | INFO     | mean y: 2532709.1578947366
[2025-10-12 17:49:19] 2025-10-12 21:48:45,898 | INFO     | -- intersect: 33493806838.959248
[2025-10-12 17:49:19] 2025-10-12 21:48:45,898 | INFO     | intersect: 33493806838.959248
[2025-10-12 17:49:19] 2025-10-12 21:48:45,898 | INFO     | chi2: 0.14384594066041614
[2025-10-12 17:49:19] 2025-10-12 21:48:45,898 | INFO     | -- intersect: 33493806838.959248
[2025-10-12 17:49:19] 2025-10-12 21:48:45,899 | INFO     | current memory leak: -19.03 B/s (using 152 data points, chi2=0.14)
[2025-10-12 17:49:19] 2025-10-12 21:48:45,899 | INFO     | could have reported an average CPU frequency of 2565 MHz (9 samples)
[2025-10-12 17:49:19] 2025-10-12 21:48:45,899 | INFO     | ..............................
[2025-10-12 17:49:19] 2025-10-12 21:48:45,900 | INFO     | . Timing measurements:
[2025-10-12 17:49:19] 2025-10-12 21:48:45,900 | INFO     | . get job = 0 s
[2025-10-12 17:49:19] 2025-10-12 21:48:45,900 | INFO     | . initial setup = 2 s
[2025-10-12 17:49:19] 2025-10-12 21:48:45,900 | INFO     | . payload setup = 4 s
[2025-10-12 17:49:19] 2025-10-12 21:48:45,900 | INFO     | . stage-in = 0 s
[2025-10-12 17:49:19] 2025-10-12 21:48:45,900 | INFO     | . payload execution = 10831 s
[2025-10-12 17:49:19] 2025-10-12 21:48:45,901 | INFO     | . stage-out = 2 s
[2025-10-12 17:49:19] 2025-10-12 21:48:45,901 | INFO     | . log creation = 0 s
[2025-10-12 17:49:19] 2025-10-12 21:48:45,901 | INFO     | ..............................
[2025-10-12 17:49:19] 2025-10-12 21:48:46,006 | INFO     | 
[2025-10-12 17:49:19] 2025-10-12 21:48:46,007 | INFO     | job summary report
[2025-10-12 17:49:19] 2025-10-12 21:48:46,007 | INFO     | --------------------------------------------------
[2025-10-12 17:49:19] 2025-10-12 21:48:46,007 | INFO     | PanDA job id: 6840429734
[2025-10-12 17:49:19] 2025-10-12 21:48:46,007 | INFO     | task id: 46676269
[2025-10-12 17:49:19] 2025-10-12 21:48:46,007 | INFO     | errors: (none)
[2025-10-12 17:49:19] 2025-10-12 21:48:46,007 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:49:19] 2025-10-12 21:48:46,007 | INFO     | pilot state: finished 
[2025-10-12 17:49:19] 2025-10-12 21:48:46,007 | INFO     | transexitcode: 0
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | exeerrorcode: 0
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | exeerrordiag: 
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | exitcode: 0
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | exitmsg: OK
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | cpuconsumptiontime: 82159 s
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | nevents: 400
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | neventsw: 0
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | pid: 11239
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | pgrp: 11239
[2025-10-12 17:49:19] 2025-10-12 21:48:46,008 | INFO     | corecount: 8
[2025-10-12 17:49:19] 2025-10-12 21:48:46,009 | INFO     | event service: False
[2025-10-12 17:49:19] 2025-10-12 21:48:46,009 | INFO     | sizes: {0: 2348022, 1: 2348878, 5: 2349140, 12: 2349196, 10840: 2378294, 10843: 2387292, 10846: 2387476, 10851: 2387734}
[2025-10-12 17:49:19] 2025-10-12 21:48:46,009 | INFO     | --------------------------------------------------
[2025-10-12 17:49:19] 2025-10-12 21:48:46,009 | INFO     | 
[2025-10-12 17:49:19] 2025-10-12 21:48:46,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:49:19] 2025-10-12 21:48:46,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,031 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:49:19] 2025-10-12 21:48:46,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,031 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:49:19] 2025-10-12 21:48:46,031 | INFO     | job 6840429734 has completed (purged errors)
[2025-10-12 17:49:19] 2025-10-12 21:48:46,031 | INFO     | overall cleanup function is called
[2025-10-12 17:49:19] 2025-10-12 21:48:47,038 | INFO     | --- collectZombieJob: --- 10, [11239]
[2025-10-12 17:49:19] 2025-10-12 21:48:47,038 | INFO     | zombie collector waiting for pid 11239
[2025-10-12 17:49:19] 2025-10-12 21:48:47,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:49:19] 2025-10-12 21:48:47,039 | INFO     | collected zombie processes
[2025-10-12 17:49:19] 2025-10-12 21:48:47,039 | INFO     | will attempt to kill all subprocesses of pid=11239
[2025-10-12 17:49:19] 2025-10-12 21:48:47,168 | INFO     | process IDs to be killed: [11239] (in reverse order)
[2025-10-12 17:49:19] 2025-10-12 21:48:47,227 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:49:19] 2025-10-12 21:48:47,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:49:19] 2025-10-12 21:48:47,232 | INFO     | did not find any defunct processes belonging to 11239
[2025-10-12 17:49:19] 2025-10-12 21:48:47,237 | INFO     | did not find any defunct processes belonging to 11239
[2025-10-12 17:49:19] 2025-10-12 21:48:47,238 | INFO     | ready for new job
[2025-10-12 17:49:19] 2025-10-12 21:48:47,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:49:19] 2025-10-12 21:48:47,240 | INFO     | ***************************************
[2025-10-12 17:49:19] 2025-10-12 21:48:47,240 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:49:19] 2025-10-12 21:48:47,240 | INFO     | ***************************************
[2025-10-12 17:49:19] 2025-10-12 21:48:47,240 | INFO     | 
[2025-10-12 17:49:19] 2025-10-12 21:48:47,242 | INFO     | architecture information:
[2025-10-12 17:49:19] 2025-10-12 21:48:47,242 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:49:19] 2025-10-12 21:48:47,259 | INFO     | cat /etc/os-release:
[2025-10-12 17:49:19] NAME="CentOS Linux"
[2025-10-12 17:49:19] VERSION="7 (Core)"
[2025-10-12 17:49:19] ID="centos"
[2025-10-12 17:49:19] ID_LIKE="rhel fedora"
[2025-10-12 17:49:19] VERSION_ID="7"
[2025-10-12 17:49:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:49:19] ANSI_COLOR="0;31"
[2025-10-12 17:49:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:49:19] HOME_URL="https://www.centos.org/"
[2025-10-12 17:49:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:49:19] 
[2025-10-12 17:49:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:49:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:49:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:49:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:49:19] 
[2025-10-12 17:49:19] 2025-10-12 21:48:47,259 | INFO     | ***************************************
[2025-10-12 17:49:19] 2025-10-12 21:48:47,762 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:49:19] 2025-10-12 21:48:47,784 | INFO     | sufficient remaining disk space (28423749632 B)
[2025-10-12 17:49:19] 2025-10-12 21:48:47,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:49:19] 2025-10-12 21:48:47,786 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:49:19] 2025-10-12 21:48:47,786 | INFO     | update_server=False
[2025-10-12 17:49:19] 2025-10-12 21:48:47,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:49:19] 2025-10-12 21:48:47,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:49:19] 2025-10-12 21:48:47,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:49:19] 2025-10-12 21:48:48,229 | INFO     | all data control threads have been joined
[2025-10-12 17:49:19] 2025-10-12 21:48:48,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:49:19] 2025-10-12 21:48:48,341 | INFO     | aborting loop
[2025-10-12 17:49:19] 2025-10-12 21:48:48,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:49:19] 2025-10-12 21:48:48,788 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:48,789 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:48,980 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:48,981 | INFO     | all job control threads have been joined
[2025-10-12 17:49:19] 2025-10-12 21:48:49,122 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:49,179 | INFO     | all payload control threads have been joined
[2025-10-12 17:49:19] 2025-10-12 21:48:49,234 | INFO     | [data] control thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:49,310 | INFO     | [job] validate thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:49,346 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:49,606 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:49,711 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:49,715 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:49,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:49,986 | INFO     | [job] control thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:50,077 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:50,184 | INFO     | [payload] control thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:50,710 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:51,795 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:49:19] 2025-10-12 21:48:57,381 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:49:19] 2025-10-12 21:48:58,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692915025728)>', '<ExcThread(monitor, started 139692267796224)>']
[2025-10-12 17:49:19] 2025-10-12 21:49:03,650 | INFO     | all workflow threads have been joined
[2025-10-12 17:49:19] 2025-10-12 21:49:03,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:49:19] 2025-10-12 21:49:03,651 | INFO     | traces error code: 0
[2025-10-12 17:49:19] 2025-10-12 21:49:03,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:49:19] 2025-10-12 21:49:19,037 | INFO     | PID=4791 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 17:49:19] 2025-10-12 21:49:19,037 | INFO     | .. there are 3 such processes running
[2025-10-12 17:49:19] 2025-10-12 21:49:19,038 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:49:19] 2025-10-12 21:49:19,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:49:19] 2025-10-12 21:49:19,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:49:19] 2025-10-12 21:49:19,038 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:49:19] 2025-10-12 21:49:19,038 | INFO     | [monitor] control thread has ended
[2025-10-12 17:49:19] 2025-10-12 21:49:19,139 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:49:19] 2025-10-12 21:49:19,145 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:49:19] 2025-10-12 21:49:19,148 [wrapper] pilotpid: 4791
[2025-10-12 17:49:19] 2025-10-12 21:49:19,150 [wrapper] Pilot exit status: 0
[2025-10-12 17:49:19] 2025-10-12 21:49:19,159 [wrapper] pandaids: 6840429734
[2025-10-12 17:49:19] 2025-10-12 21:49:19,200 [wrapper] cleanup supervisor_pilot 24737 4792
[2025-10-12 17:49:19] 2025-10-12 21:49:19,202 [wrapper] Test setup, not cleaning
[2025-10-12 17:49:19] 2025-10-12 21:49:19,205 [wrapper] apfmon messages muted
[2025-10-12 17:49:19] 2025-10-12 21:49:19,207 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:49:19] 2025-10-12 21:49:19,209 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:49:19]  *** Error codes and diagnostics ***
[2025-10-12 17:49:19]     "exeErrorCode": 0,
[2025-10-12 17:49:19]     "exeErrorDiag": "",
[2025-10-12 17:49:19]     "pilotErrorCode": 0,
[2025-10-12 17:49:19]     "pilotErrorDiag": "",
[2025-10-12 17:49:19]  *** Listing of results directory ***
[2025-10-12 17:49:19] total 418036
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-12 17:49:19] -rwx------ 1 boincer umatlas     36292 Oct 12 13:24 runpilot2-wrapper.sh
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:24 queuedata.json
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:49:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:47 run_atlas
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:47 job.xml
[2025-10-12 17:49:19] -rw-r--r-- 2 boincer umatlas 223073679 Oct 12 14:47 EVNT.46676267._004819.pool.root.1
[2025-10-12 17:49:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:47 start_atlas.sh
[2025-10-12 17:49:19] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:47 shared
[2025-10-12 17:49:19] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 14:47 input.tar.gz
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:47 boinc_lockfile
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas      2546 Oct 12 14:47 pandaJob.out
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas    975528 Oct 12 14:47 agis_schedconf.cvmfs.json
[2025-10-12 17:49:19] drwx------ 5 boincer umatlas      4096 Oct 12 14:47 pilot3
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 17:47 init_data.xml
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas 197250410 Oct 12 17:48 HITS.46676269._084847.pool.root.1
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas       530 Oct 12 17:48 boinc_task_state.xml
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas        95 Oct 12 17:48 pilot_heartbeat.json
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas      1054 Oct 12 17:48 memory_monitor_summary.json
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas   1560580 Oct 12 17:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas    399241 Oct 12 17:48 log.46676269._084847.job.log.tgz.1
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas      7868 Oct 12 17:48 heartbeat.json
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas        28 Oct 12 17:49 wrapper_checkpoint.txt
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:49 boinc_mmap_file
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas       819 Oct 12 17:49 pilotlog.txt
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas   1523525 Oct 12 17:49 log.46676269._084847.job.log.1
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas       357 Oct 12 17:49 output.list
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:49 runtime_log
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas   1945600 Oct 12 17:49 result.tar.gz
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 17:49 runtime_log.err
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas       661 Oct 12 17:49 AXALDmNzES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLVUMDmz5GRWm.diag
[2025-10-12 17:49:19] -rw-r--r-- 1 boincer umatlas     21102 Oct 12 17:49 stderr.txt
[2025-10-12 17:49:19] HITS file was successfully produced:
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas 197250410 Oct 12 17:48 shared/HITS.pool.root.1
[2025-10-12 17:49:19]  *** Contents of shared directory: ***
[2025-10-12 17:49:19] total 412956
[2025-10-12 17:49:19] -rw-r--r-- 2 boincer umatlas 223073679 Oct 12 14:47 ATLAS.root_0
[2025-10-12 17:49:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:47 start_atlas.sh
[2025-10-12 17:49:19] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 14:47 input.tar.gz
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas 197250410 Oct 12 17:48 HITS.pool.root.1
[2025-10-12 17:49:19] -rw------- 1 boincer umatlas   1945600 Oct 12 17:49 result.tar.gz
17:49:21 (895): run_atlas exited; CPU time 82291.491661
17:49:21 (895): called boinc_finish(0)

</stderr_txt>
]]>

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