Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:30:48 (4957): wrapper (7.7.26015): starting
14:30:48 (4957): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 14:30:48] Arguments: --nthreads 12
[2025-10-12 14:30:48] Threads: 12
[2025-10-12 14:30:48] Checking for CVMFS
[2025-10-12 14:30:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:30:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:30:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:30:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:30:48] 2.11.2.0 3009 8511 85316 151631 1 59 18676984 20275200 1 130560 0 8086043 99.993 285067 43581 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:30:48] CVMFS is ok
[2025-10-12 14:30:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:30:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:30:48] Further information can be found at the LHC@home message board.
[2025-10-12 14:30:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:30:48] Checking for apptainer binary...
[2025-10-12 14:30:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:30:48] Running /usr/bin/apptainer --version
[2025-10-12 14:30:48] apptainer version 1.3.2-1.el7
[2025-10-12 14:30:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:30:49] c-115-42.aglt2.org
[2025-10-12 14:30:49] apptainer works
[2025-10-12 14:30:50] Set ATHENA_PROC_NUMBER=12
[2025-10-12 14:30:50] Set ATHENA_CORE_NUMBER=12
[2025-10-12 14:30:50] Starting ATLAS job with PandaID=6840223502
[2025-10-12 14:30:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:33:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:33:15]  scope=mc23_13p6TeV
[2025-10-12 15:33:15]  status=None
[2025-10-12 15:33:15]  status_code=0
[2025-10-12 15:33:15]  storage_token=
[2025-10-12 15:33:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840223502/log.46676269._081611.job.log.tgz.1
[2025-10-12 15:33:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/2a/log.46676269._081611.job.log.tgz.1
[2025-10-12 15:33:15]  workdir=None
[2025-10-12 15:33:15] ]
[2025-10-12 15:33:15] 2025-10-12 19:32:05,832 | INFO     | transferring file log.46676269._081611.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840223502/log.46676269._081611.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 15:33:15] 2025-10-12 19:32:05,832 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840223502/log.46676269._081611.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._081611.job
[2025-10-12 15:33:15] 2025-10-12 19:32:05,853 | INFO     | adding to output.list: log.46676269._081611.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/2a/log.46676269._081611.job.log.tg
[2025-10-12 15:33:15] 2025-10-12 19:32:05,854 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:33:15] 2025-10-12 19:32:05,854 | INFO     | summary of transferred files:
[2025-10-12 15:33:15] 2025-10-12 19:32:05,854 | INFO     |  -- lfn=log.46676269._081611.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:33:15] 2025-10-12 19:32:05,855 | INFO     | stage-out finished correctly
[2025-10-12 15:33:15] 2025-10-12 19:32:06,064 | WARNING  | process 15173 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 15:33:15] 2025-10-12 19:32:06,064 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840223502/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:33:15] 2025-10-12 19:32:06,147 | INFO     | number of running child processes to parent process 15173: 1
[2025-10-12 15:33:15] 2025-10-12 19:32:06,147 | INFO     | maximum number of monitored processes: 6
[2025-10-12 15:33:15] 2025-10-12 19:32:07,401 | INFO     | time since job start (3663s) is within the limit (172800.0s)
[2025-10-12 15:33:15] 2025-10-12 19:32:08,574 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:33:15] 2025-10-12 19:32:08,651 | INFO     | monitor loop #276: job 0:6840223502 is in state 'finished'
[2025-10-12 15:33:15] 2025-10-12 19:32:08,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:33:15] 2025-10-12 19:32:08,672 | INFO     | job 6840223502 has state=finished
[2025-10-12 15:33:15] 2025-10-12 19:32:08,672 | INFO     | preparing for final server update for job 6840223502 in state='finished'
[2025-10-12 15:33:15] 2025-10-12 19:32:08,672 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:33:15] 2025-10-12 19:32:08,673 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:33:15] 2025-10-12 19:32:08,673 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:33:15] 2025-10-12 19:32:08,673 | INFO     | job 6840223502 has finished - writing final server update
[2025-10-12 15:33:15] 2025-10-12 19:32:08,673 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:33:15] 2025-10-12 19:32:08,674 | INFO     | executing command: lscpu
[2025-10-12 15:33:15] 2025-10-12 19:32:08,697 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:33:15] 2025-10-12 19:32:09,402 | INFO     | time since job start (3665s) is within the limit (172800.0s)
[2025-10-12 15:33:15] 2025-10-12 19:32:11,154 | INFO     | monitor loop #277: job 0:6840223502 is in state 'finished'
[2025-10-12 15:33:15] 2025-10-12 19:32:11,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:33:15] 2025-10-12 19:32:11,407 | INFO     | time since job start (3667s) is within the limit (172800.0s)
[2025-10-12 15:33:15] 2025-10-12 19:32:13,027 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 15:33:15] 2025-10-12 19:32:13,031 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-10-12 15:33:15] 2025-10-12 19:32:13,033 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840223502/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:33:15] 2025-10-12 19:32:13,034 | INFO     | extracted standard info from prmon json
[2025-10-12 15:33:15] 2025-10-12 19:32:13,034 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:33:15] 2025-10-12 19:32:13,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:33:15] 2025-10-12 19:32:13,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:33:15] 2025-10-12 19:32:13,035 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:33:15] 2025-10-12 19:32:13,036 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:33:15] 2025-10-12 19:32:13,037 | INFO     | sum of square deviations: 46147842.0
[2025-10-12 15:33:15] 2025-10-12 19:32:13,037 | INFO     | sum of deviations: -3619350576.0
[2025-10-12 15:33:15] 2025-10-12 19:32:13,037 | INFO     | mean x: 1760295783.0
[2025-10-12 15:33:15] 2025-10-12 19:32:13,037 | INFO     | mean y: 2764934.5094339624
[2025-10-12 15:33:15] 2025-10-12 19:32:13,037 | INFO     | -- intersect: 138061822086.7685
[2025-10-12 15:33:15] 2025-10-12 19:32:13,037 | INFO     | intersect: 138061822086.7685
[2025-10-12 15:33:15] 2025-10-12 19:32:13,037 | INFO     | chi2: 0.04375700623849537
[2025-10-12 15:33:15] 2025-10-12 19:32:13,038 | INFO     | -- intersect: 138061822086.7685
[2025-10-12 15:33:15] 2025-10-12 19:32:13,038 | INFO     | current memory leak: -78.43 B/s (using 53 data points, chi2=0.04)
[2025-10-12 15:33:15] 2025-10-12 19:32:13,038 | INFO     | could have reported an average CPU frequency of 1989 MHz (6 samples)
[2025-10-12 15:33:15] 2025-10-12 19:32:13,038 | INFO     | ..............................
[2025-10-12 15:33:15] 2025-10-12 19:32:13,038 | INFO     | . Timing measurements:
[2025-10-12 15:33:15] 2025-10-12 19:32:13,038 | INFO     | . get job = 0 s
[2025-10-12 15:33:15] 2025-10-12 19:32:13,038 | INFO     | . initial setup = 2 s
[2025-10-12 15:33:15] 2025-10-12 19:32:13,039 | INFO     | . payload setup = 6 s
[2025-10-12 15:33:15] 2025-10-12 19:32:13,039 | INFO     | . stage-in = 0 s
[2025-10-12 15:33:15] 2025-10-12 19:32:13,039 | INFO     | . payload execution = 3633 s
[2025-10-12 15:33:15] 2025-10-12 19:32:13,039 | INFO     | . stage-out = 0 s
[2025-10-12 15:33:15] 2025-10-12 19:32:13,039 | INFO     | . log creation = 0 s
[2025-10-12 15:33:15] 2025-10-12 19:32:13,039 | INFO     | ..............................
[2025-10-12 15:33:15] 2025-10-12 19:32:13,115 | INFO     | 
[2025-10-12 15:33:15] 2025-10-12 19:32:13,115 | INFO     | job summary report
[2025-10-12 15:33:15] 2025-10-12 19:32:13,115 | INFO     | --------------------------------------------------
[2025-10-12 15:33:15] 2025-10-12 19:32:13,115 | INFO     | PanDA job id: 6840223502
[2025-10-12 15:33:15] 2025-10-12 19:32:13,115 | INFO     | task id: 46676269
[2025-10-12 15:33:15] 2025-10-12 19:32:13,115 | INFO     | errors: (none)
[2025-10-12 15:33:15] 2025-10-12 19:32:13,116 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:33:15] 2025-10-12 19:32:13,116 | INFO     | pilot state: finished 
[2025-10-12 15:33:15] 2025-10-12 19:32:13,116 | INFO     | transexitcode: 0
[2025-10-12 15:33:15] 2025-10-12 19:32:13,116 | INFO     | exeerrorcode: 0
[2025-10-12 15:33:15] 2025-10-12 19:32:13,116 | INFO     | exeerrordiag: 
[2025-10-12 15:33:15] 2025-10-12 19:32:13,116 | INFO     | exitcode: 0
[2025-10-12 15:33:15] 2025-10-12 19:32:13,116 | INFO     | exitmsg: OK
[2025-10-12 15:33:15] 2025-10-12 19:32:13,117 | INFO     | cpuconsumptiontime: 39755 s
[2025-10-12 15:33:15] 2025-10-12 19:32:13,117 | INFO     | nevents: 400
[2025-10-12 15:33:15] 2025-10-12 19:32:13,117 | INFO     | neventsw: 0
[2025-10-12 15:33:15] 2025-10-12 19:32:13,117 | INFO     | pid: 15173
[2025-10-12 15:33:15] 2025-10-12 19:32:13,117 | INFO     | pgrp: 15173
[2025-10-12 15:33:15] 2025-10-12 19:32:13,117 | INFO     | corecount: 12
[2025-10-12 15:33:15] 2025-10-12 19:32:13,117 | INFO     | event service: False
[2025-10-12 15:33:15] 2025-10-12 19:32:13,118 | INFO     | sizes: {0: 2348856, 1: 2348856, 5: 2349146, 11: 2349202, 3644: 2374903, 3645: 2383901, 3648: 2384085, 3652: 2384279}
[2025-10-12 15:33:15] 2025-10-12 19:32:13,118 | INFO     | --------------------------------------------------
[2025-10-12 15:33:15] 2025-10-12 19:32:13,118 | INFO     | 
[2025-10-12 15:33:15] 2025-10-12 19:32:13,118 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:33:15] 2025-10-12 19:32:13,141 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,141 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,141 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,143 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,144 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:33:15] 2025-10-12 19:32:13,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,144 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:33:15] 2025-10-12 19:32:13,145 | INFO     | job 6840223502 has completed (purged errors)
[2025-10-12 15:33:15] 2025-10-12 19:32:13,145 | INFO     | overall cleanup function is called
[2025-10-12 15:33:15] 2025-10-12 19:32:14,153 | INFO     | --- collectZombieJob: --- 10, [15173]
[2025-10-12 15:33:15] 2025-10-12 19:32:14,153 | INFO     | zombie collector waiting for pid 15173
[2025-10-12 15:33:15] 2025-10-12 19:32:14,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:33:15] 2025-10-12 19:32:14,153 | INFO     | collected zombie processes
[2025-10-12 15:33:15] 2025-10-12 19:32:14,153 | INFO     | will attempt to kill all subprocesses of pid=15173
[2025-10-12 15:33:15] 2025-10-12 19:32:14,237 | INFO     | process IDs to be killed: [15173] (in reverse order)
[2025-10-12 15:33:15] 2025-10-12 19:32:14,284 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:33:15] 2025-10-12 19:32:14,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:33:15] 2025-10-12 19:32:14,287 | INFO     | did not find any defunct processes belonging to 15173
[2025-10-12 15:33:15] 2025-10-12 19:32:14,289 | INFO     | did not find any defunct processes belonging to 15173
[2025-10-12 15:33:15] 2025-10-12 19:32:14,289 | INFO     | ready for new job
[2025-10-12 15:33:15] 2025-10-12 19:32:14,290 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:33:15] 2025-10-12 19:32:14,290 | INFO     | ***************************************
[2025-10-12 15:33:15] 2025-10-12 19:32:14,291 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:33:15] 2025-10-12 19:32:14,291 | INFO     | ***************************************
[2025-10-12 15:33:15] 2025-10-12 19:32:14,291 | INFO     | 
[2025-10-12 15:33:15] 2025-10-12 19:32:14,291 | INFO     | architecture information:
[2025-10-12 15:33:15] 2025-10-12 19:32:14,292 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:33:15] 2025-10-12 19:32:14,305 | INFO     | cat /etc/os-release:
[2025-10-12 15:33:15] NAME="CentOS Linux"
[2025-10-12 15:33:15] VERSION="7 (Core)"
[2025-10-12 15:33:15] ID="centos"
[2025-10-12 15:33:15] ID_LIKE="rhel fedora"
[2025-10-12 15:33:15] VERSION_ID="7"
[2025-10-12 15:33:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:33:15] ANSI_COLOR="0;31"
[2025-10-12 15:33:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:33:15] HOME_URL="https://www.centos.org/"
[2025-10-12 15:33:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:33:15] 
[2025-10-12 15:33:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:33:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:33:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:33:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:33:15] 
[2025-10-12 15:33:15] 2025-10-12 19:32:14,305 | INFO     | ***************************************
[2025-10-12 15:33:15] 2025-10-12 19:32:14,808 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:33:15] 2025-10-12 19:32:14,824 | INFO     | sufficient remaining disk space (18597543936 B)
[2025-10-12 15:33:15] 2025-10-12 19:32:14,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:33:15] 2025-10-12 19:32:14,824 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:33:15] 2025-10-12 19:32:14,824 | INFO     | update_server=False
[2025-10-12 15:33:15] 2025-10-12 19:32:14,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:33:15] 2025-10-12 19:32:14,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:33:15] 2025-10-12 19:32:14,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:33:15] 2025-10-12 19:32:14,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:33:15] 2025-10-12 19:32:14,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:33:15] 2025-10-12 19:32:14,826 | INFO     | aborting loop
[2025-10-12 15:33:15] 2025-10-12 19:32:14,982 | INFO     | all data control threads have been joined
[2025-10-12 15:33:15] 2025-10-12 19:32:15,090 | INFO     | all job control threads have been joined
[2025-10-12 15:33:15] 2025-10-12 19:32:15,391 | INFO     | all payload control threads have been joined
[2025-10-12 15:33:15] 2025-10-12 19:32:15,827 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:15,830 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:15,831 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:15,987 | INFO     | [data] control thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:16,095 | INFO     | [job] control thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:16,258 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:16,397 | INFO     | [payload] control thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:16,515 | INFO     | [job] validate thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:16,749 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:16,755 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:16,830 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:16,831 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:17,015 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:17,220 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:18,826 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:25,032 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:33:15] 2025-10-12 19:32:26,037 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:33:15] 2025-10-12 19:32:44,644 | INFO     | PID=8758 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 15:33:15] 2025-10-12 19:32:44,644 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:33:15] 2025-10-12 19:32:44,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:33:15] 2025-10-12 19:32:44,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:33:15] 2025-10-12 19:33:09,695 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:33:15] 2025-10-12 19:33:10,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139834171160384)>', '<ExcThread(monitor, started 139832852473600)>']
[2025-10-12 15:33:15] 2025-10-12 19:33:10,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:33:15] 2025-10-12 19:33:10,772 | INFO     | [monitor] control thread has ended
[2025-10-12 15:33:15] 2025-10-12 19:33:15,031 | INFO     | all workflow threads have been joined
[2025-10-12 15:33:15] 2025-10-12 19:33:15,031 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:33:15] 2025-10-12 19:33:15,037 | INFO     | traces error code: 0
[2025-10-12 15:33:15] 2025-10-12 19:33:15,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:33:15] 2025-10-12 19:33:15,138 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:33:15] 2025-10-12 19:33:15,142 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:33:15] 2025-10-12 19:33:15,145 [wrapper] pilotpid: 8758
[2025-10-12 15:33:15] 2025-10-12 19:33:15,149 [wrapper] Pilot exit status: 0
[2025-10-12 15:33:15] 2025-10-12 19:33:15,165 [wrapper] pandaids: 6840223502
[2025-10-12 15:33:15] 2025-10-12 19:33:15,213 [wrapper] cleanup supervisor_pilot 12854 8759
[2025-10-12 15:33:15] 2025-10-12 19:33:15,217 [wrapper] Test setup, not cleaning
[2025-10-12 15:33:15] 2025-10-12 19:33:15,221 [wrapper] apfmon messages muted
[2025-10-12 15:33:15] 2025-10-12 19:33:15,225 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:33:15] 2025-10-12 19:33:15,229 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:33:15]  *** Error codes and diagnostics ***
[2025-10-12 15:33:15]     "exeErrorCode": 0,
[2025-10-12 15:33:15]     "exeErrorDiag": "",
[2025-10-12 15:33:15]     "pilotErrorCode": 0,
[2025-10-12 15:33:15]     "pilotErrorDiag": "",
[2025-10-12 15:33:15]  *** Listing of results directory ***
[2025-10-12 15:33:15] total 402004
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 11:04 queuedata.json
[2025-10-12 15:33:15] -rwx------ 1 boincer umatlas     36292 Oct 12 11:05 runpilot2-wrapper.sh
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:33:15] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:30 run_atlas
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:30 job.xml
[2025-10-12 15:33:15] -rw-r--r-- 2 boincer umatlas 218766848 Oct 12 14:30 EVNT.46676267._004546.pool.root.1
[2025-10-12 15:33:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:30 start_atlas.sh
[2025-10-12 15:33:15] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:30 shared
[2025-10-12 15:33:15] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 14:30 input.tar.gz
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:30 boinc_lockfile
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 14:30 pandaJob.out
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas    975528 Oct 12 14:31 agis_schedconf.cvmfs.json
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas   1560580 Oct 12 14:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:33:15] drwx------ 5 boincer umatlas      4096 Oct 12 14:31 pilot3
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas      5954 Oct 12 15:29 init_data.xml
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas 187119974 Oct 12 15:31 HITS.46676269._081611.pool.root.1
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas        95 Oct 12 15:31 pilot_heartbeat.json
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas       530 Oct 12 15:31 boinc_task_state.xml
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas      1049 Oct 12 15:32 memory_monitor_summary.json
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas    386734 Oct 12 15:32 log.46676269._081611.job.log.tgz.1
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas      7859 Oct 12 15:32 heartbeat.json
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:32 boinc_mmap_file
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas        27 Oct 12 15:32 wrapper_checkpoint.txt
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas      4817 Oct 12 15:33 pilotlog.txt
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas    544472 Oct 12 15:33 log.46676269._081611.job.log.1
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas       357 Oct 12 15:33 output.list
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:33 runtime_log
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas    952320 Oct 12 15:33 result.tar.gz
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 15:33 runtime_log.err
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas       659 Oct 12 15:33 PfdMDmOoCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKNkNDmSQvFin.diag
[2025-10-12 15:33:15] -rw-r--r-- 1 boincer umatlas     21918 Oct 12 15:33 stderr.txt
[2025-10-12 15:33:15] HITS file was successfully produced:
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas 187119974 Oct 12 15:31 shared/HITS.pool.root.1
[2025-10-12 15:33:15]  *** Contents of shared directory: ***
[2025-10-12 15:33:15] total 397888
[2025-10-12 15:33:15] -rw-r--r-- 2 boincer umatlas 218766848 Oct 12 14:30 ATLAS.root_0
[2025-10-12 15:33:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:30 start_atlas.sh
[2025-10-12 15:33:15] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 14:30 input.tar.gz
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas 187119974 Oct 12 15:31 HITS.pool.root.1
[2025-10-12 15:33:15] -rw------- 1 boincer umatlas    952320 Oct 12 15:33 result.tar.gz
15:33:16 (4957): run_atlas exited; CPU time 39750.121183
15:33:16 (4957): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN