Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:40:05 (3369821): wrapper (7.7.26015): starting
05:40:05 (3369821): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 05:40:05] Arguments: --nthreads 3
[2025-10-13 05:40:05] Threads: 3
[2025-10-13 05:40:05] Checking for CVMFS
[2025-10-13 05:40:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:40:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:40:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:40:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:40:06] 2.9.2.0 1825770 5139 82952 151647 2 57 30296588 36864001 0 130560 0 4006150 99.991 179999 792 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 05:40:06] CVMFS is ok
[2025-10-13 05:40:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:40:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:40:06] Further information can be found at the LHC@home message board.
[2025-10-13 05:40:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:40:06] Checking for apptainer binary...
[2025-10-13 05:40:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:40:06] Running /usr/bin/apptainer --version
[2025-10-13 05:40:06] apptainer version 1.4.1-1.1
[2025-10-13 05:40:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:40:06] magicA246a
[2025-10-13 05:40:06] apptainer works
[2025-10-13 05:40:06] Set ATHENA_PROC_NUMBER=3
[2025-10-13 05:40:06] Set ATHENA_CORE_NUMBER=3
[2025-10-13 05:40:06] Starting ATLAS job with PandaID=6840225029
[2025-10-13 05:40:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:05:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:05:43] 2025-10-13 05:05:12,064 | INFO     | cat /etc/os-release:
[2025-10-13 07:05:43] NAME="CentOS Linux"
[2025-10-13 07:05:43] VERSION="7 (Core)"
[2025-10-13 07:05:43] ID="centos"
[2025-10-13 07:05:43] ID_LIKE="rhel fedora"
[2025-10-13 07:05:43] VERSION_ID="7"
[2025-10-13 07:05:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:05:43] ANSI_COLOR="0;31"
[2025-10-13 07:05:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:05:43] HOME_URL="https://www.centos.org/"
[2025-10-13 07:05:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:05:43] 
[2025-10-13 07:05:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:05:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:05:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:05:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:05:43] 
[2025-10-13 07:05:43] 2025-10-13 05:05:12,065 | INFO     | ***************************************
[2025-10-13 07:05:43] 2025-10-13 05:05:12,568 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 07:05:43] 2025-10-13 05:05:12,582 | INFO     | sufficient remaining disk space (274243518464 B)
[2025-10-13 07:05:43] 2025-10-13 05:05:12,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:05:43] 2025-10-13 05:05:12,582 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:05:43] 2025-10-13 05:05:12,582 | INFO     | update_server=False
[2025-10-13 07:05:43] 2025-10-13 05:05:12,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:05:43] 2025-10-13 05:05:12,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:05:43] 2025-10-13 05:05:13,048 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:05:43] 2025-10-13 05:05:13,048 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:05:43] 2025-10-13 05:05:13,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:05:43] 2025-10-13 05:05:13,048 | INFO     | will abort loop
[2025-10-13 07:05:43] 2025-10-13 05:05:13,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:05:43] 2025-10-13 05:05:13,585 | INFO     | all data control threads have been joined
[2025-10-13 07:05:43] 2025-10-13 05:05:13,588 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:13,723 | INFO     | all payload control threads have been joined
[2025-10-13 07:05:43] 2025-10-13 05:05:13,828 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:14,054 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:14,083 | INFO     | all job control threads have been joined
[2025-10-13 07:05:43] 2025-10-13 05:05:14,166 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:14,589 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:14,591 | INFO     | [data] control thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:14,599 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:14,729 | INFO     | [payload] control thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:14,741 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:14,959 | INFO     | [job] validate thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:15,031 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:15,082 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:15,088 | INFO     | [job] control thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:15,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:05:43] 2025-10-13 05:05:16,487 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:17,362 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:17,855 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:05:43] 2025-10-13 05:05:22,674 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:05:43] 2025-10-13 05:05:23,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:05:43] 2025-10-13 05:05:25,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524569286464)>', '<ExcThread(monitor, started 140523763373824)>']
[2025-10-13 07:05:43] 2025-10-13 05:05:30,344 | INFO     | all workflow threads have been joined
[2025-10-13 07:05:43] 2025-10-13 05:05:30,344 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:05:43] 2025-10-13 05:05:30,344 | INFO     | traces error code: 0
[2025-10-13 07:05:43] 2025-10-13 05:05:30,344 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:05:43] 2025-10-13 05:05:43,117 | INFO     | PID=3373548 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:05:43] 2025-10-13 05:05:43,118 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:05:43] 2025-10-13 05:05:43,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:05:43] 2025-10-13 05:05:43,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:05:43] 2025-10-13 05:05:43,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:05:43] 2025-10-13 05:05:43,118 | INFO     | [monitor] control thread has ended
[2025-10-13 07:05:43] 2025-10-13 05:05:43,170 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:05:43] 2025-10-13 05:05:43,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:05:43] 2025-10-13 05:05:43,175 [wrapper] pilotpid: 3373548
[2025-10-13 07:05:43] 2025-10-13 05:05:43,177 [wrapper] Pilot exit status: 0
[2025-10-13 07:05:43] 2025-10-13 05:05:43,185 [wrapper] pandaids: 6840225029
[2025-10-13 07:05:43] 2025-10-13 05:05:43,204 [wrapper] cleanup supervisor_pilot 3392494 3373549
[2025-10-13 07:05:43] 2025-10-13 05:05:43,207 [wrapper] Test setup, not cleaning
[2025-10-13 07:05:43] 2025-10-13 05:05:43,209 [wrapper] apfmon messages muted
[2025-10-13 07:05:43] 2025-10-13 05:05:43,212 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:05:43] 2025-10-13 05:05:43,214 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:05:43]  *** Error codes and diagnostics ***
[2025-10-13 07:05:43]     "exeErrorCode": 0,
[2025-10-13 07:05:43]     "exeErrorDiag": "",
[2025-10-13 07:05:43]     "pilotErrorCode": 0,
[2025-10-13 07:05:43]     "pilotErrorDiag": "",
[2025-10-13 07:05:43]  *** Listing of results directory ***
[2025-10-13 07:05:43] total 420036
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc      5112 Oct 12 17:38 queuedata.json
[2025-10-13 07:05:43] -rwx------ 1 boinc boinc     36292 Oct 12 17:38 runpilot2-wrapper.sh
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:05:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:40 run_atlas
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:40 job.xml
[2025-10-13 07:05:43] -rw-r--r-- 2 boinc boinc 220889195 Oct 13 05:40 EVNT.46676267._004575.pool.root.1
[2025-10-13 07:05:43] -rw-r--r-- 2 boinc boinc    569679 Oct 13 05:40 input.tar.gz
[2025-10-13 07:05:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:40 start_atlas.sh
[2025-10-13 07:05:43] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:40 shared
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:40 boinc_setup_complete
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc      6449 Oct 13 05:40 init_data.xml
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:40 boinc_lockfile
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:40 pandaJob.out
[2025-10-13 07:05:43] -rw------- 1 boinc boinc    974373 Oct 13 05:40 agis_schedconf.cvmfs.json
[2025-10-13 07:05:43] -rw------- 1 boinc boinc   1560580 Oct 13 05:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:05:43] drwx------ 5 boinc boinc      4096 Oct 13 05:40 pilot3
[2025-10-13 07:05:43] -rw------- 1 boinc boinc 203345149 Oct 13 07:04 HITS.46676269._082323.pool.root.1
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc       529 Oct 13 07:04 boinc_task_state.xml
[2025-10-13 07:05:43] -rw------- 1 boinc boinc      1015 Oct 13 07:04 memory_monitor_summary.json
[2025-10-13 07:05:43] -rw------- 1 boinc boinc    251812 Oct 13 07:05 log.46676269._082323.job.log.tgz.1
[2025-10-13 07:05:43] -rw------- 1 boinc boinc      7761 Oct 13 07:05 heartbeat.json
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:05 boinc_mmap_file
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:05 wrapper_checkpoint.txt
[2025-10-13 07:05:43] -rw------- 1 boinc boinc       747 Oct 13 07:05 pilotlog.txt
[2025-10-13 07:05:43] -rw------- 1 boinc boinc        95 Oct 13 07:05 pilot_heartbeat.json
[2025-10-13 07:05:43] -rw------- 1 boinc boinc    746665 Oct 13 07:05 log.46676269._082323.job.log.1
[2025-10-13 07:05:43] -rw------- 1 boinc boinc       357 Oct 13 07:05 output.list
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:05 runtime_log
[2025-10-13 07:05:43] -rw------- 1 boinc boinc   1013760 Oct 13 07:05 result.tar.gz
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc      8797 Oct 13 07:05 runtime_log.err
[2025-10-13 07:05:43] -rw------- 1 boinc boinc       662 Oct 13 07:05 IwOLDmSKDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwRkNDmXzKxun.diag
[2025-10-13 07:05:43] -rw-r--r-- 1 boinc boinc      9114 Oct 13 07:05 stderr.txt
[2025-10-13 07:05:43] HITS file was successfully produced:
[2025-10-13 07:05:43] -rw------- 1 boinc boinc 203345149 Oct 13 07:04 shared/HITS.pool.root.1
[2025-10-13 07:05:43]  *** Contents of shared directory: ***
[2025-10-13 07:05:43] total 415872
[2025-10-13 07:05:43] -rw-r--r-- 2 boinc boinc 220889195 Oct 13 05:40 ATLAS.root_0
[2025-10-13 07:05:43] -rw-r--r-- 2 boinc boinc    569679 Oct 13 05:40 input.tar.gz
[2025-10-13 07:05:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:40 start_atlas.sh
[2025-10-13 07:05:43] -rw------- 1 boinc boinc 203345149 Oct 13 07:04 HITS.pool.root.1
[2025-10-13 07:05:43] -rw------- 1 boinc boinc   1013760 Oct 13 07:05 result.tar.gz
07:05:44 (3369821): run_atlas exited; CPU time 14576.894813
07:05:44 (3369821): called boinc_finish(0)

</stderr_txt>
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