Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:33:50 (4051679): wrapper (7.7.26015): starting
14:33:50 (4051679): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:33:50] Arguments: --nthreads 8
[2025-10-12 14:33:50] Threads: 8
[2025-10-12 14:33:50] Checking for CVMFS
[2025-10-12 14:33:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:33:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:33:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:33:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:33:51] 2.13.1.0 7481 77704 105828 151631 1 517 34346239 40960000 29523 16776704 0 447962841 99.779 253549806 45793 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:33:51] CVMFS is ok
[2025-10-12 14:33:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:33:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:33:51] Further information can be found at the LHC@home message board.
[2025-10-12 14:33:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:33:51] Checking for apptainer binary...
[2025-10-12 14:33:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:33:51] Running /usr/bin/apptainer --version
[2025-10-12 14:33:51] apptainer version 1.4.3-1.el9
[2025-10-12 14:33:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:33:52] c-208-38.aglt2.org
[2025-10-12 14:33:52] apptainer works
[2025-10-12 14:33:52] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:33:52] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:33:52] Starting ATLAS job with PandaID=6840428786
[2025-10-12 14:33:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:44:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:44:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/c2/log.46676269._084370.job.log.tgz.1
[2025-10-12 15:44:37]  workdir=None
[2025-10-12 15:44:37] ]
[2025-10-12 15:44:37] 2025-10-12 19:43:48,987 | INFO     | transferring file log.46676269._084370.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6840428786/log.46676269._084370.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 15:44:37] 2025-10-12 19:43:48,987 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6840428786/log.46676269._084370.job.log.tgz.1 /tmp/boinchome/slots/6/log.46676269._084370.job
[2025-10-12 15:44:37] 2025-10-12 19:43:49,036 | INFO     | adding to output.list: log.46676269._084370.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/c2/log.46676269._084370.job.log.tg
[2025-10-12 15:44:37] 2025-10-12 19:43:49,036 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:44:37] 2025-10-12 19:43:49,036 | INFO     | summary of transferred files:
[2025-10-12 15:44:37] 2025-10-12 19:43:49,037 | INFO     |  -- lfn=log.46676269._084370.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:44:37] 2025-10-12 19:43:49,037 | INFO     | stage-out finished correctly
[2025-10-12 15:44:37] 2025-10-12 19:43:49,145 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:44:37] 2025-10-12 19:43:49,258 | INFO     | time since job start (4165s) is within the limit (172800.0s)
[2025-10-12 15:44:37] 2025-10-12 19:43:50,171 | INFO     | job 6840428786 has state=finished
[2025-10-12 15:44:37] 2025-10-12 19:43:50,172 | INFO     | preparing for final server update for job 6840428786 in state='finished'
[2025-10-12 15:44:37] 2025-10-12 19:43:50,286 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 15:44:37] 2025-10-12 19:43:50,286 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:44:37] 2025-10-12 19:43:50,286 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:44:37] 2025-10-12 19:43:50,308 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:44:37] 2025-10-12 19:43:50,308 | INFO     | job 6840428786 has finished - writing final server update
[2025-10-12 15:44:37] 2025-10-12 19:43:50,308 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:44:37] 2025-10-12 19:43:50,309 | INFO     | executing command: lscpu
[2025-10-12 15:44:37] 2025-10-12 19:43:50,426 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:44:37] 2025-10-12 19:43:51,185 | INFO     | monitor loop #292: job 0:6840428786 is in state 'finished'
[2025-10-12 15:44:37] 2025-10-12 19:43:51,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:44:37] 2025-10-12 19:43:51,265 | INFO     | time since job start (4167s) is within the limit (172800.0s)
[2025-10-12 15:44:37] 2025-10-12 19:43:53,271 | INFO     | time since job start (4169s) is within the limit (172800.0s)
[2025-10-12 15:44:37] 2025-10-12 19:43:53,690 | INFO     | monitor loop #293: job 0:6840428786 is in state 'finished'
[2025-10-12 15:44:37] 2025-10-12 19:43:53,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:44:37] 2025-10-12 19:43:55,279 | INFO     | time since job start (4171s) is within the limit (172800.0s)
[2025-10-12 15:44:37] 2025-10-12 19:43:56,195 | INFO     | monitor loop #294: job 0:6840428786 is in state 'finished'
[2025-10-12 15:44:37] 2025-10-12 19:43:56,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:44:37] 2025-10-12 19:43:57,286 | INFO     | time since job start (4173s) is within the limit (172800.0s)
[2025-10-12 15:44:37] 2025-10-12 19:43:58,699 | INFO     | monitor loop #295: job 0:6840428786 is in state 'finished'
[2025-10-12 15:44:37] 2025-10-12 19:43:58,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:44:37] 2025-10-12 19:43:59,293 | INFO     | time since job start (4175s) is within the limit (172800.0s)
[2025-10-12 15:44:37] 2025-10-12 19:43:59,405 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 15:44:37] 2025-10-12 19:43:59,410 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3756.5689843749997
[2025-10-12 15:44:37] 2025-10-12 19:43:59,424 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6840428786/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:44:37] 2025-10-12 19:43:59,424 | INFO     | extracted standard info from prmon json
[2025-10-12 15:44:37] 2025-10-12 19:43:59,424 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:44:37] 2025-10-12 19:43:59,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:44:37] 2025-10-12 19:43:59,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:44:37] 2025-10-12 19:43:59,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | sum of square deviations: 70374491.40983604
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | sum of deviations: 1709351749.3934426
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | mean x: 1760296271.0983605
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | mean y: 2476120.9344262294
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | -- intersect: -42754003537.71902
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | intersect: -42754003537.71902
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | chi2: 0.045509046694848995
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | -- intersect: -42754003537.71902
[2025-10-12 15:44:37] 2025-10-12 19:43:59,426 | INFO     | current memory leak: 24.29 B/s (using 61 data points, chi2=0.05)
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | could have reported an average CPU frequency of 3750 MHz (6 samples)
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | ..............................
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | . Timing measurements:
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | . get job = 0 s
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | . initial setup = 3 s
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | . payload setup = 22 s
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | . stage-in = 0 s
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | . payload execution = 4104 s
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | . stage-out = 0 s
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | . log creation = 0 s
[2025-10-12 15:44:37] 2025-10-12 19:43:59,427 | INFO     | ..............................
[2025-10-12 15:44:37] 2025-10-12 19:43:59,483 | INFO     | 
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | job summary report
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | --------------------------------------------------
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | PanDA job id: 6840428786
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | task id: 46676269
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | errors: (none)
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | pilot state: finished 
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | transexitcode: 0
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | exeerrorcode: 0
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | exeerrordiag: 
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | exitcode: 0
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | exitmsg: OK
[2025-10-12 15:44:37] 2025-10-12 19:43:59,484 | INFO     | cpuconsumptiontime: 24001 s
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | nevents: 400
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | neventsw: 0
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | pid: 4063912
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | pgrp: 4063912
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | corecount: 8
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | event service: False
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | sizes: {0: 2348857, 11: 2348857, 16: 2349147, 21: 2349175, 4130: 2375310, 4131: 2384492, 4142: 2384630}
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | --------------------------------------------------
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | 
[2025-10-12 15:44:37] 2025-10-12 19:43:59,485 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,520 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,520 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,520 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:44:37] 2025-10-12 19:43:59,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:44:37] 2025-10-12 19:43:59,520 | INFO     | job 6840428786 has completed (purged errors)
[2025-10-12 15:44:37] 2025-10-12 19:43:59,520 | INFO     | overall cleanup function is called
[2025-10-12 15:44:37] 2025-10-12 19:44:00,527 | INFO     | --- collectZombieJob: --- 10, [4063912]
[2025-10-12 15:44:37] 2025-10-12 19:44:00,527 | INFO     | zombie collector waiting for pid 4063912
[2025-10-12 15:44:37] 2025-10-12 19:44:00,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:44:37] 2025-10-12 19:44:00,527 | INFO     | collected zombie processes
[2025-10-12 15:44:37] 2025-10-12 19:44:00,527 | INFO     | will attempt to kill all subprocesses of pid=4063912
[2025-10-12 15:44:37] 2025-10-12 19:44:00,923 | INFO     | process IDs to be killed: [4063912] (in reverse order)
[2025-10-12 15:44:37] 2025-10-12 19:44:01,109 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:44:37] 2025-10-12 19:44:01,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:44:37] 2025-10-12 19:44:01,131 | INFO     | did not find any defunct processes belonging to 4063912
[2025-10-12 15:44:37] 2025-10-12 19:44:01,152 | INFO     | did not find any defunct processes belonging to 4063912
[2025-10-12 15:44:37] 2025-10-12 19:44:01,152 | INFO     | ready for new job
[2025-10-12 15:44:37] 2025-10-12 19:44:01,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:44:37] 2025-10-12 19:44:01,154 | INFO     | ***************************************
[2025-10-12 15:44:37] 2025-10-12 19:44:01,154 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:44:37] 2025-10-12 19:44:01,154 | INFO     | ***************************************
[2025-10-12 15:44:37] 2025-10-12 19:44:01,154 | INFO     | 
[2025-10-12 15:44:37] 2025-10-12 19:44:01,165 | INFO     | architecture information:
[2025-10-12 15:44:37] 2025-10-12 19:44:01,171 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:44:37] 2025-10-12 19:44:01,189 | INFO     | cat /etc/os-release:
[2025-10-12 15:44:37] NAME="CentOS Linux"
[2025-10-12 15:44:37] VERSION="7 (Core)"
[2025-10-12 15:44:37] ID="centos"
[2025-10-12 15:44:37] ID_LIKE="rhel fedora"
[2025-10-12 15:44:37] VERSION_ID="7"
[2025-10-12 15:44:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:44:37] ANSI_COLOR="0;31"
[2025-10-12 15:44:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:44:37] HOME_URL="https://www.centos.org/"
[2025-10-12 15:44:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:44:37] 
[2025-10-12 15:44:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:44:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:44:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:44:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:44:37] 
[2025-10-12 15:44:37] 2025-10-12 19:44:01,189 | INFO     | ***************************************
[2025-10-12 15:44:37] 2025-10-12 19:44:01,692 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 15:44:37] 2025-10-12 19:44:01,773 | INFO     | sufficient remaining disk space (169837854720 B)
[2025-10-12 15:44:37] 2025-10-12 19:44:01,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:44:37] 2025-10-12 19:44:01,773 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:44:37] 2025-10-12 19:44:01,773 | INFO     | update_server=False
[2025-10-12 15:44:37] 2025-10-12 19:44:01,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:44:37] 2025-10-12 19:44:01,861 | INFO     | all payload control threads have been joined
[2025-10-12 15:44:37] 2025-10-12 19:44:02,171 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:44:37] 2025-10-12 19:44:02,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:44:37] 2025-10-12 19:44:02,214 | INFO     | aborting loop
[2025-10-12 15:44:37] 2025-10-12 19:44:02,439 | INFO     | all job control threads have been joined
[2025-10-12 15:44:37] 2025-10-12 19:44:02,523 | INFO     | all data control threads have been joined
[2025-10-12 15:44:37] 2025-10-12 19:44:02,780 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:02,867 | INFO     | [payload] control thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:02,923 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:03,219 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:03,444 | INFO     | [job] control thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:03,529 | INFO     | [data] control thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:03,698 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:03,772 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:03,827 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:04,144 | INFO     | [job] validate thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:04,151 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:04,184 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:04,236 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:04,249 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:44:37] 2025-10-12 19:44:04,504 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:44:37] 2025-10-12 19:44:05,510 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:08,259 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:11,839 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:44:37] 2025-10-12 19:44:12,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:44:37] 2025-10-12 19:44:30,911 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:44:37] 2025-10-12 19:44:31,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312314447680)>', '<ExcThread(monitor, started 140311657432832)>']
[2025-10-12 15:44:37] 2025-10-12 19:44:32,825 | INFO     | PID=4055754 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:44:37] 2025-10-12 19:44:32,825 | INFO     | .. there are 23 such processes running
[2025-10-12 15:44:37] 2025-10-12 19:44:32,825 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:44:37] 2025-10-12 19:44:32,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:44:37] 2025-10-12 19:44:32,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:44:37] 2025-10-12 19:44:32,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:44:37] 2025-10-12 19:44:32,825 | INFO     | [monitor] control thread has ended
[2025-10-12 15:44:37] 2025-10-12 19:44:36,857 | INFO     | all workflow threads have been joined
[2025-10-12 15:44:37] 2025-10-12 19:44:36,858 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:44:37] 2025-10-12 19:44:36,858 | INFO     | traces error code: 0
[2025-10-12 15:44:37] 2025-10-12 19:44:36,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:44:37] 2025-10-12 19:44:37,055 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:44:37] 2025-10-12 19:44:37,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:44:37] 2025-10-12 19:44:37,083 [wrapper] pilotpid: 4055754
[2025-10-12 15:44:37] 2025-10-12 19:44:37,112 [wrapper] Pilot exit status: 0
[2025-10-12 15:44:37] 2025-10-12 19:44:37,254 [wrapper] pandaids: 6840428786
[2025-10-12 15:44:37] 2025-10-12 19:44:37,425 [wrapper] cleanup supervisor_pilot   12389 4055755
[2025-10-12 15:44:37] 2025-10-12 19:44:37,440 [wrapper] Test setup, not cleaning
[2025-10-12 15:44:37] 2025-10-12 19:44:37,470 [wrapper] apfmon messages muted
[2025-10-12 15:44:37] 2025-10-12 19:44:37,504 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:44:37] 2025-10-12 19:44:37,515 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:44:37]  *** Error codes and diagnostics ***
[2025-10-12 15:44:37]     "exeErrorCode": 0,
[2025-10-12 15:44:37]     "exeErrorDiag": "",
[2025-10-12 15:44:37]     "pilotErrorCode": 0,
[2025-10-12 15:44:37]     "pilotErrorDiag": "",
[2025-10-12 15:44:37]  *** Listing of results directory ***
[2025-10-12 15:44:37] total 402232
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 15:44:37] -rwx------. 1 boincer umatlas     36292 Oct 12 13:07 runpilot2-wrapper.sh
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:07 queuedata.json
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:44:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:33 run_atlas
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:33 job.xml
[2025-10-12 15:44:37] -rw-r--r--. 2 boincer umatlas 222121714 Oct 12 14:33 EVNT.46676267._004799.pool.root.1
[2025-10-12 15:44:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:33 start_atlas.sh
[2025-10-12 15:44:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:33 shared
[2025-10-12 15:44:37] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 14:33 input.tar.gz
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:33 boinc_lockfile
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:33 pandaJob.out
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas    975528 Oct 12 14:34 agis_schedconf.cvmfs.json
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:44:37] drwx------. 5 boincer umatlas      4096 Oct 12 14:34 pilot3
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 15:41 init_data.xml
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas 183990028 Oct 12 15:43 HITS.46676269._084370.pool.root.1
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas       530 Oct 12 15:43 boinc_task_state.xml
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas        95 Oct 12 15:43 pilot_heartbeat.json
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas      1056 Oct 12 15:43 memory_monitor_summary.json
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas    335606 Oct 12 15:43 log.46676269._084370.job.log.tgz.1
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas      7817 Oct 12 15:43 heartbeat.json
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:44 wrapper_checkpoint.txt
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:44 boinc_mmap_file
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas      4897 Oct 12 15:44 pilotlog.txt
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas    601393 Oct 12 15:44 log.46676269._084370.job.log.1
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas       357 Oct 12 15:44 output.list
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:44 runtime_log
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas    952320 Oct 12 15:44 result.tar.gz
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas       657 Oct 12 15:44 TLgLDmCjES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmamkNDmGcWLdn.diag
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 15:44 runtime_log.err
[2025-10-12 15:44:37] -rw-r--r--. 1 boincer umatlas     22285 Oct 12 15:44 stderr.txt
[2025-10-12 15:44:37] HITS file was successfully produced:
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas 183990028 Oct 12 15:43 shared/HITS.pool.root.1
[2025-10-12 15:44:37]  *** Contents of shared directory: ***
[2025-10-12 15:44:37] total 398112
[2025-10-12 15:44:37] -rw-r--r--. 2 boincer umatlas 222121714 Oct 12 14:33 ATLAS.root_0
[2025-10-12 15:44:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:33 start_atlas.sh
[2025-10-12 15:44:37] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 14:33 input.tar.gz
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas 183990028 Oct 12 15:43 HITS.pool.root.1
[2025-10-12 15:44:37] -rw-------. 1 boincer umatlas    952320 Oct 12 15:44 result.tar.gz
15:44:39 (4051679): run_atlas exited; CPU time 24105.265263
15:44:39 (4051679): called boinc_finish(0)

</stderr_txt>
]]>

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