Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:31:56 (3826882): wrapper (7.7.26015): starting
06:31:56 (3826882): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 06:31:56] Arguments: --nthreads 4
[2025-10-13 06:31:56] Threads: 4
[2025-10-13 06:31:56] Checking for CVMFS
[2025-10-13 06:31:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:31:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:31:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:31:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:31:56] 2.9.2.0 1950177 5349 94668 151649 1 57 30314938 36864001 0 130560 0 4909804 99.992 182894 754 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 06:31:56] CVMFS is ok
[2025-10-13 06:31:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:31:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:31:56] Further information can be found at the LHC@home message board.
[2025-10-13 06:31:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:31:56] Checking for apptainer binary...
[2025-10-13 06:31:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:31:56] Running /usr/bin/apptainer --version
[2025-10-13 06:31:56] apptainer version 1.4.1-1.1
[2025-10-13 06:31:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:31:56] thA314a
[2025-10-13 06:31:56] apptainer works
[2025-10-13 06:31:56] Set ATHENA_PROC_NUMBER=4
[2025-10-13 06:31:56] Set ATHENA_CORE_NUMBER=4
[2025-10-13 06:31:56] Starting ATLAS job with PandaID=6840429290
[2025-10-13 06:31:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:44:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:44:16] 2025-10-13 05:43:15,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:44:16] 2025-10-13 05:43:15,992 | INFO     | will abort loop
[2025-10-13 07:44:16] 2025-10-13 05:43:16,197 | INFO     | all data control threads have been joined
[2025-10-13 07:44:16] 2025-10-13 05:43:16,245 | INFO     | all payload control threads have been joined
[2025-10-13 07:44:16] 2025-10-13 05:43:16,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:44:16] 2025-10-13 05:43:16,802 | INFO     | all job control threads have been joined
[2025-10-13 07:44:16] 2025-10-13 05:43:16,863 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:16,863 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:16,997 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,095 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,142 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,203 | INFO     | [data] control thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,251 | INFO     | [payload] control thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,303 | INFO     | [job] validate thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,351 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,502 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,760 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,807 | INFO     | [job] control thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:17,864 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:18,037 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:18,142 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:20,566 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:44:16] 2025-10-13 05:43:45,806 | INFO     | PID=3830673 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:44:16] 2025-10-13 05:43:45,807 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:44:16] 2025-10-13 05:43:45,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:44:16] 2025-10-13 05:43:45,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:44:16] 2025-10-13 05:44:09,323 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:44:16] 2025-10-13 05:44:11,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832037066560)>', '<ExcThread(monitor, started 139831107643136)>']
[2025-10-13 07:44:16] 2025-10-13 05:44:11,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:44:16] 2025-10-13 05:44:11,946 | INFO     | [monitor] control thread has ended
[2025-10-13 07:44:16] 2025-10-13 05:44:16,392 | INFO     | all workflow threads have been joined
[2025-10-13 07:44:16] 2025-10-13 05:44:16,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:44:16] 2025-10-13 05:44:16,392 | INFO     | traces error code: 0
[2025-10-13 07:44:16] 2025-10-13 05:44:16,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:44:16] 2025-10-13 05:44:16,462 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:44:16] 2025-10-13 05:44:16,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:44:16] 2025-10-13 05:44:16,470 [wrapper] pilotpid: 3830673
[2025-10-13 07:44:16] 2025-10-13 05:44:16,473 [wrapper] Pilot exit status: 0
[2025-10-13 07:44:16] 2025-10-13 05:44:16,484 [wrapper] pandaids: 6840429290
[2025-10-13 07:44:16] 2025-10-13 05:44:16,505 [wrapper] cleanup supervisor_pilot 3846902 3830674
[2025-10-13 07:44:16] 2025-10-13 05:44:16,509 [wrapper] Test setup, not cleaning
[2025-10-13 07:44:16] 2025-10-13 05:44:16,513 [wrapper] apfmon messages muted
[2025-10-13 07:44:16] 2025-10-13 05:44:16,517 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:44:16] 2025-10-13 05:44:16,520 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:44:16]  *** Error codes and diagnostics ***
[2025-10-13 07:44:16]     "exeErrorCode": 0,
[2025-10-13 07:44:16]     "exeErrorDiag": "",
[2025-10-13 07:44:16]     "pilotErrorCode": 0,
[2025-10-13 07:44:16]     "pilotErrorDiag": "",
[2025-10-13 07:44:16]  *** Listing of results directory ***
[2025-10-13 07:44:16] total 415152
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc    557409 Oct 12 19:17 pilot3.tar.gz
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc      5112 Oct 12 19:20 queuedata.json
[2025-10-13 07:44:16] -rwx------ 1 boinc boinc     36292 Oct 12 19:21 runpilot2-wrapper.sh
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:44:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:31 run_atlas
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:31 job.xml
[2025-10-13 07:44:16] -rw-r--r-- 2 boinc boinc 221770625 Oct 13 06:31 EVNT.46676267._004810.pool.root.1
[2025-10-13 07:44:16] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:31 shared
[2025-10-13 07:44:16] -rw-r--r-- 2 boinc boinc    569681 Oct 13 06:31 input.tar.gz
[2025-10-13 07:44:16] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:31 start_atlas.sh
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:31 boinc_setup_complete
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc      6371 Oct 13 06:31 init_data.xml
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:31 boinc_lockfile
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:31 pandaJob.out
[2025-10-13 07:44:16] -rw------- 1 boinc boinc    974365 Oct 13 06:32 agis_schedconf.cvmfs.json
[2025-10-13 07:44:16] -rw------- 1 boinc boinc   1560580 Oct 13 06:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:44:16] drwx------ 5 boinc boinc      4096 Oct 13 06:32 pilot3
[2025-10-13 07:44:16] -rw------- 1 boinc boinc 197666337 Oct 13 07:42 HITS.46676269._084636.pool.root.1
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc       530 Oct 13 07:42 boinc_task_state.xml
[2025-10-13 07:44:16] -rw------- 1 boinc boinc      1022 Oct 13 07:42 memory_monitor_summary.json
[2025-10-13 07:44:16] -rw------- 1 boinc boinc    262574 Oct 13 07:43 log.46676269._084636.job.log.tgz.1
[2025-10-13 07:44:16] -rw------- 1 boinc boinc      7769 Oct 13 07:43 heartbeat.json
[2025-10-13 07:44:16] -rw------- 1 boinc boinc        95 Oct 13 07:43 pilot_heartbeat.json
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:44 boinc_mmap_file
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:44 wrapper_checkpoint.txt
[2025-10-13 07:44:16] -rw------- 1 boinc boinc      4938 Oct 13 07:44 pilotlog.txt
[2025-10-13 07:44:16] -rw------- 1 boinc boinc    634527 Oct 13 07:44 log.46676269._084636.job.log.1
[2025-10-13 07:44:16] -rw------- 1 boinc boinc       357 Oct 13 07:44 output.list
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:44 runtime_log
[2025-10-13 07:44:16] -rw------- 1 boinc boinc    911360 Oct 13 07:44 result.tar.gz
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc      8782 Oct 13 07:44 runtime_log.err
[2025-10-13 07:44:16] -rw------- 1 boinc boinc       659 Oct 13 07:44 rfBODmKwES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlrkNDmNL6qOn.diag
[2025-10-13 07:44:16] -rw-r--r-- 1 boinc boinc      6939 Oct 13 07:44 stderr.txt
[2025-10-13 07:44:16] HITS file was successfully produced:
[2025-10-13 07:44:16] -rw------- 1 boinc boinc 197666337 Oct 13 07:42 shared/HITS.pool.root.1
[2025-10-13 07:44:16]  *** Contents of shared directory: ***
[2025-10-13 07:44:16] total 411088
[2025-10-13 07:44:16] -rw-r--r-- 2 boinc boinc 221770625 Oct 13 06:31 ATLAS.root_0
[2025-10-13 07:44:16] -rw-r--r-- 2 boinc boinc    569681 Oct 13 06:31 input.tar.gz
[2025-10-13 07:44:16] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:31 start_atlas.sh
[2025-10-13 07:44:16] -rw------- 1 boinc boinc 197666337 Oct 13 07:42 HITS.pool.root.1
[2025-10-13 07:44:16] -rw------- 1 boinc boinc    911360 Oct 13 07:44 result.tar.gz
07:44:17 (3826882): run_atlas exited; CPU time 15909.591367
07:44:17 (3826882): called boinc_finish(0)

</stderr_txt>
]]>

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