Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:41:06 (37458): wrapper (7.7.26015): starting
15:41:06 (37458): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:41:06] Arguments: --nthreads 8
[2025-10-12 15:41:06] Threads: 8
[2025-10-12 15:41:06] Checking for CVMFS
[2025-10-12 15:41:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:41:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:41:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:41:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:41:08] 2.13.1.0 7481 77771 97752 151635 2 322 34405391 40960001 29328 16776704 0 448195722 99.779 253552665 45793 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:41:08] CVMFS is ok
[2025-10-12 15:41:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:41:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:41:08] Further information can be found at the LHC@home message board.
[2025-10-12 15:41:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:41:08] Checking for apptainer binary...
[2025-10-12 15:41:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:41:08] Running /usr/bin/apptainer --version
[2025-10-12 15:41:09] apptainer version 1.4.3-1.el9
[2025-10-12 15:41:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:41:10] c-208-38.aglt2.org
[2025-10-12 15:41:10] apptainer works
[2025-10-12 15:41:10] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:41:10] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:41:10] Starting ATLAS job with PandaID=6840428914
[2025-10-12 15:41:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:28:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:28:12] 2025-10-12 22:27:20,031 | INFO     | time since job start (9933s) is within the limit (172800.0s)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,400 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 18:28:12] 2025-10-12 22:27:21,426 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3731.421867187497
[2025-10-12 18:28:12] 2025-10-12 22:27:21,495 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840428914/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,495 | INFO     | extracted standard info from prmon json
[2025-10-12 18:28:12] 2025-10-12 22:27:21,495 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:28:12] 2025-10-12 22:27:21,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:28:12] 2025-10-12 22:27:21,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:28:12] 2025-10-12 22:27:21,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:28:12] 2025-10-12 22:27:21,497 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:28:12] 2025-10-12 22:27:21,514 | INFO     | sum of square deviations: 1318271946.493832
[2025-10-12 18:28:12] 2025-10-12 22:27:21,514 | INFO     | sum of deviations: 39827484141.555565
[2025-10-12 18:28:12] 2025-10-12 22:27:21,514 | INFO     | mean x: 1760303075.506173
[2025-10-12 18:28:12] 2025-10-12 22:27:21,514 | INFO     | mean y: 2395365.9444444445
[2025-10-12 18:28:12] 2025-10-12 22:27:21,515 | INFO     | -- intersect: -53179683650.84636
[2025-10-12 18:28:12] 2025-10-12 22:27:21,515 | INFO     | intersect: -53179683650.84636
[2025-10-12 18:28:12] 2025-10-12 22:27:21,515 | INFO     | chi2: 3.596374606564854
[2025-10-12 18:28:12] 2025-10-12 22:27:21,515 | INFO     | sum of square deviations: 1199935148.9936268
[2025-10-12 18:28:12] 2025-10-12 22:27:21,515 | INFO     | sum of deviations: 51391896317.47767
[2025-10-12 18:28:12] 2025-10-12 22:27:21,515 | INFO     | mean x: 1760302923.0063694
[2025-10-12 18:28:12] 2025-10-12 22:27:21,516 | INFO     | mean y: 2409885.5222929935
[2025-10-12 18:28:12] 2025-10-12 22:27:21,516 | INFO     | -- intersect: -75389418899.86542
[2025-10-12 18:28:12] 2025-10-12 22:27:21,516 | INFO     | intersect: -75389418899.86542
[2025-10-12 18:28:12] 2025-10-12 22:27:21,516 | INFO     | chi2: 2.7797799418291
[2025-10-12 18:28:12] 2025-10-12 22:27:21,516 | INFO     | current chi2=2.7797799418291 (change=22.70605134529464 %)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,516 | INFO     | right removable region: 156
[2025-10-12 18:28:12] 2025-10-12 22:27:21,516 | INFO     | sum of square deviations: 1199934538.9936268
[2025-10-12 18:28:12] 2025-10-12 22:27:21,516 | INFO     | sum of deviations: 791754802.3757954
[2025-10-12 18:28:12] 2025-10-12 22:27:21,516 | INFO     | mean x: 1760303228.0063694
[2025-10-12 18:28:12] 2025-10-12 22:27:21,517 | INFO     | mean y: 2445365.6242038216
[2025-10-12 18:28:12] 2025-10-12 22:27:21,517 | INFO     | -- intersect: -1159058440.725569
[2025-10-12 18:28:12] 2025-10-12 22:27:21,517 | INFO     | intersect: -1159058440.725569
[2025-10-12 18:28:12] 2025-10-12 22:27:21,517 | INFO     | chi2: 1.0351405952731194
[2025-10-12 18:28:12] 2025-10-12 22:27:21,517 | INFO     | current chi2=1.0351405952731194 (change=71.217108657603 %)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,517 | INFO     | sum of square deviations: 1088899593.99342
[2025-10-12 18:28:12] 2025-10-12 22:27:21,533 | INFO     | sum of deviations: -7614187624.855264
[2025-10-12 18:28:12] 2025-10-12 22:27:21,534 | INFO     | mean x: 1760303380.506579
[2025-10-12 18:28:12] 2025-10-12 22:27:21,534 | INFO     | mean y: 2456825.8552631577
[2025-10-12 18:28:12] 2025-10-12 22:27:21,534 | INFO     | -- intersect: 12311470705.352654
[2025-10-12 18:28:12] 2025-10-12 22:27:21,534 | INFO     | intersect: 12311470705.352654
[2025-10-12 18:28:12] 2025-10-12 22:27:21,534 | INFO     | chi2: 0.9106284418073899
[2025-10-12 18:28:12] 2025-10-12 22:27:21,534 | INFO     | current chi2=0.9106284418073899 (change=12.028525790052441 %)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,534 | INFO     | left removable region: 20
[2025-10-12 18:28:12] 2025-10-12 22:27:21,534 | INFO     | sum of square deviations: 779952161.9926479
[2025-10-12 18:28:12] 2025-10-12 22:27:21,535 | INFO     | sum of deviations: -532920560.1249981
[2025-10-12 18:28:12] 2025-10-12 22:27:21,535 | INFO     | mean x: 1760303502.5073528
[2025-10-12 18:28:12] 2025-10-12 22:27:21,535 | INFO     | mean y: 2482517.625
[2025-10-12 18:28:12] 2025-10-12 22:27:21,535 | INFO     | -- intersect: 1205251064.5439806
[2025-10-12 18:28:12] 2025-10-12 22:27:21,535 | INFO     | intersect: 1205251064.5439806
[2025-10-12 18:28:12] 2025-10-12 22:27:21,535 | INFO     | chi2: 0.011216686018339493
[2025-10-12 18:28:12] 2025-10-12 22:27:21,535 | INFO     | -- intersect: 1205251064.5439806
[2025-10-12 18:28:12] 2025-10-12 22:27:21,535 | INFO     | current memory leak: -0.68 B/s (using 136 data points, chi2=0.01)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,535 | INFO     | could have reported an average CPU frequency of 3751 MHz (9 samples)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | ..............................
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | . Timing measurements:
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | . get job = 0 s
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | . initial setup = 3 s
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | . payload setup = 14 s
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | . stage-in = 0 s
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | . payload execution = 9837 s
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | . stage-out = 3 s
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | . log creation = 0 s
[2025-10-12 18:28:12] 2025-10-12 22:27:21,536 | INFO     | ..............................
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | 
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | job summary report
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | --------------------------------------------------
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | PanDA job id: 6840428914
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | task id: 46676269
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | errors: (none)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | pilot state: finished 
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | transexitcode: 0
[2025-10-12 18:28:12] 2025-10-12 22:27:21,684 | INFO     | exeerrorcode: 0
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | exeerrordiag: 
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | exitcode: 0
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | exitmsg: OK
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | cpuconsumptiontime: 22904 s
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | nevents: 400
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | neventsw: 0
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | pid: 60969
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | pgrp: 60969
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | corecount: 8
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | event service: False
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | sizes: {0: 2348804, 1: 2348804, 11: 2348832, 13: 2349122, 22: 2349178, 9857: 2378038, 9862: 2387036, 9865: 2387092, 9900: 2387350}
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | --------------------------------------------------
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | 
[2025-10-12 18:28:12] 2025-10-12 22:27:21,685 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:28:12] 2025-10-12 22:27:21,790 | INFO     | job 6840428914 has completed (purged errors)
[2025-10-12 18:28:12] 2025-10-12 22:27:21,790 | INFO     | overall cleanup function is called
[2025-10-12 18:28:12] 2025-10-12 22:27:22,797 | INFO     | --- collectZombieJob: --- 10, [60969]
[2025-10-12 18:28:12] 2025-10-12 22:27:22,797 | INFO     | zombie collector waiting for pid 60969
[2025-10-12 18:28:12] 2025-10-12 22:27:22,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:28:12] 2025-10-12 22:27:22,798 | INFO     | collected zombie processes
[2025-10-12 18:28:12] 2025-10-12 22:27:22,798 | INFO     | will attempt to kill all subprocesses of pid=60969
[2025-10-12 18:28:12] 2025-10-12 22:27:24,626 | INFO     | process IDs to be killed: [60969] (in reverse order)
[2025-10-12 18:28:12] 2025-10-12 22:27:25,209 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:28:12] 2025-10-12 22:27:25,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:28:12] 2025-10-12 22:27:25,380 | INFO     | did not find any defunct processes belonging to 60969
[2025-10-12 18:28:12] 2025-10-12 22:27:25,481 | INFO     | did not find any defunct processes belonging to 60969
[2025-10-12 18:28:12] 2025-10-12 22:27:25,481 | INFO     | ready for new job
[2025-10-12 18:28:12] 2025-10-12 22:27:25,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:28:12] 2025-10-12 22:27:25,483 | INFO     | ***************************************
[2025-10-12 18:28:12] 2025-10-12 22:27:25,483 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:28:12] 2025-10-12 22:27:25,483 | INFO     | ***************************************
[2025-10-12 18:28:12] 2025-10-12 22:27:25,483 | INFO     | 
[2025-10-12 18:28:12] 2025-10-12 22:27:25,504 | INFO     | architecture information:
[2025-10-12 18:28:12] 2025-10-12 22:27:25,527 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:28:12] 2025-10-12 22:27:25,617 | INFO     | cat /etc/os-release:
[2025-10-12 18:28:12] NAME="CentOS Linux"
[2025-10-12 18:28:12] VERSION="7 (Core)"
[2025-10-12 18:28:12] ID="centos"
[2025-10-12 18:28:12] ID_LIKE="rhel fedora"
[2025-10-12 18:28:12] VERSION_ID="7"
[2025-10-12 18:28:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:28:12] ANSI_COLOR="0;31"
[2025-10-12 18:28:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:28:12] HOME_URL="https://www.centos.org/"
[2025-10-12 18:28:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:28:12] 
[2025-10-12 18:28:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:28:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:28:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:28:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:28:12] 
[2025-10-12 18:28:12] 2025-10-12 22:27:25,617 | INFO     | ***************************************
[2025-10-12 18:28:12] 2025-10-12 22:27:26,135 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 18:28:12] 2025-10-12 22:27:26,226 | INFO     | sufficient remaining disk space (170274062336 B)
[2025-10-12 18:28:12] 2025-10-12 22:27:26,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:28:12] 2025-10-12 22:27:26,227 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:28:12] 2025-10-12 22:27:26,227 | INFO     | update_server=False
[2025-10-12 18:28:12] 2025-10-12 22:27:26,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:28:12] 2025-10-12 22:27:26,280 | INFO     | all data control threads have been joined
[2025-10-12 18:28:12] 2025-10-12 22:27:26,609 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 18:28:12] 2025-10-12 22:27:26,610 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 18:28:12] 2025-10-12 22:27:26,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:28:12] 2025-10-12 22:27:26,610 | INFO     | will abort loop
[2025-10-12 18:28:12] 2025-10-12 22:27:26,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:28:12] 2025-10-12 22:27:27,003 | INFO     | all payload control threads have been joined
[2025-10-12 18:28:12] 2025-10-12 22:27:27,217 | INFO     | all job control threads have been joined
[2025-10-12 18:28:12] 2025-10-12 22:27:27,232 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:27,286 | INFO     | [data] control thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:27,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:28:12] 2025-10-12 22:27:27,450 | INFO     | [job] validate thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:27,635 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:27,703 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:27,704 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:28,009 | INFO     | [payload] control thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:28,042 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:28,223 | INFO     | [job] control thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:28,228 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:28,229 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:28,325 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:28,333 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:28,628 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:28,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:28:12] 2025-10-12 22:27:29,433 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:33,003 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:28:12] 2025-10-12 22:27:55,132 | INFO     | PID=46488 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:28:12] 2025-10-12 22:27:55,132 | INFO     | .. there are 23 such processes running
[2025-10-12 18:28:12] 2025-10-12 22:27:55,152 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:28:12] 2025-10-12 22:27:55,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:28:12] 2025-10-12 22:27:55,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:28:12] 2025-10-12 22:28:04,186 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:28:12] 2025-10-12 22:28:04,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479576299328)>', '<ExcThread(monitor, started 140479203088128)>']
[2025-10-12 18:28:12] 2025-10-12 22:28:05,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:28:12] 2025-10-12 22:28:05,216 | INFO     | [monitor] control thread has ended
[2025-10-12 18:28:12] 2025-10-12 22:28:09,736 | INFO     | all workflow threads have been joined
[2025-10-12 18:28:12] 2025-10-12 22:28:09,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:28:12] 2025-10-12 22:28:09,737 | INFO     | traces error code: 0
[2025-10-12 18:28:12] 2025-10-12 22:28:09,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:28:12] 2025-10-12 22:28:10,908 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:28:12] 2025-10-12 22:28:10,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:28:12] 2025-10-12 22:28:10,974 [wrapper] pilotpid: 46488
[2025-10-12 18:28:12] 2025-10-12 22:28:11,001 [wrapper] Pilot exit status: 0
[2025-10-12 18:28:12] 2025-10-12 22:28:11,236 [wrapper] pandaids: 6840428914
[2025-10-12 18:28:12] 2025-10-12 22:28:11,711 [wrapper] cleanup supervisor_pilot  652090 46489
[2025-10-12 18:28:12] 2025-10-12 22:28:11,723 [wrapper] Test setup, not cleaning
[2025-10-12 18:28:12] 2025-10-12 22:28:11,745 [wrapper] apfmon messages muted
[2025-10-12 18:28:12] 2025-10-12 22:28:11,763 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:28:12] 2025-10-12 22:28:11,794 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:28:12]  *** Error codes and diagnostics ***
[2025-10-12 18:28:12]     "exeErrorCode": 0,
[2025-10-12 18:28:12]     "exeErrorDiag": "",
[2025-10-12 18:28:12]     "pilotErrorCode": 0,
[2025-10-12 18:28:12]     "pilotErrorDiag": "",
[2025-10-12 18:28:12]  *** Listing of results directory ***
[2025-10-12 18:28:12] total 404928
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:13 queuedata.json
[2025-10-12 18:28:12] -rwx------. 1 boincer umatlas     36292 Oct 12 13:14 runpilot2-wrapper.sh
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:28:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:41 run_atlas
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:41 job.xml
[2025-10-12 18:28:12] -rw-r--r--. 2 boincer umatlas 222140177 Oct 12 15:41 EVNT.46676267._004805.pool.root.1
[2025-10-12 18:28:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:41 shared
[2025-10-12 18:28:12] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 15:41 input.tar.gz
[2025-10-12 18:28:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:41 start_atlas.sh
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:41 boinc_lockfile
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 15:41 pandaJob.out
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas    975536 Oct 12 15:41 agis_schedconf.cvmfs.json
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:28:12] drwx------. 5 boincer umatlas      4096 Oct 12 15:41 pilot3
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 18:19 init_data.xml
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas 185138884 Oct 12 18:25 HITS.46676269._084498.pool.root.1
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas       529 Oct 12 18:25 boinc_task_state.xml
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas      1061 Oct 12 18:26 memory_monitor_summary.json
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas    390791 Oct 12 18:26 log.46676269._084498.job.log.tgz.1
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas      7821 Oct 12 18:27 heartbeat.json
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas        95 Oct 12 18:27 pilot_heartbeat.json
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas      5009 Oct 12 18:28 pilotlog.txt
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:28 boinc_mmap_file
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas        27 Oct 12 18:28 wrapper_checkpoint.txt
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas   1336508 Oct 12 18:28 log.46676269._084498.job.log.1
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas       357 Oct 12 18:28 output.list
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:28 runtime_log
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas   1751040 Oct 12 18:28 result.tar.gz
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 18:28 runtime_log.err
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas       659 Oct 12 18:28 jF2NDmOpES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiokNDmNGlK3m.diag
[2025-10-12 18:28:12] -rw-r--r--. 1 boincer umatlas     21152 Oct 12 18:28 stderr.txt
[2025-10-12 18:28:12] HITS file was successfully produced:
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas 185138884 Oct 12 18:25 shared/HITS.pool.root.1
[2025-10-12 18:28:12]  *** Contents of shared directory: ***
[2025-10-12 18:28:12] total 400032
[2025-10-12 18:28:12] -rw-r--r--. 2 boincer umatlas 222140177 Oct 12 15:41 ATLAS.root_0
[2025-10-12 18:28:12] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 15:41 input.tar.gz
[2025-10-12 18:28:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:41 start_atlas.sh
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas 185138884 Oct 12 18:25 HITS.pool.root.1
[2025-10-12 18:28:12] -rw-------. 1 boincer umatlas   1751040 Oct 12 18:28 result.tar.gz
18:28:14 (37458): run_atlas exited; CPU time 23138.908766
18:28:14 (37458): called boinc_finish(0)

</stderr_txt>
]]>

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