Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:41:54 (34641): wrapper (7.7.26015): starting
14:41:54 (34641): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:41:54] Arguments: --nthreads 8
[2025-10-12 14:41:54] Threads: 8
[2025-10-12 14:41:54] Checking for CVMFS
[2025-10-12 14:41:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:41:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:41:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:41:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:41:55] 2.11.2.0 5808 105945 98084 151631 0 59 14969817 18432000 2749 130560 0 66376848 99.978 4078478 4208 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 14:41:55] CVMFS is ok
[2025-10-12 14:41:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:41:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:41:55] Further information can be found at the LHC@home message board.
[2025-10-12 14:41:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:41:55] Checking for apptainer binary...
[2025-10-12 14:41:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:41:55] Running /usr/bin/apptainer --version
[2025-10-12 14:41:55] apptainer version 1.3.2-1.el7
[2025-10-12 14:41:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:41:56] c-9-34.aglt2.org
[2025-10-12 14:41:56] apptainer works
[2025-10-12 14:41:56] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:41:56] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:41:56] Starting ATLAS job with PandaID=6840224734
[2025-10-12 14:41:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:23:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:23:28] 2025-10-12 21:22:30,699 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:23:28] 2025-10-12 21:22:30,699 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:23:28] 2025-10-12 21:22:30,701 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:23:28] 2025-10-12 21:22:30,701 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 17:23:28] 2025-10-12 21:22:30,702 | INFO     | sum of deviations: 12554330547.499998
[2025-10-12 17:23:28] 2025-10-12 21:22:30,702 | INFO     | mean x: 1760299341.5
[2025-10-12 17:23:28] 2025-10-12 21:22:30,702 | INFO     | mean y: 2444209.9430379746
[2025-10-12 17:23:28] 2025-10-12 21:22:30,702 | INFO     | -- intersect: -18067124966.21926
[2025-10-12 17:23:28] 2025-10-12 21:22:30,702 | INFO     | intersect: -18067124966.21926
[2025-10-12 17:23:28] 2025-10-12 21:22:30,702 | INFO     | chi2: 2.082540779319726
[2025-10-12 17:23:28] 2025-10-12 21:22:30,703 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,703 | INFO     | sum of deviations: 22294839797.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,703 | INFO     | mean x: 1760299189.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,703 | INFO     | mean y: 2457055.732026144
[2025-10-12 17:23:28] 2025-10-12 21:22:30,704 | INFO     | -- intersect: -35336740298.86784
[2025-10-12 17:23:28] 2025-10-12 21:22:30,704 | INFO     | intersect: -35336740298.86784
[2025-10-12 17:23:28] 2025-10-12 21:22:30,704 | INFO     | chi2: 1.3058232647391224
[2025-10-12 17:23:28] 2025-10-12 21:22:30,704 | INFO     | current chi2=1.3058232647391224 (change=37.29662930462869 %)
[2025-10-12 17:23:28] 2025-10-12 21:22:30,704 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,705 | INFO     | sum of deviations: 21471061271.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,705 | INFO     | mean x: 1760299036.5
[2025-10-12 17:23:28] 2025-10-12 21:22:30,705 | INFO     | mean y: 2455863.0675675673
[2025-10-12 17:23:28] 2025-10-12 21:22:30,705 | INFO     | -- intersect: -37598269233.86578
[2025-10-12 17:23:28] 2025-10-12 21:22:30,705 | INFO     | intersect: -37598269233.86578
[2025-10-12 17:23:28] 2025-10-12 21:22:30,705 | INFO     | chi2: 1.3066975085659343
[2025-10-12 17:23:28] 2025-10-12 21:22:30,705 | INFO     | current chi2=1.3066975085659343 (change=-0.06694962866866598 %)
[2025-10-12 17:23:28] 2025-10-12 21:22:30,706 | INFO     | right removable region: 147
[2025-10-12 17:23:28] 2025-10-12 21:22:30,706 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,706 | INFO     | sum of deviations: -8817126111.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,706 | INFO     | mean x: 1760299494.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,707 | INFO     | mean y: 2472773.6274509802
[2025-10-12 17:23:28] 2025-10-12 21:22:30,707 | INFO     | -- intersect: 13978362107.756374
[2025-10-12 17:23:28] 2025-10-12 21:22:30,707 | INFO     | intersect: 13978362107.756374
[2025-10-12 17:23:28] 2025-10-12 21:22:30,707 | INFO     | chi2: 0.8250956124935995
[2025-10-12 17:23:28] 2025-10-12 21:22:30,707 | INFO     | current chi2=0.8250956124935995 (change=60.380338253778554 %)
[2025-10-12 17:23:28] 2025-10-12 21:22:30,707 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,708 | INFO     | sum of deviations: -10949214337.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,708 | INFO     | mean x: 1760299646.5
[2025-10-12 17:23:28] 2025-10-12 21:22:30,708 | INFO     | mean y: 2475795.864864865
[2025-10-12 17:23:28] 2025-10-12 21:22:30,708 | INFO     | -- intersect: 19177053884.17218
[2025-10-12 17:23:28] 2025-10-12 21:22:30,708 | INFO     | intersect: 19177053884.17218
[2025-10-12 17:23:28] 2025-10-12 21:22:30,709 | INFO     | chi2: 0.8014961825050361
[2025-10-12 17:23:28] 2025-10-12 21:22:30,709 | INFO     | current chi2=0.8014961825050361 (change=2.8602054878514487 %)
[2025-10-12 17:23:28] 2025-10-12 21:22:30,709 | INFO     | left removable region: 20
[2025-10-12 17:23:28] 2025-10-12 21:22:30,709 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,709 | INFO     | sum of deviations: -1195952458.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,710 | INFO     | mean x: 1760299616.0
[2025-10-12 17:23:28] 2025-10-12 21:22:30,710 | INFO     | mean y: 2490645.8818897638
[2025-10-12 17:23:28] 2025-10-12 21:22:30,710 | INFO     | -- intersect: 3317141966.8215284
[2025-10-12 17:23:28] 2025-10-12 21:22:30,710 | INFO     | intersect: 3317141966.8215284
[2025-10-12 17:23:28] 2025-10-12 21:22:30,710 | INFO     | chi2: 0.0019782395484139723
[2025-10-12 17:23:28] 2025-10-12 21:22:30,710 | INFO     | -- intersect: 3317141966.8215284
[2025-10-12 17:23:28] 2025-10-12 21:22:30,710 | INFO     | current memory leak: -1.88 B/s (using 127 data points, chi2=0.00)
[2025-10-12 17:23:28] 2025-10-12 21:22:30,710 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | ..............................
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | . Timing measurements:
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | . get job = 0 s
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | . initial setup = 2 s
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | . payload setup = 4 s
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | . stage-in = 0 s
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | . payload execution = 9593 s
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | . stage-out = 0 s
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | . log creation = 0 s
[2025-10-12 17:23:28] 2025-10-12 21:22:30,711 | INFO     | ..............................
[2025-10-12 17:23:28] 2025-10-12 21:22:31,225 | INFO     | 
[2025-10-12 17:23:28] 2025-10-12 21:22:31,225 | INFO     | job summary report
[2025-10-12 17:23:28] 2025-10-12 21:22:31,225 | INFO     | --------------------------------------------------
[2025-10-12 17:23:28] 2025-10-12 21:22:31,226 | INFO     | PanDA job id: 6840224734
[2025-10-12 17:23:28] 2025-10-12 21:22:31,226 | INFO     | task id: 46676269
[2025-10-12 17:23:28] 2025-10-12 21:22:31,226 | INFO     | errors: (none)
[2025-10-12 17:23:28] 2025-10-12 21:22:31,226 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:23:28] 2025-10-12 21:22:31,226 | INFO     | pilot state: finished 
[2025-10-12 17:23:28] 2025-10-12 21:22:31,226 | INFO     | transexitcode: 0
[2025-10-12 17:23:28] 2025-10-12 21:22:31,227 | INFO     | exeerrorcode: 0
[2025-10-12 17:23:28] 2025-10-12 21:22:31,227 | INFO     | exeerrordiag: 
[2025-10-12 17:23:28] 2025-10-12 21:22:31,227 | INFO     | exitcode: 0
[2025-10-12 17:23:28] 2025-10-12 21:22:31,227 | INFO     | exitmsg: OK
[2025-10-12 17:23:28] 2025-10-12 21:22:31,227 | INFO     | cpuconsumptiontime: 71941 s
[2025-10-12 17:23:28] 2025-10-12 21:22:31,227 | INFO     | nevents: 400
[2025-10-12 17:23:28] 2025-10-12 21:22:31,227 | INFO     | neventsw: 0
[2025-10-12 17:23:28] 2025-10-12 21:22:31,228 | INFO     | pid: 45836
[2025-10-12 17:23:28] 2025-10-12 21:22:31,228 | INFO     | pgrp: 45836
[2025-10-12 17:23:28] 2025-10-12 21:22:31,228 | INFO     | corecount: 8
[2025-10-12 17:23:28] 2025-10-12 21:22:31,228 | INFO     | event service: False
[2025-10-12 17:23:28] 2025-10-12 21:22:31,228 | INFO     | sizes: {0: 2348685, 1: 2348884, 5: 2349146, 12: 2349202, 9602: 2377738, 9603: 2386736, 9605: 2386920, 9609: 2387178}
[2025-10-12 17:23:28] 2025-10-12 21:22:31,228 | INFO     | --------------------------------------------------
[2025-10-12 17:23:28] 2025-10-12 21:22:31,229 | INFO     | 
[2025-10-12 17:23:28] 2025-10-12 21:22:31,229 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 17:23:28] 2025-10-12 21:22:31,248 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,249 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,249 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,250 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,251 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:23:28] 2025-10-12 21:22:31,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:23:28] 2025-10-12 21:22:31,256 | INFO     | job 6840224734 has completed (purged errors)
[2025-10-12 17:23:28] 2025-10-12 21:22:31,256 | INFO     | overall cleanup function is called
[2025-10-12 17:23:28] 2025-10-12 21:22:32,264 | INFO     | --- collectZombieJob: --- 10, [45836]
[2025-10-12 17:23:28] 2025-10-12 21:22:32,265 | INFO     | zombie collector waiting for pid 45836
[2025-10-12 17:23:28] 2025-10-12 21:22:32,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:23:28] 2025-10-12 21:22:32,265 | INFO     | collected zombie processes
[2025-10-12 17:23:28] 2025-10-12 21:22:32,265 | INFO     | will attempt to kill all subprocesses of pid=45836
[2025-10-12 17:23:28] 2025-10-12 21:22:32,541 | INFO     | process IDs to be killed: [45836] (in reverse order)
[2025-10-12 17:23:28] 2025-10-12 21:22:32,628 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:23:28] 2025-10-12 21:22:32,629 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:23:28] 2025-10-12 21:22:32,639 | INFO     | did not find any defunct processes belonging to 45836
[2025-10-12 17:23:28] 2025-10-12 21:22:32,648 | INFO     | did not find any defunct processes belonging to 45836
[2025-10-12 17:23:28] 2025-10-12 21:22:32,648 | INFO     | ready for new job
[2025-10-12 17:23:28] 2025-10-12 21:22:32,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:23:28] 2025-10-12 21:22:32,650 | INFO     | ***************************************
[2025-10-12 17:23:28] 2025-10-12 21:22:32,651 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:23:28] 2025-10-12 21:22:32,651 | INFO     | ***************************************
[2025-10-12 17:23:28] 2025-10-12 21:22:32,651 | INFO     | 
[2025-10-12 17:23:28] 2025-10-12 21:22:32,652 | INFO     | architecture information:
[2025-10-12 17:23:28] 2025-10-12 21:22:32,653 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:23:28] 2025-10-12 21:22:32,669 | INFO     | cat /etc/os-release:
[2025-10-12 17:23:28] NAME="CentOS Linux"
[2025-10-12 17:23:28] VERSION="7 (Core)"
[2025-10-12 17:23:28] ID="centos"
[2025-10-12 17:23:28] ID_LIKE="rhel fedora"
[2025-10-12 17:23:28] VERSION_ID="7"
[2025-10-12 17:23:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:23:28] ANSI_COLOR="0;31"
[2025-10-12 17:23:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:23:28] HOME_URL="https://www.centos.org/"
[2025-10-12 17:23:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:23:28] 
[2025-10-12 17:23:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:23:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:23:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:23:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:23:28] 
[2025-10-12 17:23:28] 2025-10-12 21:22:32,670 | INFO     | ***************************************
[2025-10-12 17:23:28] 2025-10-12 21:22:33,172 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 17:23:28] 2025-10-12 21:22:33,184 | INFO     | sufficient remaining disk space (104907931648 B)
[2025-10-12 17:23:28] 2025-10-12 21:22:33,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:23:28] 2025-10-12 21:22:33,185 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:23:28] 2025-10-12 21:22:33,185 | INFO     | update_server=False
[2025-10-12 17:23:28] 2025-10-12 21:22:33,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:23:28] 2025-10-12 21:22:33,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:23:28] 2025-10-12 21:22:33,285 | INFO     | all data control threads have been joined
[2025-10-12 17:23:28] 2025-10-12 21:22:33,338 | INFO     | all job control threads have been joined
[2025-10-12 17:23:28] 2025-10-12 21:22:33,435 | INFO     | all payload control threads have been joined
[2025-10-12 17:23:28] 2025-10-12 21:22:33,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:23:28] 2025-10-12 21:22:33,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:23:28] 2025-10-12 21:22:33,994 | INFO     | aborting loop
[2025-10-12 17:23:28] 2025-10-12 21:22:34,190 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:34,289 | INFO     | [data] control thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:34,344 | INFO     | [job] control thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:34,440 | INFO     | [payload] control thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:34,456 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:34,719 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:34,783 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:34,784 | INFO     | [job] validate thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:34,999 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:35,161 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:35,344 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:35,423 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:35,576 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:35,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:23:28] 2025-10-12 21:22:36,817 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:37,192 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:22:43,301 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:23:28] 2025-10-12 21:22:44,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:23:28] 2025-10-12 21:23:03,083 | INFO     | PID=38590 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:23:28] 2025-10-12 21:23:03,083 | INFO     | .. there are 4 such processes running
[2025-10-12 17:23:28] 2025-10-12 21:23:03,084 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:23:28] 2025-10-12 21:23:03,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:23:28] 2025-10-12 21:23:03,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:23:28] 2025-10-12 21:23:22,321 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:23:28] 2025-10-12 21:23:23,350 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673981355840)>', '<ExcThread(monitor, started 140673315493632)>']
[2025-10-12 17:23:28] 2025-10-12 21:23:24,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:23:28] 2025-10-12 21:23:24,193 | INFO     | [monitor] control thread has ended
[2025-10-12 17:23:28] 2025-10-12 21:23:28,375 | INFO     | all workflow threads have been joined
[2025-10-12 17:23:28] 2025-10-12 21:23:28,375 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:23:28] 2025-10-12 21:23:28,376 | INFO     | traces error code: 0
[2025-10-12 17:23:28] 2025-10-12 21:23:28,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:23:28] 2025-10-12 21:23:28,473 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:23:28] 2025-10-12 21:23:28,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:23:28] 2025-10-12 21:23:28,478 [wrapper] pilotpid: 38590
[2025-10-12 17:23:28] 2025-10-12 21:23:28,480 [wrapper] Pilot exit status: 0
[2025-10-12 17:23:28] 2025-10-12 21:23:28,489 [wrapper] pandaids: 6840224734
[2025-10-12 17:23:28] 2025-10-12 21:23:28,555 [wrapper] cleanup supervisor_pilot  6783 38591
[2025-10-12 17:23:28] 2025-10-12 21:23:28,558 [wrapper] Test setup, not cleaning
[2025-10-12 17:23:28] 2025-10-12 21:23:28,561 [wrapper] apfmon messages muted
[2025-10-12 17:23:28] 2025-10-12 21:23:28,563 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:23:28] 2025-10-12 21:23:28,565 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:23:28]  *** Error codes and diagnostics ***
[2025-10-12 17:23:28]     "exeErrorCode": 0,
[2025-10-12 17:23:28]     "exeErrorDiag": "",
[2025-10-12 17:23:28]     "pilotErrorCode": 0,
[2025-10-12 17:23:28]     "pilotErrorDiag": "",
[2025-10-12 17:23:28]  *** Listing of results directory ***
[2025-10-12 17:23:28] total 407316
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 11:15 queuedata.json
[2025-10-12 17:23:28] -rwx------ 1 boincer umatlas     36292 Oct 12 11:15 runpilot2-wrapper.sh
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:23:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:41 run_atlas
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:41 job.xml
[2025-10-12 17:23:28] -rw-r--r-- 2 boincer umatlas 219568459 Oct 12 14:41 EVNT.46676267._004563.pool.root.1
[2025-10-12 17:23:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:41 start_atlas.sh
[2025-10-12 17:23:28] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:41 shared
[2025-10-12 17:23:28] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 14:41 input.tar.gz
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:41 boinc_lockfile
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 14:41 pandaJob.out
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas    975528 Oct 12 14:42 agis_schedconf.cvmfs.json
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas   1560580 Oct 12 14:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:23:28] drwx------ 5 boincer umatlas      4096 Oct 12 14:42 pilot3
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas      6035 Oct 12 17:20 init_data.xml
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas 190113208 Oct 12 17:21 HITS.46676269._082029.pool.root.1
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas      1049 Oct 12 17:22 memory_monitor_summary.json
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas       529 Oct 12 17:22 boinc_task_state.xml
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas    403602 Oct 12 17:22 log.46676269._082029.job.log.tgz.1
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas      7833 Oct 12 17:22 heartbeat.json
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas        95 Oct 12 17:23 pilot_heartbeat.json
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas        27 Oct 12 17:23 wrapper_checkpoint.txt
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:23 boinc_mmap_file
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas      4894 Oct 12 17:23 pilotlog.txt
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas   1344145 Oct 12 17:23 log.46676269._082029.job.log.1
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas       357 Oct 12 17:23 output.list
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:23 runtime_log
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas   1771520 Oct 12 17:23 result.tar.gz
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas      8693 Oct 12 17:23 runtime_log.err
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas       657 Oct 12 17:23 ixlKDmQyCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGFUMDm3UWH7n.diag
[2025-10-12 17:23:28] -rw-r--r-- 1 boincer umatlas     20853 Oct 12 17:23 stderr.txt
[2025-10-12 17:23:28] HITS file was successfully produced:
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas 190113208 Oct 12 17:21 shared/HITS.pool.root.1
[2025-10-12 17:23:28]  *** Contents of shared directory: ***
[2025-10-12 17:23:28] total 402400
[2025-10-12 17:23:28] -rw-r--r-- 2 boincer umatlas 219568459 Oct 12 14:41 ATLAS.root_0
[2025-10-12 17:23:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:41 start_atlas.sh
[2025-10-12 17:23:28] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 14:41 input.tar.gz
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas 190113208 Oct 12 17:21 HITS.pool.root.1
[2025-10-12 17:23:28] -rw------- 1 boincer umatlas   1771520 Oct 12 17:23 result.tar.gz
17:23:30 (34641): run_atlas exited; CPU time 72236.882001
17:23:30 (34641): called boinc_finish(0)

</stderr_txt>
]]>

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