Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:37 (367950): wrapper (7.7.26015): starting
14:47:37 (367950): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 14:47:37] Arguments: --nthreads 12
[2025-10-12 14:47:37] Threads: 12
[2025-10-12 14:47:37] Checking for CVMFS
[2025-10-12 14:47:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:47:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:47:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:47:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:47:41] 2.8.1.0 368098 0 29332 151631 3 1 3244298 4096000 0 130560 0 0 100.000 1 1 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 14:47:41] CVMFS is ok
[2025-10-12 14:47:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:47:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:47:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 14:47:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 14:47:41] Further information can be found at the LHC@home message board.
[2025-10-12 14:47:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:47:41] Checking for apptainer binary...
[2025-10-12 14:47:41] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 14:47:41] apptainer is not installed, using version from CVMFS
[2025-10-12 14:47:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:47:41] farmville.blisteringsheep.pec
[2025-10-12 14:47:41] apptainer works
[2025-10-12 14:47:41] Set ATHENA_PROC_NUMBER=12
[2025-10-12 14:47:41] Set ATHENA_CORE_NUMBER=12
[2025-10-12 14:47:41] Starting ATLAS job with PandaID=6840429384
[2025-10-12 14:47:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:52:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:52:09]  replicas=None
[2025-10-12 15:52:09]  scope=mc23_13p6TeV
[2025-10-12 15:52:09]  status=None
[2025-10-12 15:52:09]  status_code=0
[2025-10-12 15:52:09]  storage_token=
[2025-10-12 15:52:09]  surl=/var/lib/boinc/slots/24/PanDA_Pilot-6840429384/log.46676269._084730.job.log.tgz.1
[2025-10-12 15:52:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/a4/log.46676269._084730.job.log.tgz.1
[2025-10-12 15:52:09]  workdir=None
[2025-10-12 15:52:09] ]
[2025-10-12 15:52:09] 2025-10-12 19:51:12,896 | INFO     | transferring file log.46676269._084730.job.log.tgz.1 from /var/lib/boinc/slots/24/PanDA_Pilot-6840429384/log.46676269._084730.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 15:52:09] 2025-10-12 19:51:12,896 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/24/PanDA_Pilot-6840429384/log.46676269._084730.job.log.tgz.1 /var/lib/boinc/slots/24/log.46676269._084730.j
[2025-10-12 15:52:09] 2025-10-12 19:51:12,914 | INFO     | adding to output.list: log.46676269._084730.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/a4/log.46676269._084730.job.log.tg
[2025-10-12 15:52:09] 2025-10-12 19:51:12,914 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:52:09] 2025-10-12 19:51:12,915 | INFO     | summary of transferred files:
[2025-10-12 15:52:09] 2025-10-12 19:51:12,915 | INFO     |  -- lfn=log.46676269._084730.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:52:09] 2025-10-12 19:51:12,915 | INFO     | stage-out finished correctly
[2025-10-12 15:52:09] 2025-10-12 19:51:14,368 | INFO     | time since job start (3797s) is within the limit (172800.0s)
[2025-10-12 15:52:09] 2025-10-12 19:51:14,750 | INFO     | monitor loop #283: job 0:6840429384 is in state 'finished'
[2025-10-12 15:52:09] 2025-10-12 19:51:14,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:52:09] 2025-10-12 19:51:16,052 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:52:09] 2025-10-12 19:51:16,373 | INFO     | time since job start (3799s) is within the limit (172800.0s)
[2025-10-12 15:52:09] 2025-10-12 19:51:17,253 | INFO     | monitor loop #284: job 0:6840429384 is in state 'finished'
[2025-10-12 15:52:09] 2025-10-12 19:51:17,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:52:09] 2025-10-12 19:51:17,404 | INFO     | job 6840429384 has state=finished
[2025-10-12 15:52:09] 2025-10-12 19:51:17,405 | INFO     | preparing for final server update for job 6840429384 in state='finished'
[2025-10-12 15:52:09] 2025-10-12 19:51:17,405 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:52:09] 2025-10-12 19:51:17,405 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:52:09] 2025-10-12 19:51:17,405 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:52:09] 2025-10-12 19:51:17,405 | INFO     | job 6840429384 has finished - writing final server update
[2025-10-12 15:52:09] 2025-10-12 19:51:17,405 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:52:09] 2025-10-12 19:51:17,406 | INFO     | executing command: lscpu
[2025-10-12 15:52:09] 2025-10-12 19:51:17,437 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:52:09] 2025-10-12 19:51:18,378 | INFO     | time since job start (3801s) is within the limit (172800.0s)
[2025-10-12 15:52:09] 2025-10-12 19:51:19,756 | INFO     | monitor loop #285: job 0:6840429384 is in state 'finished'
[2025-10-12 15:52:09] 2025-10-12 19:51:19,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:52:09] 2025-10-12 19:51:20,384 | INFO     | time since job start (3803s) is within the limit (172800.0s)
[2025-10-12 15:52:09] 2025-10-12 19:51:20,473 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 15:52:09] 2025-10-12 19:51:20,480 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2962.3381041666667
[2025-10-12 15:52:09] 2025-10-12 19:51:20,487 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6840429384/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:52:09] 2025-10-12 19:51:20,488 | INFO     | extracted standard info from prmon json
[2025-10-12 15:52:09] 2025-10-12 19:51:20,488 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:52:09] 2025-10-12 19:51:20,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:52:09] 2025-10-12 19:51:20,488 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:52:09] 2025-10-12 19:51:20,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:52:09] 2025-10-12 19:51:20,490 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:52:09] 2025-10-12 19:51:20,490 | INFO     | sum of square deviations: 51573060.0
[2025-10-12 15:52:09] 2025-10-12 19:51:20,491 | INFO     | sum of deviations: -1604885112.0
[2025-10-12 15:52:09] 2025-10-12 19:51:20,491 | INFO     | mean x: 1760296853.0
[2025-10-12 15:52:09] 2025-10-12 19:51:20,491 | INFO     | mean y: 2789322.018181818
[2025-10-12 15:52:09] 2025-10-12 19:51:20,491 | INFO     | -- intersect: 54780888819.70462
[2025-10-12 15:52:09] 2025-10-12 19:51:20,491 | INFO     | intersect: 54780888819.70462
[2025-10-12 15:52:09] 2025-10-12 19:51:20,491 | INFO     | chi2: 0.0112657988105784
[2025-10-12 15:52:09] 2025-10-12 19:51:20,491 | INFO     | -- intersect: 54780888819.70462
[2025-10-12 15:52:09] 2025-10-12 19:51:20,491 | INFO     | current memory leak: -31.12 B/s (using 55 data points, chi2=0.01)
[2025-10-12 15:52:09] 2025-10-12 19:51:20,492 | INFO     | could have reported an average CPU frequency of 2949 MHz (6 samples)
[2025-10-12 15:52:09] 2025-10-12 19:51:20,492 | INFO     | ..............................
[2025-10-12 15:52:09] 2025-10-12 19:51:20,492 | INFO     | . Timing measurements:
[2025-10-12 15:52:09] 2025-10-12 19:51:20,492 | INFO     | . get job = 0 s
[2025-10-12 15:52:09] 2025-10-12 19:51:20,492 | INFO     | . initial setup = 3 s
[2025-10-12 15:52:09] 2025-10-12 19:51:20,492 | INFO     | . payload setup = 5 s
[2025-10-12 15:52:09] 2025-10-12 19:51:20,492 | INFO     | . stage-in = 0 s
[2025-10-12 15:52:09] 2025-10-12 19:51:20,492 | INFO     | . payload execution = 3770 s
[2025-10-12 15:52:09] 2025-10-12 19:51:20,492 | INFO     | . stage-out = 0 s
[2025-10-12 15:52:09] 2025-10-12 19:51:20,493 | INFO     | . log creation = 0 s
[2025-10-12 15:52:09] 2025-10-12 19:51:20,493 | INFO     | ..............................
[2025-10-12 15:52:09] 2025-10-12 19:51:20,581 | INFO     | 
[2025-10-12 15:52:09] 2025-10-12 19:51:20,581 | INFO     | job summary report
[2025-10-12 15:52:09] 2025-10-12 19:51:20,581 | INFO     | --------------------------------------------------
[2025-10-12 15:52:09] 2025-10-12 19:51:20,581 | INFO     | PanDA job id: 6840429384
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | task id: 46676269
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | errors: (none)
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | pilot state: finished 
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | transexitcode: 0
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | exeerrorcode: 0
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | exeerrordiag: 
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | exitcode: 0
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | exitmsg: OK
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | cpuconsumptiontime: 40979 s
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | nevents: 400
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | neventsw: 0
[2025-10-12 15:52:09] 2025-10-12 19:51:20,582 | INFO     | pid: 379813
[2025-10-12 15:52:09] 2025-10-12 19:51:20,583 | INFO     | pgrp: 379813
[2025-10-12 15:52:09] 2025-10-12 19:51:20,583 | INFO     | corecount: 12
[2025-10-12 15:52:09] 2025-10-12 19:51:20,583 | INFO     | event service: False
[2025-10-12 15:52:09] 2025-10-12 19:51:20,583 | INFO     | sizes: {0: 2348687, 1: 2348886, 4: 2349148, 11: 2349176, 3779: 2375020, 3781: 2384020, 3784: 2384204, 3789: 2384398}
[2025-10-12 15:52:09] 2025-10-12 19:51:20,583 | INFO     | --------------------------------------------------
[2025-10-12 15:52:09] 2025-10-12 19:51:20,583 | INFO     | 
[2025-10-12 15:52:09] 2025-10-12 19:51:20,583 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-10-12 15:52:09] 2025-10-12 19:51:20,603 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,605 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,605 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:52:09] 2025-10-12 19:51:20,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:52:09] 2025-10-12 19:51:20,605 | INFO     | job 6840429384 has completed (purged errors)
[2025-10-12 15:52:09] 2025-10-12 19:51:20,605 | INFO     | overall cleanup function is called
[2025-10-12 15:52:09] 2025-10-12 19:51:21,611 | INFO     | --- collectZombieJob: --- 10, [379813]
[2025-10-12 15:52:09] 2025-10-12 19:51:21,612 | INFO     | zombie collector waiting for pid 379813
[2025-10-12 15:52:09] 2025-10-12 19:51:21,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:52:09] 2025-10-12 19:51:21,612 | INFO     | collected zombie processes
[2025-10-12 15:52:09] 2025-10-12 19:51:21,612 | INFO     | will attempt to kill all subprocesses of pid=379813
[2025-10-12 15:52:09] 2025-10-12 19:51:21,839 | INFO     | process IDs to be killed: [379813] (in reverse order)
[2025-10-12 15:52:09] 2025-10-12 19:51:21,893 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:52:09] 2025-10-12 19:51:21,893 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:52:09] 2025-10-12 19:51:21,900 | INFO     | did not find any defunct processes belonging to 379813
[2025-10-12 15:52:09] 2025-10-12 19:51:21,908 | INFO     | did not find any defunct processes belonging to 379813
[2025-10-12 15:52:09] 2025-10-12 19:51:21,908 | INFO     | ready for new job
[2025-10-12 15:52:09] 2025-10-12 19:51:21,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:52:09] 2025-10-12 19:51:21,910 | INFO     | ***************************************
[2025-10-12 15:52:09] 2025-10-12 19:51:21,910 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:52:09] 2025-10-12 19:51:21,910 | INFO     | ***************************************
[2025-10-12 15:52:09] 2025-10-12 19:51:21,910 | INFO     | 
[2025-10-12 15:52:09] 2025-10-12 19:51:21,912 | INFO     | architecture information:
[2025-10-12 15:52:09] 2025-10-12 19:51:21,913 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:52:09] 2025-10-12 19:51:21,925 | INFO     | cat /etc/os-release:
[2025-10-12 15:52:09] NAME="CentOS Linux"
[2025-10-12 15:52:09] VERSION="7 (Core)"
[2025-10-12 15:52:09] ID="centos"
[2025-10-12 15:52:09] ID_LIKE="rhel fedora"
[2025-10-12 15:52:09] VERSION_ID="7"
[2025-10-12 15:52:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:52:09] ANSI_COLOR="0;31"
[2025-10-12 15:52:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:52:09] HOME_URL="https://www.centos.org/"
[2025-10-12 15:52:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:52:09] 
[2025-10-12 15:52:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:52:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:52:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:52:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:52:09] 
[2025-10-12 15:52:09] 2025-10-12 19:51:21,925 | INFO     | ***************************************
[2025-10-12 15:52:09] 2025-10-12 19:51:22,427 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-10-12 15:52:09] 2025-10-12 19:51:22,443 | INFO     | sufficient remaining disk space (399076491264 B)
[2025-10-12 15:52:09] 2025-10-12 19:51:22,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:52:09] 2025-10-12 19:51:22,443 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:52:09] 2025-10-12 19:51:22,443 | INFO     | update_server=False
[2025-10-12 15:52:09] 2025-10-12 19:51:22,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:52:09] 2025-10-12 19:51:22,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:52:09] 2025-10-12 19:51:22,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:52:09] 2025-10-12 19:51:22,754 | INFO     | all job control threads have been joined
[2025-10-12 15:52:09] 2025-10-12 19:51:22,782 | INFO     | all data control threads have been joined
[2025-10-12 15:52:09] 2025-10-12 19:51:23,121 | INFO     | all payload control threads have been joined
[2025-10-12 15:52:09] 2025-10-12 19:51:23,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:52:09] 2025-10-12 19:51:23,265 | INFO     | aborting loop
[2025-10-12 15:52:09] 2025-10-12 19:51:23,446 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:23,448 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:23,497 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:23,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:52:09] 2025-10-12 19:51:23,760 | INFO     | [job] control thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:23,787 | INFO     | [data] control thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:23,901 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:24,040 | INFO     | [job] validate thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:24,126 | INFO     | [payload] control thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:24,191 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:24,250 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:24,265 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:24,431 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:24,825 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:25,522 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:26,448 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:33,104 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:52:09] 2025-10-12 19:51:34,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:52:09] 2025-10-12 19:51:53,696 | INFO     | PID=372599 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 15:52:09] 2025-10-12 19:51:53,696 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:52:09] 2025-10-12 19:51:53,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:52:09] 2025-10-12 19:51:53,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:52:09] 2025-10-12 19:52:03,408 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:52:09] 2025-10-12 19:52:04,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764507690816)>', '<ExcThread(monitor, started 139764107818752)>']
[2025-10-12 15:52:09] 2025-10-12 19:52:04,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:52:09] 2025-10-12 19:52:04,752 | INFO     | [monitor] control thread has ended
[2025-10-12 15:52:09] 2025-10-12 19:52:09,529 | INFO     | all workflow threads have been joined
[2025-10-12 15:52:09] 2025-10-12 19:52:09,530 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:52:09] 2025-10-12 19:52:09,530 | INFO     | traces error code: 0
[2025-10-12 15:52:09] 2025-10-12 19:52:09,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:52:09] 2025-10-12 19:52:09,666 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:52:09] 2025-10-12 19:52:09,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:52:09] 2025-10-12 19:52:09,670 [wrapper] pilotpid: 372599
[2025-10-12 15:52:09] 2025-10-12 19:52:09,671 [wrapper] Pilot exit status: 0
[2025-10-12 15:52:09] 2025-10-12 19:52:09,678 [wrapper] pandaids: 6840429384
[2025-10-12 15:52:09] 2025-10-12 19:52:09,707 [wrapper] cleanup supervisor_pilot  460741 372600
[2025-10-12 15:52:09] 2025-10-12 19:52:09,708 [wrapper] Test setup, not cleaning
[2025-10-12 15:52:09] 2025-10-12 19:52:09,710 [wrapper] apfmon messages muted
[2025-10-12 15:52:09] 2025-10-12 19:52:09,711 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:52:09] 2025-10-12 19:52:09,713 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:52:09]  *** Error codes and diagnostics ***
[2025-10-12 15:52:09]     "exeErrorCode": 0,
[2025-10-12 15:52:09]     "exeErrorDiag": "",
[2025-10-12 15:52:09]     "pilotErrorCode": 0,
[2025-10-12 15:52:09]     "pilotErrorDiag": "",
[2025-10-12 15:52:09]  *** Listing of results directory ***
[2025-10-12 15:52:09] total 413180
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:24 queuedata.json
[2025-10-12 15:52:09] -rwx------ 1 boinc boinc     36292 Oct 12 13:24 runpilot2-wrapper.sh
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:52:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:47 run_atlas
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:47 job.xml
[2025-10-12 15:52:09] -rw-r--r-- 2 boinc boinc 221045243 Oct 12 14:47 EVNT.46676267._004814.pool.root.1
[2025-10-12 15:52:09] drwxrwx--x 1 boinc boinc        76 Oct 12 14:47 shared
[2025-10-12 15:52:09] -rw-r--r-- 2 boinc boinc    569681 Oct 12 14:47 input.tar.gz
[2025-10-12 15:52:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:47 start_atlas.sh
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:47 boinc_setup_complete
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc      9182 Oct 12 14:47 init_data.xml
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:47 boinc_lockfile
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc      2550 Oct 12 14:47 pandaJob.out
[2025-10-12 15:52:09] -rw------- 1 boinc boinc    975528 Oct 12 14:47 agis_schedconf.cvmfs.json
[2025-10-12 15:52:09] -rw------- 1 boinc boinc   1560580 Oct 12 14:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:52:09] drwx------ 1 boinc boinc       414 Oct 12 14:47 pilot3
[2025-10-12 15:52:09] -rw------- 1 boinc boinc 196299710 Oct 12 15:50 HITS.46676269._084730.pool.root.1
[2025-10-12 15:52:09] -rw------- 1 boinc boinc        95 Oct 12 15:51 pilot_heartbeat.json
[2025-10-12 15:52:09] -rw------- 1 boinc boinc      1046 Oct 12 15:51 memory_monitor_summary.json
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc       529 Oct 12 15:51 boinc_task_state.xml
[2025-10-12 15:52:09] -rw------- 1 boinc boinc    367886 Oct 12 15:51 log.46676269._084730.job.log.tgz.1
[2025-10-12 15:52:09] -rw------- 1 boinc boinc      7835 Oct 12 15:51 heartbeat.json
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:51 boinc_mmap_file
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc        27 Oct 12 15:51 wrapper_checkpoint.txt
[2025-10-12 15:52:09] -rw------- 1 boinc boinc      4821 Oct 12 15:52 pilotlog.txt
[2025-10-12 15:52:09] -rw------- 1 boinc boinc    560472 Oct 12 15:52 log.46676269._084730.job.log.1
[2025-10-12 15:52:09] -rw------- 1 boinc boinc       357 Oct 12 15:52 output.list
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc       620 Oct 12 15:52 runtime_log
[2025-10-12 15:52:09] -rw------- 1 boinc boinc    952320 Oct 12 15:52 result.tar.gz
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc      8804 Oct 12 15:52 runtime_log.err
[2025-10-12 15:52:09] -rw------- 1 boinc boinc       673 Oct 12 15:52 3zvKDmRzES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyskNDmaEjdAo.diag
[2025-10-12 15:52:09] -rw-r--r-- 1 boinc boinc     22139 Oct 12 15:52 stderr.txt
[2025-10-12 15:52:09] HITS file was successfully produced:
[2025-10-12 15:52:09] -rw------- 1 boinc boinc 196299710 Oct 12 15:50 shared/HITS.pool.root.1
[2025-10-12 15:52:09]  *** Contents of shared directory: ***
[2025-10-12 15:52:09] total 409076
[2025-10-12 15:52:09] -rw-r--r-- 2 boinc boinc 221045243 Oct 12 14:47 ATLAS.root_0
[2025-10-12 15:52:09] -rw-r--r-- 2 boinc boinc    569681 Oct 12 14:47 input.tar.gz
[2025-10-12 15:52:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:47 start_atlas.sh
[2025-10-12 15:52:09] -rw------- 1 boinc boinc 196299710 Oct 12 15:50 HITS.pool.root.1
[2025-10-12 15:52:09] -rw------- 1 boinc boinc    952320 Oct 12 15:52 result.tar.gz
15:52:11 (367950): run_atlas exited; CPU time 41051.940857
15:52:11 (367950): called boinc_finish(0)

</stderr_txt>
]]>

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