Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:05:50 (2466561): wrapper (7.7.26015): starting
06:05:50 (2466561): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 06:05:50] Arguments: --nthreads 2
[2025-10-13 06:05:50] Threads: 2
[2025-10-13 06:05:50] Checking for CVMFS
[2025-10-13 06:05:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:05:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:05:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:05:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:05:50] 2.9.2.0 1266339 5251 59832 151647 2 57 27580505 36864001 0 130560 0 3168952 99.988 178181 689 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 06:05:50] CVMFS is ok
[2025-10-13 06:05:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:05:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:05:50] Further information can be found at the LHC@home message board.
[2025-10-13 06:05:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:05:50] Checking for apptainer binary...
[2025-10-13 06:05:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:05:50] Running /usr/bin/apptainer --version
[2025-10-13 06:05:50] apptainer version 1.4.1-1.1
[2025-10-13 06:05:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:05:50] atlasA219
[2025-10-13 06:05:50] apptainer works
[2025-10-13 06:05:50] Set ATHENA_PROC_NUMBER=2
[2025-10-13 06:05:50] Set ATHENA_CORE_NUMBER=2
[2025-10-13 06:05:51] Starting ATLAS job with PandaID=6840224754
[2025-10-13 06:05:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:11:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:11:35] 2025-10-13 06:11:04,292 | INFO     | architecture information:
[2025-10-13 08:11:35] 2025-10-13 06:11:04,292 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:11:35] 2025-10-13 06:11:04,302 | INFO     | cat /etc/os-release:
[2025-10-13 08:11:35] NAME="CentOS Linux"
[2025-10-13 08:11:35] VERSION="7 (Core)"
[2025-10-13 08:11:35] ID="centos"
[2025-10-13 08:11:35] ID_LIKE="rhel fedora"
[2025-10-13 08:11:35] VERSION_ID="7"
[2025-10-13 08:11:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:11:35] ANSI_COLOR="0;31"
[2025-10-13 08:11:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:11:35] HOME_URL="https://www.centos.org/"
[2025-10-13 08:11:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:11:35] 
[2025-10-13 08:11:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:11:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:11:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:11:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:11:35] 
[2025-10-13 08:11:35] 2025-10-13 06:11:04,302 | INFO     | ***************************************
[2025-10-13 08:11:35] 2025-10-13 06:11:04,805 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 08:11:35] 2025-10-13 06:11:04,817 | INFO     | sufficient remaining disk space (182462709760 B)
[2025-10-13 08:11:35] 2025-10-13 06:11:04,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:11:35] 2025-10-13 06:11:04,818 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:11:35] 2025-10-13 06:11:04,818 | INFO     | update_server=False
[2025-10-13 08:11:35] 2025-10-13 06:11:04,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:11:35] 2025-10-13 06:11:04,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:11:35] 2025-10-13 06:11:04,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:11:35] 2025-10-13 06:11:04,965 | INFO     | all data control threads have been joined
[2025-10-13 08:11:35] 2025-10-13 06:11:05,104 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:11:35] 2025-10-13 06:11:05,105 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:11:35] 2025-10-13 06:11:05,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:11:35] 2025-10-13 06:11:05,105 | INFO     | will abort loop
[2025-10-13 08:11:35] 2025-10-13 06:11:05,297 | INFO     | all job control threads have been joined
[2025-10-13 08:11:35] 2025-10-13 06:11:05,315 | INFO     | all payload control threads have been joined
[2025-10-13 08:11:35] 2025-10-13 06:11:05,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:11:35] 2025-10-13 06:11:05,822 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:05,823 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:05,971 | INFO     | [data] control thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,111 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,135 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,276 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,303 | INFO     | [job] control thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,321 | INFO     | [payload] control thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,571 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,591 | INFO     | [job] validate thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,601 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,675 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,824 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:06,905 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:09,755 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:14,867 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:11:35] 2025-10-13 06:11:15,377 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:11:35] 2025-10-13 06:11:16,383 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:11:35] 2025-10-13 06:11:17,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306597287744)>', '<ExcThread(monitor, started 140305978357504)>']
[2025-10-13 08:11:35] 2025-10-13 06:11:22,388 | INFO     | all workflow threads have been joined
[2025-10-13 08:11:35] 2025-10-13 06:11:22,388 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:11:35] 2025-10-13 06:11:22,389 | INFO     | traces error code: 0
[2025-10-13 08:11:35] 2025-10-13 06:11:22,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:11:35] 2025-10-13 06:11:35,430 | INFO     | PID=2470266 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:11:35] 2025-10-13 06:11:35,430 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:11:35] 2025-10-13 06:11:35,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:11:35] 2025-10-13 06:11:35,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:11:35] 2025-10-13 06:11:35,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:11:35] 2025-10-13 06:11:35,430 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 08:11:35] 2025-10-13 06:11:35,430 | INFO     | [monitor] control thread has ended
[2025-10-13 08:11:35] 2025-10-13 06:11:35,469 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:11:35] 2025-10-13 06:11:35,472 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:11:35] 2025-10-13 06:11:35,474 [wrapper] pilotpid: 2470266
[2025-10-13 08:11:35] 2025-10-13 06:11:35,477 [wrapper] Pilot exit status: 0
[2025-10-13 08:11:35] 2025-10-13 06:11:35,483 [wrapper] pandaids: 6840224754
[2025-10-13 08:11:35] 2025-10-13 06:11:35,496 [wrapper] cleanup supervisor_pilot 2491644 2470267
[2025-10-13 08:11:35] 2025-10-13 06:11:35,499 [wrapper] Test setup, not cleaning
[2025-10-13 08:11:35] 2025-10-13 06:11:35,501 [wrapper] apfmon messages muted
[2025-10-13 08:11:35] 2025-10-13 06:11:35,503 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:11:35] 2025-10-13 06:11:35,505 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:11:35]  *** Error codes and diagnostics ***
[2025-10-13 08:11:35]     "exeErrorCode": 0,
[2025-10-13 08:11:35]     "exeErrorDiag": "",
[2025-10-13 08:11:35]     "pilotErrorCode": 0,
[2025-10-13 08:11:35]     "pilotErrorDiag": "",
[2025-10-13 08:11:35]  *** Listing of results directory ***
[2025-10-13 08:11:35] total 413796
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 08:11:35] -rwx------ 1 boinc boinc     36292 Oct 12 17:20 runpilot2-wrapper.sh
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 17:20 queuedata.json
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:11:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:05 run_atlas
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:05 job.xml
[2025-10-13 08:11:35] -rw-r--r-- 2 boinc boinc 222085889 Oct 13 06:05 EVNT.46676267._004564.pool.root.1
[2025-10-13 08:11:35] -rw-r--r-- 2 boinc boinc    569677 Oct 13 06:05 input.tar.gz
[2025-10-13 08:11:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:05 start_atlas.sh
[2025-10-13 08:11:35] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:05 shared
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:05 boinc_setup_complete
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc      6208 Oct 13 06:05 init_data.xml
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:05 boinc_lockfile
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:05 pandaJob.out
[2025-10-13 08:11:35] -rw------- 1 boinc boinc    974373 Oct 13 06:06 agis_schedconf.cvmfs.json
[2025-10-13 08:11:35] -rw------- 1 boinc boinc   1560580 Oct 13 06:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:11:35] drwx------ 5 boinc boinc      4096 Oct 13 06:06 pilot3
[2025-10-13 08:11:35] -rw------- 1 boinc boinc 195045740 Oct 13 08:10 HITS.46676269._082049.pool.root.1
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc       529 Oct 13 08:10 boinc_task_state.xml
[2025-10-13 08:11:35] -rw------- 1 boinc boinc        95 Oct 13 08:10 pilot_heartbeat.json
[2025-10-13 08:11:35] -rw------- 1 boinc boinc      1017 Oct 13 08:10 memory_monitor_summary.json
[2025-10-13 08:11:35] -rw------- 1 boinc boinc    272222 Oct 13 08:10 log.46676269._082049.job.log.tgz.1
[2025-10-13 08:11:35] -rw------- 1 boinc boinc      7760 Oct 13 08:11 heartbeat.json
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc        27 Oct 13 08:11 wrapper_checkpoint.txt
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:11 boinc_mmap_file
[2025-10-13 08:11:35] -rw------- 1 boinc boinc       817 Oct 13 08:11 pilotlog.txt
[2025-10-13 08:11:35] -rw------- 1 boinc boinc   1082164 Oct 13 08:11 log.46676269._082049.job.log.1
[2025-10-13 08:11:35] -rw------- 1 boinc boinc       357 Oct 13 08:11 output.list
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:11 runtime_log
[2025-10-13 08:11:35] -rw------- 1 boinc boinc   1372160 Oct 13 08:11 result.tar.gz
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc      8792 Oct 13 08:11 runtime_log.err
[2025-10-13 08:11:35] -rw------- 1 boinc boinc       662 Oct 13 08:11 66WNDmT3CS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5FUMDmzMglOo.diag
[2025-10-13 08:11:35] -rw-r--r-- 1 boinc boinc      9388 Oct 13 08:11 stderr.txt
[2025-10-13 08:11:35] HITS file was successfully produced:
[2025-10-13 08:11:35] -rw------- 1 boinc boinc 195045740 Oct 13 08:10 shared/HITS.pool.root.1
[2025-10-13 08:11:35]  *** Contents of shared directory: ***
[2025-10-13 08:11:35] total 409284
[2025-10-13 08:11:35] -rw-r--r-- 2 boinc boinc 222085889 Oct 13 06:05 ATLAS.root_0
[2025-10-13 08:11:35] -rw-r--r-- 2 boinc boinc    569677 Oct 13 06:05 input.tar.gz
[2025-10-13 08:11:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:05 start_atlas.sh
[2025-10-13 08:11:35] -rw------- 1 boinc boinc 195045740 Oct 13 08:10 HITS.pool.root.1
[2025-10-13 08:11:35] -rw------- 1 boinc boinc   1372160 Oct 13 08:11 result.tar.gz
08:11:37 (2466561): run_atlas exited; CPU time 14611.570611
08:11:37 (2466561): called boinc_finish(0)

</stderr_txt>
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