Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:32:56 (577085): wrapper (7.7.26015): starting
15:32:56 (577085): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 15:32:56] Arguments: --nthreads 9
[2025-10-12 15:32:56] Threads: 9
[2025-10-12 15:32:56] Checking for CVMFS
[2025-10-12 15:32:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:32:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:32:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:32:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:32:59] 2.13.2.0 2531586 129685 804676 151635 1 284 26683737 32935937 43827 16776704 0 188655434 99.742 124817164 23418 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:32:59] CVMFS is ok
[2025-10-12 15:32:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:32:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:32:59] Further information can be found at the LHC@home message board.
[2025-10-12 15:32:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:32:59] Checking for apptainer binary...
[2025-10-12 15:32:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:32:59] Running /usr/bin/apptainer --version
[2025-10-12 15:32:59] apptainer version 1.4.3-1.el9
[2025-10-12 15:32:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:33:00] c-1-3.aglt2.org
[2025-10-12 15:33:00] apptainer works
[2025-10-12 15:33:00] Set ATHENA_PROC_NUMBER=9
[2025-10-12 15:33:00] Set ATHENA_CORE_NUMBER=9
[2025-10-12 15:33:00] Starting ATLAS job with PandaID=6840182288
[2025-10-12 15:33:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:13:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:13:52] 2025-10-13 00:12:59,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:13:52] 2025-10-13 00:12:59,770 | INFO     | time since job start (16727s) is within the limit (172800.0s)
[2025-10-12 20:13:52] 2025-10-13 00:13:00,952 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 20:13:52] 2025-10-13 00:13:00,964 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2723.1046999999994
[2025-10-12 20:13:52] 2025-10-13 00:13:01,038 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840182288/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:13:52] 2025-10-13 00:13:01,039 | INFO     | extracted standard info from prmon json
[2025-10-12 20:13:52] 2025-10-13 00:13:01,039 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:13:52] 2025-10-13 00:13:01,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:13:52] 2025-10-13 00:13:01,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:13:52] 2025-10-13 00:13:01,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:13:52] 2025-10-13 00:13:01,070 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:13:52] 2025-10-13 00:13:01,070 | INFO     | sum of square deviations: 6171365317.963087
[2025-10-12 20:13:52] 2025-10-13 00:13:01,072 | INFO     | sum of deviations: 45514522053.59042
[2025-10-12 20:13:52] 2025-10-13 00:13:01,072 | INFO     | mean x: 1760306057.309963
[2025-10-12 20:13:52] 2025-10-13 00:13:01,072 | INFO     | mean y: 2128197.040590406
[2025-10-12 20:13:52] 2025-10-13 00:13:01,073 | INFO     | -- intersect: -12980329450.264473
[2025-10-12 20:13:52] 2025-10-13 00:13:01,098 | INFO     | intersect: -12980329450.264473
[2025-10-12 20:13:52] 2025-10-13 00:13:01,098 | INFO     | chi2: 3.6352808175567497
[2025-10-12 20:13:52] 2025-10-13 00:13:01,099 | INFO     | sum of square deviations: 5836030535.221841
[2025-10-12 20:13:52] 2025-10-13 00:13:01,101 | INFO     | sum of deviations: 59573136642.62032
[2025-10-12 20:13:52] 2025-10-13 00:13:01,101 | INFO     | mean x: 1760305904.8082707
[2025-10-12 20:13:52] 2025-10-13 00:13:01,101 | INFO     | mean y: 2134506.7180451127
[2025-10-12 20:13:52] 2025-10-13 00:13:01,101 | INFO     | -- intersect: -17966747521.41005
[2025-10-12 20:13:52] 2025-10-13 00:13:01,101 | INFO     | intersect: -17966747521.41005
[2025-10-12 20:13:52] 2025-10-13 00:13:01,101 | INFO     | chi2: 2.9586058837522775
[2025-10-12 20:13:52] 2025-10-13 00:13:01,102 | INFO     | current chi2=2.9586058837522775 (change=18.614103497491598 %)
[2025-10-12 20:13:52] 2025-10-13 00:13:01,116 | INFO     | right removable region: 265
[2025-10-12 20:13:52] 2025-10-13 00:13:01,117 | INFO     | sum of square deviations: 5836012479.973706
[2025-10-12 20:13:52] 2025-10-13 00:13:01,119 | INFO     | sum of deviations: -9451294826.894737
[2025-10-12 20:13:52] 2025-10-13 00:13:01,119 | INFO     | mean x: 1760306209.8157895
[2025-10-12 20:13:52] 2025-10-13 00:13:01,119 | INFO     | mean y: 2153107.736842105
[2025-10-12 20:13:52] 2025-10-13 00:13:01,119 | INFO     | -- intersect: 2852930591.7934923
[2025-10-12 20:13:52] 2025-10-13 00:13:01,119 | INFO     | intersect: 2852930591.7934923
[2025-10-12 20:13:52] 2025-10-13 00:13:01,143 | INFO     | chi2: 1.3536107712551972
[2025-10-12 20:13:52] 2025-10-13 00:13:01,143 | INFO     | current chi2=1.3536107712551972 (change=62.76461601761619 %)
[2025-10-12 20:13:52] 2025-10-13 00:13:01,143 | INFO     | sum of square deviations: 5513047948.605387
[2025-10-12 20:13:52] 2025-10-13 00:13:01,145 | INFO     | sum of deviations: -29868293392.547897
[2025-10-12 20:13:52] 2025-10-13 00:13:01,145 | INFO     | mean x: 1760306362.3180077
[2025-10-12 20:13:52] 2025-10-13 00:13:01,145 | INFO     | mean y: 2162734.946360153
[2025-10-12 20:13:52] 2025-10-13 00:13:01,145 | INFO     | -- intersect: 9539055463.003124
[2025-10-12 20:13:52] 2025-10-13 00:13:01,145 | INFO     | intersect: 9539055463.003124
[2025-10-12 20:13:52] 2025-10-13 00:13:01,146 | INFO     | chi2: 1.04501932603522
[2025-10-12 20:13:52] 2025-10-13 00:13:01,146 | INFO     | current chi2=1.04501932603522 (change=22.797649942887325 %)
[2025-10-12 20:13:52] 2025-10-13 00:13:01,146 | INFO     | left removable region: 20
[2025-10-12 20:13:52] 2025-10-13 00:13:01,146 | INFO     | sum of square deviations: 4560020911.167379
[2025-10-12 20:13:52] 2025-10-13 00:13:01,170 | INFO     | sum of deviations: -16184464119.0
[2025-10-12 20:13:52] 2025-10-13 00:13:01,171 | INFO     | mean x: 1760306484.3183672
[2025-10-12 20:13:52] 2025-10-13 00:13:01,171 | INFO     | mean y: 2171122.0
[2025-10-12 20:13:52] 2025-10-13 00:13:01,171 | INFO     | -- intersect: 6249865527.111888
[2025-10-12 20:13:52] 2025-10-13 00:13:01,171 | INFO     | intersect: 6249865527.111888
[2025-10-12 20:13:52] 2025-10-13 00:13:01,171 | INFO     | chi2: 0.2283552387105718
[2025-10-12 20:13:52] 2025-10-13 00:13:01,171 | INFO     | -- intersect: 6249865527.111888
[2025-10-12 20:13:52] 2025-10-13 00:13:01,171 | INFO     | current memory leak: -3.55 B/s (using 245 data points, chi2=0.23)
[2025-10-12 20:13:52] 2025-10-13 00:13:01,172 | INFO     | could have reported an average CPU frequency of 2733 MHz (13 samples)
[2025-10-12 20:13:52] 2025-10-13 00:13:01,172 | INFO     | ..............................
[2025-10-12 20:13:52] 2025-10-13 00:13:01,172 | INFO     | . Timing measurements:
[2025-10-12 20:13:52] 2025-10-13 00:13:01,172 | INFO     | . get job = 0 s
[2025-10-12 20:13:52] 2025-10-13 00:13:01,172 | INFO     | . initial setup = 5 s
[2025-10-12 20:13:52] 2025-10-13 00:13:01,172 | INFO     | . payload setup = 45 s
[2025-10-12 20:13:52] 2025-10-13 00:13:01,173 | INFO     | . stage-in = 0 s
[2025-10-12 20:13:52] 2025-10-13 00:13:01,173 | INFO     | . payload execution = 16540 s
[2025-10-12 20:13:52] 2025-10-13 00:13:01,173 | INFO     | . stage-out = 7 s
[2025-10-12 20:13:52] 2025-10-13 00:13:01,173 | INFO     | . log creation = 1 s
[2025-10-12 20:13:52] 2025-10-13 00:13:01,173 | INFO     | ..............................
[2025-10-12 20:13:52] 2025-10-13 00:13:01,794 | INFO     | time since job start (16729s) is within the limit (172800.0s)
[2025-10-12 20:13:52] 2025-10-13 00:13:01,992 | INFO     | 
[2025-10-12 20:13:52] 2025-10-13 00:13:01,992 | INFO     | job summary report
[2025-10-12 20:13:52] 2025-10-13 00:13:01,992 | INFO     | --------------------------------------------------
[2025-10-12 20:13:52] 2025-10-13 00:13:01,992 | INFO     | PanDA job id: 6840182288
[2025-10-12 20:13:52] 2025-10-13 00:13:01,992 | INFO     | task id: 46676269
[2025-10-12 20:13:52] 2025-10-13 00:13:01,992 | INFO     | errors: (none)
[2025-10-12 20:13:52] 2025-10-13 00:13:01,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:13:52] 2025-10-13 00:13:01,992 | INFO     | pilot state: finished 
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | transexitcode: 0
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | exeerrorcode: 0
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | exeerrordiag: 
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | exitcode: 0
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | exitmsg: OK
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | cpuconsumptiontime: 45797 s
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | nevents: 400
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | neventsw: 0
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | pid: 595440
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | pgrp: 595440
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | corecount: 9
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | event service: False
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 3: 2348913, 13: 2348941, 25: 2348997, 36: 2349209, 37: 2349443, 48: 2349471, 16590: 2380866, 16591: 2380865, 16599: 239
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | --------------------------------------------------
[2025-10-12 20:13:52] 2025-10-13 00:13:01,993 | INFO     | 
[2025-10-12 20:13:52] 2025-10-13 00:13:01,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 20:13:52] 2025-10-13 00:13:02,173 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:13:52] 2025-10-13 00:13:02,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,175 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:13:52] 2025-10-13 00:13:02,175 | INFO     | job 6840182288 has completed (purged errors)
[2025-10-12 20:13:52] 2025-10-13 00:13:02,175 | INFO     | overall cleanup function is called
[2025-10-12 20:13:52] 2025-10-13 00:13:03,215 | INFO     | --- collectZombieJob: --- 10, [595440]
[2025-10-12 20:13:52] 2025-10-13 00:13:03,215 | INFO     | zombie collector waiting for pid 595440
[2025-10-12 20:13:52] 2025-10-13 00:13:03,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:13:52] 2025-10-13 00:13:03,215 | INFO     | collected zombie processes
[2025-10-12 20:13:52] 2025-10-13 00:13:03,215 | INFO     | will attempt to kill all subprocesses of pid=595440
[2025-10-12 20:13:52] 2025-10-13 00:13:06,560 | INFO     | process IDs to be killed: [595440] (in reverse order)
[2025-10-12 20:13:52] 2025-10-13 00:13:07,337 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:13:52] 2025-10-13 00:13:07,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:13:52] 2025-10-13 00:13:07,478 | INFO     | did not find any defunct processes belonging to 595440
[2025-10-12 20:13:52] 2025-10-13 00:13:07,586 | INFO     | did not find any defunct processes belonging to 595440
[2025-10-12 20:13:52] 2025-10-13 00:13:07,587 | INFO     | ready for new job
[2025-10-12 20:13:52] 2025-10-13 00:13:07,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:13:52] 2025-10-13 00:13:07,600 | INFO     | ***************************************
[2025-10-12 20:13:52] 2025-10-13 00:13:07,600 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:13:52] 2025-10-13 00:13:07,600 | INFO     | ***************************************
[2025-10-12 20:13:52] 2025-10-13 00:13:07,600 | INFO     | 
[2025-10-12 20:13:52] 2025-10-13 00:13:07,625 | INFO     | architecture information:
[2025-10-12 20:13:52] 2025-10-13 00:13:07,649 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:13:52] 2025-10-13 00:13:07,784 | INFO     | cat /etc/os-release:
[2025-10-12 20:13:52] NAME="CentOS Linux"
[2025-10-12 20:13:52] VERSION="7 (Core)"
[2025-10-12 20:13:52] ID="centos"
[2025-10-12 20:13:52] ID_LIKE="rhel fedora"
[2025-10-12 20:13:52] VERSION_ID="7"
[2025-10-12 20:13:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:13:52] ANSI_COLOR="0;31"
[2025-10-12 20:13:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:13:52] HOME_URL="https://www.centos.org/"
[2025-10-12 20:13:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:13:52] 
[2025-10-12 20:13:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:13:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:13:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:13:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:13:52] 
[2025-10-12 20:13:52] 2025-10-13 00:13:07,784 | INFO     | ***************************************
[2025-10-12 20:13:52] 2025-10-13 00:13:08,293 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 20:13:52] 2025-10-13 00:13:08,413 | INFO     | sufficient remaining disk space (74866229248 B)
[2025-10-12 20:13:52] 2025-10-13 00:13:08,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:13:52] 2025-10-13 00:13:08,414 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:13:52] 2025-10-13 00:13:08,414 | INFO     | update_server=False
[2025-10-12 20:13:52] 2025-10-13 00:13:08,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:13:52] 2025-10-13 00:13:08,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:13:52] 2025-10-13 00:13:08,415 | INFO     | aborting loop
[2025-10-12 20:13:52] 2025-10-13 00:13:08,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:13:52] 2025-10-13 00:13:08,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:13:52] 2025-10-13 00:13:08,720 | INFO     | all payload control threads have been joined
[2025-10-12 20:13:52] 2025-10-13 00:13:09,330 | INFO     | all data control threads have been joined
[2025-10-12 20:13:52] 2025-10-13 00:13:09,330 | INFO     | all job control threads have been joined
[2025-10-12 20:13:52] 2025-10-13 00:13:09,420 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:09,424 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:09,726 | INFO     | [payload] control thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:09,819 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,184 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,336 | INFO     | [job] control thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,343 | INFO     | [data] control thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,426 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,630 | INFO     | [job] validate thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,668 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,668 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,675 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:10,926 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:11,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:13:52] 2025-10-13 00:13:12,033 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:12,526 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:13:52] 2025-10-13 00:13:38,768 | INFO     | PID=582302 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 20:13:52] 2025-10-13 00:13:38,773 | INFO     | .. there are 60 such processes running
[2025-10-12 20:13:52] 2025-10-13 00:13:38,773 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:13:52] 2025-10-13 00:13:38,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:13:52] 2025-10-13 00:13:38,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:13:52] 2025-10-13 00:13:42,872 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:13:52] 2025-10-13 00:13:44,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959134271296)>', '<ExcThread(monitor, started 139958387980032)>']
[2025-10-12 20:13:52] 2025-10-13 00:13:45,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:13:52] 2025-10-13 00:13:45,815 | INFO     | [monitor] control thread has ended
[2025-10-12 20:13:52] 2025-10-13 00:13:49,936 | INFO     | all workflow threads have been joined
[2025-10-12 20:13:52] 2025-10-13 00:13:49,936 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:13:52] 2025-10-13 00:13:49,936 | INFO     | traces error code: 0
[2025-10-12 20:13:52] 2025-10-13 00:13:49,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:13:52] 2025-10-13 00:13:51,403 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:13:52] 2025-10-13 00:13:51,413 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:13:52] 2025-10-13 00:13:51,457 [wrapper] pilotpid: 582302
[2025-10-12 20:13:52] 2025-10-13 00:13:51,484 [wrapper] Pilot exit status: 0
[2025-10-12 20:13:52] 2025-10-13 00:13:51,604 [wrapper] pandaids: 6840182288
[2025-10-12 20:13:52] 2025-10-13 00:13:51,821 [wrapper] cleanup supervisor_pilot 1766229 582303
[2025-10-12 20:13:52] 2025-10-13 00:13:51,847 [wrapper] Test setup, not cleaning
[2025-10-12 20:13:52] 2025-10-13 00:13:51,873 [wrapper] apfmon messages muted
[2025-10-12 20:13:52] 2025-10-13 00:13:51,891 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:13:52] 2025-10-13 00:13:51,907 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:13:52]  *** Error codes and diagnostics ***
[2025-10-12 20:13:52]     "exeErrorCode": 0,
[2025-10-12 20:13:52]     "exeErrorDiag": "",
[2025-10-12 20:13:52]     "pilotErrorCode": 0,
[2025-10-12 20:13:52]     "pilotErrorDiag": "",
[2025-10-12 20:13:52]  *** Listing of results directory ***
[2025-10-12 20:13:52] total 411596
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 20:13:52] -rwx------. 1 boincer umatlas     36292 Oct 12 10:42 runpilot2-wrapper.sh
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:42 queuedata.json
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:13:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:32 run_atlas
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:32 job.xml
[2025-10-12 20:13:52] -rw-r--r--. 2 boincer umatlas 218571312 Oct 12 15:32 EVNT.46676267._004530.pool.root.1
[2025-10-12 20:13:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:32 start_atlas.sh
[2025-10-12 20:13:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:32 shared
[2025-10-12 20:13:52] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 15:32 input.tar.gz
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:32 boinc_lockfile
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:33 pandaJob.out
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas    975536 Oct 12 15:34 agis_schedconf.cvmfs.json
[2025-10-12 20:13:52] drwx------. 5 boincer umatlas      4096 Oct 12 15:34 pilot3
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas 194145333 Oct 12 20:10 HITS.46676269._081135.pool.root.1
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas       531 Oct 12 20:10 boinc_task_state.xml
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas      1054 Oct 12 20:12 memory_monitor_summary.json
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:12 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas    504151 Oct 12 20:12 log.46676269._081135.job.log.tgz.1
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas        95 Oct 12 20:12 pilot_heartbeat.json
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas      7819 Oct 12 20:13 heartbeat.json
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 20:13 init_data.xml
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:13 boinc_mmap_file
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas        28 Oct 12 20:13 wrapper_checkpoint.txt
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas      4823 Oct 12 20:13 pilotlog.txt
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas   1919660 Oct 12 20:13 log.46676269._081135.job.log.1
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas       357 Oct 12 20:13 output.list
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:13 runtime_log
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas   2447360 Oct 12 20:13 result.tar.gz
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas       653 Oct 12 20:13 SbJNDmVSCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxIkNDmuUiZWo.diag
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 20:13 runtime_log.err
[2025-10-12 20:13:52] -rw-r--r--. 1 boincer umatlas     21225 Oct 12 20:13 stderr.txt
[2025-10-12 20:13:52] HITS file was successfully produced:
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas 194145333 Oct 12 20:10 shared/HITS.pool.root.1
[2025-10-12 20:13:52]  *** Contents of shared directory: ***
[2025-10-12 20:13:52] total 406020
[2025-10-12 20:13:52] -rw-r--r--. 2 boincer umatlas 218571312 Oct 12 15:32 ATLAS.root_0
[2025-10-12 20:13:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:32 start_atlas.sh
[2025-10-12 20:13:52] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 15:32 input.tar.gz
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas 194145333 Oct 12 20:10 HITS.pool.root.1
[2025-10-12 20:13:52] -rw-------. 1 boincer umatlas   2447360 Oct 12 20:13 result.tar.gz
20:13:54 (577085): run_atlas exited; CPU time 46585.265461
20:13:54 (577085): called boinc_finish(0)

</stderr_txt>
]]>

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