Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:44:57 (5139): wrapper (7.7.26015): starting
14:44:57 (5139): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 14:44:57] Arguments: --nthreads 12
[2025-10-12 14:44:57] Threads: 12
[2025-10-12 14:44:57] Checking for CVMFS
[2025-10-12 14:44:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:44:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:44:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:44:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:44:58] 2.11.2.0 2984 223212 95368 151631 0 59 14785140 20275200 1 130560 1 110186107 99.984 13381000 12631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:44:58] CVMFS is ok
[2025-10-12 14:44:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:44:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:44:58] Further information can be found at the LHC@home message board.
[2025-10-12 14:44:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:44:58] Checking for apptainer binary...
[2025-10-12 14:44:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:44:58] Running /usr/bin/apptainer --version
[2025-10-12 14:44:58] apptainer version 1.3.2-1.el7
[2025-10-12 14:44:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:44:59] c-205-26.aglt2.org
[2025-10-12 14:44:59] apptainer works
[2025-10-12 14:44:59] Set ATHENA_PROC_NUMBER=12
[2025-10-12 14:44:59] Set ATHENA_CORE_NUMBER=12
[2025-10-12 14:44:59] Starting ATLAS job with PandaID=6840081095
[2025-10-12 14:44:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:55:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:55:27]  scope=mc23_13p6TeV
[2025-10-12 15:55:27]  status=None
[2025-10-12 15:55:27]  status_code=0
[2025-10-12 15:55:27]  storage_token=
[2025-10-12 15:55:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840081095/log.46676269._079463.job.log.tgz.1
[2025-10-12 15:55:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/d9/log.46676269._079463.job.log.tgz.1
[2025-10-12 15:55:27]  workdir=None
[2025-10-12 15:55:27] ]
[2025-10-12 15:55:27] 2025-10-12 19:54:37,436 | INFO     | transferring file log.46676269._079463.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840081095/log.46676269._079463.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 15:55:27] 2025-10-12 19:54:37,436 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840081095/log.46676269._079463.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._079463.job
[2025-10-12 15:55:27] 2025-10-12 19:54:37,459 | INFO     | adding to output.list: log.46676269._079463.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/d9/log.46676269._079463.job.log.tg
[2025-10-12 15:55:27] 2025-10-12 19:54:37,460 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:55:27] 2025-10-12 19:54:37,460 | INFO     | summary of transferred files:
[2025-10-12 15:55:27] 2025-10-12 19:54:37,461 | INFO     |  -- lfn=log.46676269._079463.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:55:27] 2025-10-12 19:54:37,461 | INFO     | stage-out finished correctly
[2025-10-12 15:55:27] 2025-10-12 19:54:37,516 | INFO     | monitor loop #310: job 0:6840081095 is in state 'finished'
[2025-10-12 15:55:27] 2025-10-12 19:54:37,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:55:27] 2025-10-12 19:54:37,597 | INFO     | time since job start (4163s) is within the limit (172800.0s)
[2025-10-12 15:55:27] 2025-10-12 19:54:39,326 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:55:27] 2025-10-12 19:54:39,603 | INFO     | time since job start (4165s) is within the limit (172800.0s)
[2025-10-12 15:55:27] 2025-10-12 19:54:40,025 | INFO     | monitor loop #311: job 0:6840081095 is in state 'finished'
[2025-10-12 15:55:27] 2025-10-12 19:54:40,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:55:27] 2025-10-12 19:54:40,229 | INFO     | job 6840081095 has state=finished
[2025-10-12 15:55:27] 2025-10-12 19:54:40,229 | INFO     | preparing for final server update for job 6840081095 in state='finished'
[2025-10-12 15:55:27] 2025-10-12 19:54:40,230 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:55:27] 2025-10-12 19:54:40,230 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:55:27] 2025-10-12 19:54:40,231 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:55:27] 2025-10-12 19:54:40,231 | INFO     | job 6840081095 has finished - writing final server update
[2025-10-12 15:55:27] 2025-10-12 19:54:40,231 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:55:27] 2025-10-12 19:54:40,232 | INFO     | executing command: lscpu
[2025-10-12 15:55:27] 2025-10-12 19:54:40,259 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:55:27] 2025-10-12 19:54:41,610 | INFO     | time since job start (4167s) is within the limit (172800.0s)
[2025-10-12 15:55:27] 2025-10-12 19:54:42,535 | INFO     | monitor loop #312: job 0:6840081095 is in state 'finished'
[2025-10-12 15:55:27] 2025-10-12 19:54:42,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:55:27] 2025-10-12 19:54:43,616 | INFO     | time since job start (4169s) is within the limit (172800.0s)
[2025-10-12 15:55:27] 2025-10-12 19:54:44,742 | INFO     | PID=8976 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 15:55:27] 2025-10-12 19:54:44,925 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 15:55:27] 2025-10-12 19:54:44,929 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 15:55:27] 2025-10-12 19:54:44,932 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840081095/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:55:27] 2025-10-12 19:54:44,933 | INFO     | extracted standard info from prmon json
[2025-10-12 15:55:27] 2025-10-12 19:54:44,933 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:55:27] 2025-10-12 19:54:44,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:55:27] 2025-10-12 19:54:44,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:55:27] 2025-10-12 19:54:44,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:55:27] 2025-10-12 19:54:44,936 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:55:27] 2025-10-12 19:54:44,936 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 15:55:27] 2025-10-12 19:54:44,937 | INFO     | sum of deviations: -5564654606.0
[2025-10-12 15:55:27] 2025-10-12 19:54:44,937 | INFO     | mean x: 1760296879.0
[2025-10-12 15:55:27] 2025-10-12 19:54:44,937 | INFO     | mean y: 2841709.0327868853
[2025-10-12 15:55:27] 2025-10-12 19:54:44,937 | INFO     | -- intersect: 139213643006.09705
[2025-10-12 15:55:27] 2025-10-12 19:54:44,937 | INFO     | intersect: 139213643006.09705
[2025-10-12 15:55:27] 2025-10-12 19:54:44,937 | INFO     | chi2: 0.09938860962483918
[2025-10-12 15:55:27] 2025-10-12 19:54:44,937 | INFO     | -- intersect: 139213643006.09705
[2025-10-12 15:55:27] 2025-10-12 19:54:44,937 | INFO     | current memory leak: -79.08 B/s (using 61 data points, chi2=0.10)
[2025-10-12 15:55:27] 2025-10-12 19:54:44,938 | INFO     | could have reported an average CPU frequency of 2048 MHz (6 samples)
[2025-10-12 15:55:27] 2025-10-12 19:54:44,938 | INFO     | ..............................
[2025-10-12 15:55:27] 2025-10-12 19:54:44,938 | INFO     | . Timing measurements:
[2025-10-12 15:55:27] 2025-10-12 19:54:44,938 | INFO     | . get job = 0 s
[2025-10-12 15:55:27] 2025-10-12 19:54:44,938 | INFO     | . initial setup = 2 s
[2025-10-12 15:55:27] 2025-10-12 19:54:44,938 | INFO     | . payload setup = 7 s
[2025-10-12 15:55:27] 2025-10-12 19:54:44,938 | INFO     | . stage-in = 0 s
[2025-10-12 15:55:27] 2025-10-12 19:54:44,939 | INFO     | . payload execution = 4133 s
[2025-10-12 15:55:27] 2025-10-12 19:54:44,939 | INFO     | . stage-out = 0 s
[2025-10-12 15:55:27] 2025-10-12 19:54:44,939 | INFO     | . log creation = 0 s
[2025-10-12 15:55:27] 2025-10-12 19:54:44,939 | INFO     | ..............................
[2025-10-12 15:55:27] 2025-10-12 19:54:45,025 | INFO     | 
[2025-10-12 15:55:27] 2025-10-12 19:54:45,026 | INFO     | job summary report
[2025-10-12 15:55:27] 2025-10-12 19:54:45,028 | INFO     | --------------------------------------------------
[2025-10-12 15:55:27] 2025-10-12 19:54:45,029 | INFO     | PanDA job id: 6840081095
[2025-10-12 15:55:27] 2025-10-12 19:54:45,029 | INFO     | task id: 46676269
[2025-10-12 15:55:27] 2025-10-12 19:54:45,029 | INFO     | errors: (none)
[2025-10-12 15:55:27] 2025-10-12 19:54:45,029 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:55:27] 2025-10-12 19:54:45,029 | INFO     | pilot state: finished 
[2025-10-12 15:55:27] 2025-10-12 19:54:45,029 | INFO     | transexitcode: 0
[2025-10-12 15:55:27] 2025-10-12 19:54:45,030 | INFO     | exeerrorcode: 0
[2025-10-12 15:55:27] 2025-10-12 19:54:45,030 | INFO     | exeerrordiag: 
[2025-10-12 15:55:27] 2025-10-12 19:54:45,030 | INFO     | exitcode: 0
[2025-10-12 15:55:27] 2025-10-12 19:54:45,030 | INFO     | exitmsg: OK
[2025-10-12 15:55:27] 2025-10-12 19:54:45,030 | INFO     | cpuconsumptiontime: 44626 s
[2025-10-12 15:55:27] 2025-10-12 19:54:45,030 | INFO     | nevents: 400
[2025-10-12 15:55:27] 2025-10-12 19:54:45,031 | INFO     | neventsw: 0
[2025-10-12 15:55:27] 2025-10-12 19:54:45,031 | INFO     | pid: 16228
[2025-10-12 15:55:27] 2025-10-12 19:54:45,031 | INFO     | pgrp: 16228
[2025-10-12 15:55:27] 2025-10-12 19:54:45,031 | INFO     | corecount: 12
[2025-10-12 15:55:27] 2025-10-12 19:54:45,031 | INFO     | event service: False
[2025-10-12 15:55:27] 2025-10-12 19:54:45,031 | INFO     | sizes: {0: 2348857, 1: 2348885, 5: 2349147, 11: 2349203, 4144: 2375072, 4147: 2384070, 4149: 2384254, 4154: 2384448}
[2025-10-12 15:55:27] 2025-10-12 19:54:45,032 | INFO     | --------------------------------------------------
[2025-10-12 15:55:27] 2025-10-12 19:54:45,032 | INFO     | 
[2025-10-12 15:55:27] 2025-10-12 19:54:45,032 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:55:27] 2025-10-12 19:54:45,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,058 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,058 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,058 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,058 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,058 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,058 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:55:27] 2025-10-12 19:54:45,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:55:27] 2025-10-12 19:54:45,061 | INFO     | job 6840081095 has completed (purged errors)
[2025-10-12 15:55:27] 2025-10-12 19:54:45,061 | INFO     | overall cleanup function is called
[2025-10-12 15:55:27] 2025-10-12 19:54:46,069 | INFO     | --- collectZombieJob: --- 10, [16228]
[2025-10-12 15:55:27] 2025-10-12 19:54:46,069 | INFO     | zombie collector waiting for pid 16228
[2025-10-12 15:55:27] 2025-10-12 19:54:46,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:55:27] 2025-10-12 19:54:46,070 | INFO     | collected zombie processes
[2025-10-12 15:55:27] 2025-10-12 19:54:46,070 | INFO     | will attempt to kill all subprocesses of pid=16228
[2025-10-12 15:55:27] 2025-10-12 19:54:46,160 | INFO     | process IDs to be killed: [16228] (in reverse order)
[2025-10-12 15:55:27] 2025-10-12 19:54:46,212 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:55:27] 2025-10-12 19:54:46,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:55:27] 2025-10-12 19:54:46,216 | INFO     | did not find any defunct processes belonging to 16228
[2025-10-12 15:55:27] 2025-10-12 19:54:46,219 | INFO     | did not find any defunct processes belonging to 16228
[2025-10-12 15:55:27] 2025-10-12 19:54:46,219 | INFO     | ready for new job
[2025-10-12 15:55:27] 2025-10-12 19:54:46,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:55:27] 2025-10-12 19:54:46,221 | INFO     | ***************************************
[2025-10-12 15:55:27] 2025-10-12 19:54:46,222 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:55:27] 2025-10-12 19:54:46,222 | INFO     | ***************************************
[2025-10-12 15:55:27] 2025-10-12 19:54:46,222 | INFO     | 
[2025-10-12 15:55:27] 2025-10-12 19:54:46,223 | INFO     | architecture information:
[2025-10-12 15:55:27] 2025-10-12 19:54:46,223 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:55:27] 2025-10-12 19:54:46,238 | INFO     | cat /etc/os-release:
[2025-10-12 15:55:27] NAME="CentOS Linux"
[2025-10-12 15:55:27] VERSION="7 (Core)"
[2025-10-12 15:55:27] ID="centos"
[2025-10-12 15:55:27] ID_LIKE="rhel fedora"
[2025-10-12 15:55:27] VERSION_ID="7"
[2025-10-12 15:55:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:55:27] ANSI_COLOR="0;31"
[2025-10-12 15:55:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:55:27] HOME_URL="https://www.centos.org/"
[2025-10-12 15:55:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:55:27] 
[2025-10-12 15:55:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:55:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:55:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:55:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:55:27] 
[2025-10-12 15:55:27] 2025-10-12 19:54:46,238 | INFO     | ***************************************
[2025-10-12 15:55:27] 2025-10-12 19:54:46,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:55:27] 2025-10-12 19:54:46,759 | INFO     | sufficient remaining disk space (29370613760 B)
[2025-10-12 15:55:27] 2025-10-12 19:54:46,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:55:27] 2025-10-12 19:54:46,760 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:55:27] 2025-10-12 19:54:46,760 | INFO     | update_server=False
[2025-10-12 15:55:27] 2025-10-12 19:54:46,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:55:27] 2025-10-12 19:54:46,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:55:27] 2025-10-12 19:54:46,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:55:27] 2025-10-12 19:54:46,761 | INFO     | aborting loop
[2025-10-12 15:55:27] 2025-10-12 19:54:46,781 | INFO     | all job control threads have been joined
[2025-10-12 15:55:27] 2025-10-12 19:54:46,817 | INFO     | all payload control threads have been joined
[2025-10-12 15:55:27] 2025-10-12 19:54:46,889 | INFO     | all data control threads have been joined
[2025-10-12 15:55:27] 2025-10-12 19:54:47,764 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:47,766 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:47,766 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:47,786 | INFO     | [job] control thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:47,823 | INFO     | [payload] control thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:47,894 | INFO     | [data] control thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:47,947 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:48,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:55:27] 2025-10-12 19:54:48,134 | INFO     | [job] validate thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:48,236 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:48,253 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:48,533 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:49,090 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:49,141 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:49,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:55:27] 2025-10-12 19:54:50,063 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:53,925 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:54:57,675 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:55:27] 2025-10-12 19:54:58,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:55:27] 2025-10-12 19:55:16,940 | INFO     | PID=8976 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 15:55:27] 2025-10-12 19:55:16,941 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:55:27] 2025-10-12 19:55:16,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:55:27] 2025-10-12 19:55:16,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:55:27] 2025-10-12 19:55:20,712 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:55:27] 2025-10-12 19:55:22,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019626526528)>', '<ExcThread(monitor, started 140019197003520)>']
[2025-10-12 15:55:27] 2025-10-12 19:55:22,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:55:27] 2025-10-12 19:55:22,971 | INFO     | [monitor] control thread has ended
[2025-10-12 15:55:27] 2025-10-12 19:55:27,163 | INFO     | all workflow threads have been joined
[2025-10-12 15:55:27] 2025-10-12 19:55:27,174 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:55:27] 2025-10-12 19:55:27,176 | INFO     | traces error code: 0
[2025-10-12 15:55:27] 2025-10-12 19:55:27,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:55:27] 2025-10-12 19:55:27,276 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:55:27] 2025-10-12 19:55:27,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:55:27] 2025-10-12 19:55:27,284 [wrapper] pilotpid: 8976
[2025-10-12 15:55:27] 2025-10-12 19:55:27,288 [wrapper] Pilot exit status: 0
[2025-10-12 15:55:27] 2025-10-12 19:55:27,303 [wrapper] pandaids: 6840081095
[2025-10-12 15:55:27] 2025-10-12 19:55:27,344 [wrapper] cleanup supervisor_pilot 20251 8977
[2025-10-12 15:55:27] 2025-10-12 19:55:27,348 [wrapper] Test setup, not cleaning
[2025-10-12 15:55:27] 2025-10-12 19:55:27,352 [wrapper] apfmon messages muted
[2025-10-12 15:55:27] 2025-10-12 19:55:27,356 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:55:27] 2025-10-12 19:55:27,360 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:55:27]  *** Error codes and diagnostics ***
[2025-10-12 15:55:27]     "exeErrorCode": 0,
[2025-10-12 15:55:27]     "exeErrorDiag": "",
[2025-10-12 15:55:27]     "pilotErrorCode": 0,
[2025-10-12 15:55:27]     "pilotErrorDiag": "",
[2025-10-12 15:55:27]  *** Listing of results directory ***
[2025-10-12 15:55:27] total 405976
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:22 pilot3.tar.gz
[2025-10-12 15:55:27] -rwx------ 1 boincer umatlas     36292 Oct 12 09:28 runpilot2-wrapper.sh
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:28 queuedata.json
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:55:27] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:44 run_atlas
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:44 job.xml
[2025-10-12 15:55:27] -rw-r--r-- 2 boincer umatlas 220100232 Oct 12 14:44 EVNT.46676267._003865.pool.root.1
[2025-10-12 15:55:27] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:44 start_atlas.sh
[2025-10-12 15:55:27] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:44 shared
[2025-10-12 15:55:27] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 14:44 input.tar.gz
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:44 boinc_lockfile
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 14:44 pandaJob.out
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas    975528 Oct 12 14:45 agis_schedconf.cvmfs.json
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas   1560580 Oct 12 14:45 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:55:27] drwx------ 5 boincer umatlas      4096 Oct 12 14:45 pilot3
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 15:46 init_data.xml
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas 189706422 Oct 12 15:54 HITS.46676269._079463.pool.root.1
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas      1050 Oct 12 15:54 memory_monitor_summary.json
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas       529 Oct 12 15:54 boinc_task_state.xml
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas    393540 Oct 12 15:54 log.46676269._079463.job.log.tgz.1
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas      7860 Oct 12 15:54 heartbeat.json
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:55 boinc_mmap_file
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas        27 Oct 12 15:55 wrapper_checkpoint.txt
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas        95 Oct 12 15:55 pilot_heartbeat.json
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas      4817 Oct 12 15:55 pilotlog.txt
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas    608658 Oct 12 15:55 log.46676269._079463.job.log.1
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas       357 Oct 12 15:55 output.list
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:55 runtime_log
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas   1024000 Oct 12 15:55 result.tar.gz
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 15:55 runtime_log.err
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas       659 Oct 12 15:55 JbzNDmkIBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd0jNDmqY4Ucn.diag
[2025-10-12 15:55:27] -rw-r--r-- 1 boincer umatlas     22011 Oct 12 15:55 stderr.txt
[2025-10-12 15:55:27] HITS file was successfully produced:
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas 189706422 Oct 12 15:54 shared/HITS.pool.root.1
[2025-10-12 15:55:27]  *** Contents of shared directory: ***
[2025-10-12 15:55:27] total 401788
[2025-10-12 15:55:27] -rw-r--r-- 2 boincer umatlas 220100232 Oct 12 14:44 ATLAS.root_0
[2025-10-12 15:55:27] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:44 start_atlas.sh
[2025-10-12 15:55:27] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 14:44 input.tar.gz
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas 189706422 Oct 12 15:54 HITS.pool.root.1
[2025-10-12 15:55:27] -rw------- 1 boincer umatlas   1024000 Oct 12 15:55 result.tar.gz
15:55:29 (5139): run_atlas exited; CPU time 44603.181001
15:55:29 (5139): called boinc_finish(0)

</stderr_txt>
]]>

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