Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:17:04 (2002345): wrapper (7.7.26015): starting
05:17:04 (2002345): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:17:04] Arguments: --nthreads 4
[2025-10-13 05:17:04] Threads: 4
[2025-10-13 05:17:04] Checking for CVMFS
[2025-10-13 05:17:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:17:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:17:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:17:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:17:05] 2.9.2.0 168809 5150 96856 151647 4 1 29748059 36864000 0 130560 0 4767633 99.992 179044 853 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 05:17:05] CVMFS is ok
[2025-10-13 05:17:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:17:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:17:05] Further information can be found at the LHC@home message board.
[2025-10-13 05:17:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:17:05] Checking for apptainer binary...
[2025-10-13 05:17:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:17:05] Running /usr/bin/apptainer --version
[2025-10-13 05:17:05] apptainer version 1.4.1-1.1
[2025-10-13 05:17:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:17:05] thA334
[2025-10-13 05:17:05] apptainer works
[2025-10-13 05:17:05] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:17:05] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:17:05] Starting ATLAS job with PandaID=6840223777
[2025-10-13 05:17:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:28:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:28:26] 2025-10-13 04:28:04,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:28:26] 2025-10-13 04:28:04,290 | INFO     | did not find any defunct processes belonging to 2012717
[2025-10-13 06:28:26] 2025-10-13 04:28:04,291 | INFO     | did not find any defunct processes belonging to 2012717
[2025-10-13 06:28:26] 2025-10-13 04:28:04,292 | INFO     | ready for new job
[2025-10-13 06:28:26] 2025-10-13 04:28:04,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:28:26] 2025-10-13 04:28:04,292 | INFO     | ***************************************
[2025-10-13 06:28:26] 2025-10-13 04:28:04,292 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:28:26] 2025-10-13 04:28:04,292 | INFO     | ***************************************
[2025-10-13 06:28:26] 2025-10-13 04:28:04,292 | INFO     | 
[2025-10-13 06:28:26] 2025-10-13 04:28:04,293 | INFO     | architecture information:
[2025-10-13 06:28:26] 2025-10-13 04:28:04,293 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:28:26] 2025-10-13 04:28:04,305 | INFO     | cat /etc/os-release:
[2025-10-13 06:28:26] NAME="CentOS Linux"
[2025-10-13 06:28:26] VERSION="7 (Core)"
[2025-10-13 06:28:26] ID="centos"
[2025-10-13 06:28:26] ID_LIKE="rhel fedora"
[2025-10-13 06:28:26] VERSION_ID="7"
[2025-10-13 06:28:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:28:26] ANSI_COLOR="0;31"
[2025-10-13 06:28:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:28:26] HOME_URL="https://www.centos.org/"
[2025-10-13 06:28:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:28:26] 
[2025-10-13 06:28:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:28:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:28:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:28:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:28:26] 
[2025-10-13 06:28:26] 2025-10-13 04:28:04,306 | INFO     | ***************************************
[2025-10-13 06:28:26] 2025-10-13 04:28:04,809 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 06:28:26] 2025-10-13 04:28:04,826 | INFO     | sufficient remaining disk space (229530140672 B)
[2025-10-13 06:28:26] 2025-10-13 04:28:04,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:28:26] 2025-10-13 04:28:04,826 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:28:26] 2025-10-13 04:28:04,826 | INFO     | update_server=False
[2025-10-13 06:28:26] 2025-10-13 04:28:04,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:28:26] 2025-10-13 04:28:04,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:28:26] 2025-10-13 04:28:04,827 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 06:28:26] 2025-10-13 04:28:04,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:28:26] 2025-10-13 04:28:04,827 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:28:26] 2025-10-13 04:28:04,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:28:26] 2025-10-13 04:28:04,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:28:26] 2025-10-13 04:28:05,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:28:26] 2025-10-13 04:28:05,016 | INFO     | aborting loop
[2025-10-13 06:28:26] 2025-10-13 04:28:05,271 | INFO     | all payload control threads have been joined
[2025-10-13 06:28:26] 2025-10-13 04:28:05,435 | INFO     | all data control threads have been joined
[2025-10-13 06:28:26] 2025-10-13 04:28:05,832 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:05,832 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:05,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:28:26] 2025-10-13 04:28:06,022 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:06,275 | INFO     | [payload] control thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:06,405 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:06,435 | INFO     | [job] validate thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:06,439 | INFO     | [data] control thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:06,444 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:06,460 | INFO     | all job control threads have been joined
[2025-10-13 06:28:26] 2025-10-13 04:28:06,488 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:06,596 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:06,899 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:07,238 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:07,466 | INFO     | [job] control thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:07,900 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:08,833 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:15,702 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:28:26] 2025-10-13 04:28:16,707 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:28:26] 2025-10-13 04:28:19,319 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:28:26] 2025-10-13 04:28:21,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139964105062208)>', '<ExcThread(monitor, started 139963303712512)>']
[2025-10-13 06:28:26] 2025-10-13 04:28:21,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:28:26] 2025-10-13 04:28:21,915 | INFO     | [monitor] control thread has ended
[2025-10-13 06:28:26] 2025-10-13 04:28:26,204 | INFO     | all workflow threads have been joined
[2025-10-13 06:28:26] 2025-10-13 04:28:26,205 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:28:26] 2025-10-13 04:28:26,205 | INFO     | traces error code: 0
[2025-10-13 06:28:26] 2025-10-13 04:28:26,205 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:28:26] 2025-10-13 04:28:26,272 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:28:26] 2025-10-13 04:28:26,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:28:26] 2025-10-13 04:28:26,279 [wrapper] pilotpid: 2006137
[2025-10-13 06:28:26] 2025-10-13 04:28:26,283 [wrapper] Pilot exit status: 0
[2025-10-13 06:28:26] 2025-10-13 04:28:26,295 [wrapper] pandaids: 6840223777
[2025-10-13 06:28:26] 2025-10-13 04:28:26,315 [wrapper] cleanup supervisor_pilot 2022629 2006138
[2025-10-13 06:28:26] 2025-10-13 04:28:26,319 [wrapper] Test setup, not cleaning
[2025-10-13 06:28:26] 2025-10-13 04:28:26,323 [wrapper] apfmon messages muted
[2025-10-13 06:28:26] 2025-10-13 04:28:26,326 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:28:26] 2025-10-13 04:28:26,330 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:28:26]  *** Error codes and diagnostics ***
[2025-10-13 06:28:26]     "exeErrorCode": 0,
[2025-10-13 06:28:26]     "exeErrorDiag": "",
[2025-10-13 06:28:26]     "pilotErrorCode": 0,
[2025-10-13 06:28:26]     "pilotErrorDiag": "",
[2025-10-13 06:28:26]  *** Listing of results directory ***
[2025-10-13 06:28:26] total 409120
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 06:28:26] -rwx------ 1 boinc boinc     36292 Oct 12 17:12 runpilot2-wrapper.sh
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc      5112 Oct 12 17:12 queuedata.json
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:28:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:17 run_atlas
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:17 job.xml
[2025-10-13 06:28:26] -rw-r--r-- 2 boinc boinc 219370603 Oct 13 05:17 EVNT.46676267._004557.pool.root.1
[2025-10-13 06:28:26] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:17 shared
[2025-10-13 06:28:26] -rw-r--r-- 2 boinc boinc    569679 Oct 13 05:17 input.tar.gz
[2025-10-13 06:28:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:17 start_atlas.sh
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:17 boinc_setup_complete
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc      6368 Oct 13 05:17 init_data.xml
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:17 boinc_lockfile
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:17 pandaJob.out
[2025-10-13 06:28:26] -rw------- 1 boinc boinc    974373 Oct 13 05:17 agis_schedconf.cvmfs.json
[2025-10-13 06:28:26] -rw------- 1 boinc boinc   1560580 Oct 13 05:17 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:28:26] drwx------ 5 boinc boinc      4096 Oct 13 05:17 pilot3
[2025-10-13 06:28:26] -rw------- 1 boinc boinc        95 Oct 13 06:27 pilot_heartbeat.json
[2025-10-13 06:28:26] -rw------- 1 boinc boinc 193885682 Oct 13 06:27 HITS.46676269._081881.pool.root.1
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc       530 Oct 13 06:27 boinc_task_state.xml
[2025-10-13 06:28:26] -rw------- 1 boinc boinc      1022 Oct 13 06:27 memory_monitor_summary.json
[2025-10-13 06:28:26] -rw------- 1 boinc boinc    265730 Oct 13 06:27 log.46676269._081881.job.log.tgz.1
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc      8192 Oct 13 06:28 boinc_mmap_file
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc        27 Oct 13 06:28 wrapper_checkpoint.txt
[2025-10-13 06:28:26] -rw------- 1 boinc boinc      7765 Oct 13 06:28 heartbeat.json
[2025-10-13 06:28:26] -rw------- 1 boinc boinc      4628 Oct 13 06:28 pilotlog.txt
[2025-10-13 06:28:26] -rw------- 1 boinc boinc    630968 Oct 13 06:28 log.46676269._081881.job.log.1
[2025-10-13 06:28:26] -rw------- 1 boinc boinc       357 Oct 13 06:28 output.list
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc       620 Oct 13 06:28 runtime_log
[2025-10-13 06:28:26] -rw------- 1 boinc boinc    911360 Oct 13 06:28 result.tar.gz
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc      8777 Oct 13 06:28 runtime_log.err
[2025-10-13 06:28:26] -rw------- 1 boinc boinc       658 Oct 13 06:28 bcMNDmPvCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvDUMDmqrxLym.diag
[2025-10-13 06:28:26] -rw-r--r-- 1 boinc boinc      9875 Oct 13 06:28 stderr.txt
[2025-10-13 06:28:26] HITS file was successfully produced:
[2025-10-13 06:28:26] -rw------- 1 boinc boinc 193885682 Oct 13 06:27 shared/HITS.pool.root.1
[2025-10-13 06:28:26]  *** Contents of shared directory: ***
[2025-10-13 06:28:26] total 405052
[2025-10-13 06:28:26] -rw-r--r-- 2 boinc boinc 219370603 Oct 13 05:17 ATLAS.root_0
[2025-10-13 06:28:26] -rw-r--r-- 2 boinc boinc    569679 Oct 13 05:17 input.tar.gz
[2025-10-13 06:28:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:17 start_atlas.sh
[2025-10-13 06:28:26] -rw------- 1 boinc boinc 193885682 Oct 13 06:27 HITS.pool.root.1
[2025-10-13 06:28:26] -rw------- 1 boinc boinc    911360 Oct 13 06:28 result.tar.gz
06:28:27 (2002345): run_atlas exited; CPU time 15877.995954
06:28:27 (2002345): called boinc_finish(0)

</stderr_txt>
]]>

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