Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:28:57 (3870): wrapper (7.7.26015): starting
14:28:57 (3870): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:28:57] Arguments: --nthreads 8
[2025-10-12 14:28:57] Threads: 8
[2025-10-12 14:28:57] Checking for CVMFS
[2025-10-12 14:28:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:28:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:28:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:28:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:28:57] 2.11.2.0 5524 53245 126324 151631 3 188 12662546 18432000 1833 130560 0 47601170 99.975 2380410 39746 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:28:57] CVMFS is ok
[2025-10-12 14:28:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:28:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:28:57] Further information can be found at the LHC@home message board.
[2025-10-12 14:28:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:28:57] Checking for apptainer binary...
[2025-10-12 14:28:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:28:57] Running /usr/bin/apptainer --version
[2025-10-12 14:28:57] apptainer version 1.3.2-1.el7
[2025-10-12 14:28:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:28:58] c-206-5.aglt2.org
[2025-10-12 14:28:58] apptainer works
[2025-10-12 14:28:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:28:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:28:58] Starting ATLAS job with PandaID=6840182482
[2025-10-12 14:28:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:36:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:36:34] 2025-10-12 21:35:44,594 | INFO     | -- intersect: 1271347091.0504534
[2025-10-12 17:36:34] 2025-10-12 21:35:44,594 | INFO     | intersect: 1271347091.0504534
[2025-10-12 17:36:34] 2025-10-12 21:35:44,594 | INFO     | chi2: 0.030580377666642983
[2025-10-12 17:36:34] 2025-10-12 21:35:44,594 | INFO     | current chi2=0.030580377666642983 (change=97.8356397665786 %)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,594 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,595 | INFO     | sum of deviations: -3205685175.9999995
[2025-10-12 17:36:34] 2025-10-12 21:35:44,595 | INFO     | mean x: 1760299631.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,595 | INFO     | mean y: 2497862.907514451
[2025-10-12 17:36:34] 2025-10-12 21:35:44,596 | INFO     | -- intersect: 3517335308.578595
[2025-10-12 17:36:34] 2025-10-12 21:35:44,596 | INFO     | intersect: 3517335308.578595
[2025-10-12 17:36:34] 2025-10-12 21:35:44,596 | INFO     | chi2: 0.010805137327025038
[2025-10-12 17:36:34] 2025-10-12 21:35:44,596 | INFO     | current chi2=0.010805137327025038 (change=64.66643595833918 %)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,596 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,597 | INFO     | sum of deviations: -1270913954.9999995
[2025-10-12 17:36:34] 2025-10-12 21:35:44,597 | INFO     | mean x: 1760299783.5
[2025-10-12 17:36:34] 2025-10-12 21:35:44,597 | INFO     | mean y: 2495676.8928571427
[2025-10-12 17:36:34] 2025-10-12 21:35:44,597 | INFO     | -- intersect: 1524135628.8030071
[2025-10-12 17:36:34] 2025-10-12 21:35:44,597 | INFO     | intersect: 1524135628.8030071
[2025-10-12 17:36:34] 2025-10-12 21:35:44,598 | INFO     | chi2: 0.007224165636331547
[2025-10-12 17:36:34] 2025-10-12 21:35:44,598 | INFO     | current chi2=0.007224165636331547 (change=33.141380644344245 %)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,598 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,599 | INFO     | sum of deviations: 707436886.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,599 | INFO     | mean x: 1760299936.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,599 | INFO     | mean y: 2493325.380368098
[2025-10-12 17:36:34] 2025-10-12 21:35:44,599 | INFO     | -- intersect: -924869072.7901585
[2025-10-12 17:36:34] 2025-10-12 21:35:44,599 | INFO     | intersect: -924869072.7901585
[2025-10-12 17:36:34] 2025-10-12 21:35:44,600 | INFO     | chi2: 8.7763494069241e-05
[2025-10-12 17:36:34] 2025-10-12 21:35:44,600 | INFO     | current chi2=8.7763494069241e-05 (change=98.78514006340244 %)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,600 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 17:36:34] 2025-10-12 21:35:44,601 | INFO     | sum of deviations: 515902772.5000001
[2025-10-12 17:36:34] 2025-10-12 21:35:44,602 | INFO     | mean x: 1760300088.5
[2025-10-12 17:36:34] 2025-10-12 21:35:44,602 | INFO     | mean y: 2493565.1075949366
[2025-10-12 17:36:34] 2025-10-12 21:35:44,602 | INFO     | -- intersect: -740050591.7896751
[2025-10-12 17:36:34] 2025-10-12 21:35:44,602 | INFO     | intersect: -740050591.7896751
[2025-10-12 17:36:34] 2025-10-12 21:35:44,603 | INFO     | chi2: 1.736423045875609e-05
[2025-10-12 17:36:34] 2025-10-12 21:35:44,603 | INFO     | current chi2=1.736423045875609e-05 (change=80.21474572895129 %)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,603 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,604 | INFO     | sum of deviations: 467821565.9999999
[2025-10-12 17:36:34] 2025-10-12 21:35:44,604 | INFO     | mean x: 1760300241.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,605 | INFO     | mean y: 2493630.5555555555
[2025-10-12 17:36:34] 2025-10-12 21:35:44,605 | INFO     | -- intersect: -739043365.3750663
[2025-10-12 17:36:34] 2025-10-12 21:35:44,605 | INFO     | intersect: -739043365.3750663
[2025-10-12 17:36:34] 2025-10-12 21:35:44,605 | INFO     | chi2: 1.7122416466084458e-05
[2025-10-12 17:36:34] 2025-10-12 21:35:44,606 | INFO     | current chi2=1.7122416466084458e-05 (change=1.392598383475706 %)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,606 | INFO     | left removable region: 60
[2025-10-12 17:36:34] 2025-10-12 21:35:44,606 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,607 | INFO     | sum of deviations: 182860431.99999994
[2025-10-12 17:36:34] 2025-10-12 21:35:44,607 | INFO     | mean x: 1760300973.0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,607 | INFO     | mean y: 2493957.606837607
[2025-10-12 17:36:34] 2025-10-12 21:35:44,607 | INFO     | -- intersect: -645696134.2933555
[2025-10-12 17:36:34] 2025-10-12 21:35:44,608 | INFO     | intersect: -645696134.2933555
[2025-10-12 17:36:34] 2025-10-12 21:35:44,608 | INFO     | chi2: 1.2109821142567925e-05
[2025-10-12 17:36:34] 2025-10-12 21:35:44,608 | INFO     | -- intersect: -645696134.2933555
[2025-10-12 17:36:34] 2025-10-12 21:35:44,608 | INFO     | current memory leak: 0.37 B/s (using 117 data points, chi2=0.00)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,609 | INFO     | could have reported an average CPU frequency of 2552 MHz (10 samples)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,609 | INFO     | ..............................
[2025-10-12 17:36:34] 2025-10-12 21:35:44,609 | INFO     | . Timing measurements:
[2025-10-12 17:36:34] 2025-10-12 21:35:44,610 | INFO     | . get job = 0 s
[2025-10-12 17:36:34] 2025-10-12 21:35:44,610 | INFO     | . initial setup = 2 s
[2025-10-12 17:36:34] 2025-10-12 21:35:44,610 | INFO     | . payload setup = 4 s
[2025-10-12 17:36:34] 2025-10-12 21:35:44,610 | INFO     | . stage-in = 0 s
[2025-10-12 17:36:34] 2025-10-12 21:35:44,610 | INFO     | . payload execution = 11161 s
[2025-10-12 17:36:34] 2025-10-12 21:35:44,610 | INFO     | . stage-out = 2 s
[2025-10-12 17:36:34] 2025-10-12 21:35:44,611 | INFO     | . log creation = 0 s
[2025-10-12 17:36:34] 2025-10-12 21:35:44,611 | INFO     | ..............................
[2025-10-12 17:36:34] 2025-10-12 21:35:44,731 | INFO     | 
[2025-10-12 17:36:34] 2025-10-12 21:35:44,731 | INFO     | job summary report
[2025-10-12 17:36:34] 2025-10-12 21:35:44,731 | INFO     | --------------------------------------------------
[2025-10-12 17:36:34] 2025-10-12 21:35:44,732 | INFO     | PanDA job id: 6840182482
[2025-10-12 17:36:34] 2025-10-12 21:35:44,732 | INFO     | task id: 46676269
[2025-10-12 17:36:34] 2025-10-12 21:35:44,732 | INFO     | errors: (none)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:36:34] 2025-10-12 21:35:44,732 | INFO     | pilot state: finished 
[2025-10-12 17:36:34] 2025-10-12 21:35:44,733 | INFO     | transexitcode: 0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,733 | INFO     | exeerrorcode: 0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,733 | INFO     | exeerrordiag: 
[2025-10-12 17:36:34] 2025-10-12 21:35:44,733 | INFO     | exitcode: 0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,733 | INFO     | exitmsg: OK
[2025-10-12 17:36:34] 2025-10-12 21:35:44,733 | INFO     | cpuconsumptiontime: 84512 s
[2025-10-12 17:36:34] 2025-10-12 21:35:44,734 | INFO     | nevents: 400
[2025-10-12 17:36:34] 2025-10-12 21:35:44,734 | INFO     | neventsw: 0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,734 | INFO     | pid: 14877
[2025-10-12 17:36:34] 2025-10-12 21:35:44,734 | INFO     | pgrp: 14877
[2025-10-12 17:36:34] 2025-10-12 21:35:44,734 | INFO     | corecount: 8
[2025-10-12 17:36:34] 2025-10-12 21:35:44,734 | INFO     | event service: False
[2025-10-12 17:36:34] 2025-10-12 21:35:44,735 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 11: 2349175, 11169: 2378333, 11170: 2378332, 11173: 2387514, 11175: 2387570, 11180: 2387764}
[2025-10-12 17:36:34] 2025-10-12 21:35:44,735 | INFO     | --------------------------------------------------
[2025-10-12 17:36:34] 2025-10-12 21:35:44,735 | INFO     | 
[2025-10-12 17:36:34] 2025-10-12 21:35:44,735 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:36:34] 2025-10-12 21:35:44,742 | INFO     | time since job start (11195s) is within the limit (172800.0s)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,749 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:36:34] 2025-10-12 21:35:44,751 | INFO     | job 6840182482 has completed (purged errors)
[2025-10-12 17:36:34] 2025-10-12 21:35:44,752 | INFO     | overall cleanup function is called
[2025-10-12 17:36:34] 2025-10-12 21:35:45,759 | INFO     | --- collectZombieJob: --- 10, [14877]
[2025-10-12 17:36:34] 2025-10-12 21:35:45,759 | INFO     | zombie collector waiting for pid 14877
[2025-10-12 17:36:34] 2025-10-12 21:35:45,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:36:34] 2025-10-12 21:35:45,759 | INFO     | collected zombie processes
[2025-10-12 17:36:34] 2025-10-12 21:35:45,760 | INFO     | will attempt to kill all subprocesses of pid=14877
[2025-10-12 17:36:34] 2025-10-12 21:35:45,885 | INFO     | process IDs to be killed: [14877] (in reverse order)
[2025-10-12 17:36:34] 2025-10-12 21:35:45,922 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:36:34] 2025-10-12 21:35:45,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:36:34] 2025-10-12 21:35:45,928 | INFO     | did not find any defunct processes belonging to 14877
[2025-10-12 17:36:34] 2025-10-12 21:35:45,932 | INFO     | did not find any defunct processes belonging to 14877
[2025-10-12 17:36:34] 2025-10-12 21:35:45,933 | INFO     | ready for new job
[2025-10-12 17:36:34] 2025-10-12 21:35:45,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:36:34] 2025-10-12 21:35:45,935 | INFO     | ***************************************
[2025-10-12 17:36:34] 2025-10-12 21:35:45,935 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:36:34] 2025-10-12 21:35:45,935 | INFO     | ***************************************
[2025-10-12 17:36:34] 2025-10-12 21:35:45,935 | INFO     | 
[2025-10-12 17:36:34] 2025-10-12 21:35:45,936 | INFO     | architecture information:
[2025-10-12 17:36:34] 2025-10-12 21:35:45,937 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:36:34] 2025-10-12 21:35:45,949 | INFO     | cat /etc/os-release:
[2025-10-12 17:36:34] NAME="CentOS Linux"
[2025-10-12 17:36:34] VERSION="7 (Core)"
[2025-10-12 17:36:34] ID="centos"
[2025-10-12 17:36:34] ID_LIKE="rhel fedora"
[2025-10-12 17:36:34] VERSION_ID="7"
[2025-10-12 17:36:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:36:34] ANSI_COLOR="0;31"
[2025-10-12 17:36:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:36:34] HOME_URL="https://www.centos.org/"
[2025-10-12 17:36:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:36:34] 
[2025-10-12 17:36:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:36:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:36:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:36:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:36:34] 
[2025-10-12 17:36:34] 2025-10-12 21:35:45,949 | INFO     | ***************************************
[2025-10-12 17:36:34] 2025-10-12 21:35:46,452 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:36:34] 2025-10-12 21:35:46,469 | INFO     | sufficient remaining disk space (28096593920 B)
[2025-10-12 17:36:34] 2025-10-12 21:35:46,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:36:34] 2025-10-12 21:35:46,470 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:36:34] 2025-10-12 21:35:46,470 | INFO     | update_server=False
[2025-10-12 17:36:34] 2025-10-12 21:35:46,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:36:34] 2025-10-12 21:35:46,470 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 17:36:34] 2025-10-12 21:35:46,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:36:34] 2025-10-12 21:35:46,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:36:34] 2025-10-12 21:35:46,471 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:36:34] 2025-10-12 21:35:46,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:36:34] 2025-10-12 21:35:46,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:36:34] 2025-10-12 21:35:46,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:36:34] 2025-10-12 21:35:46,779 | INFO     | aborting loop
[2025-10-12 17:36:34] 2025-10-12 21:35:47,104 | INFO     | all data control threads have been joined
[2025-10-12 17:36:34] 2025-10-12 21:35:47,213 | INFO     | all job control threads have been joined
[2025-10-12 17:36:34] 2025-10-12 21:35:47,476 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:47,476 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:47,634 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:47,709 | INFO     | all payload control threads have been joined
[2025-10-12 17:36:34] 2025-10-12 21:35:47,784 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,109 | INFO     | [data] control thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,171 | INFO     | [job] validate thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,218 | INFO     | [job] control thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,477 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,480 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,531 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,546 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,636 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,710 | INFO     | [payload] control thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:48,719 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:35:49,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:36:34] 2025-10-12 21:35:53,943 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:36:34] 2025-10-12 21:36:27,079 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:36:34] 2025-10-12 21:36:29,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139917103019840)>', '<ExcThread(monitor, started 139916528834304)>']
[2025-10-12 17:36:34] 2025-10-12 21:36:29,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:36:34] 2025-10-12 21:36:29,687 | INFO     | [monitor] control thread has ended
[2025-10-12 17:36:34] 2025-10-12 21:36:34,098 | INFO     | all workflow threads have been joined
[2025-10-12 17:36:34] 2025-10-12 21:36:34,098 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:36:34] 2025-10-12 21:36:34,099 | INFO     | traces error code: 0
[2025-10-12 17:36:34] 2025-10-12 21:36:34,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:36:34] 2025-10-12 21:36:34,230 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:36:34] 2025-10-12 21:36:34,232 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:36:34] 2025-10-12 21:36:34,235 [wrapper] pilotpid: 7659
[2025-10-12 17:36:34] 2025-10-12 21:36:34,238 [wrapper] Pilot exit status: 0
[2025-10-12 17:36:34] 2025-10-12 21:36:34,246 [wrapper] pandaids: 6840182482
[2025-10-12 17:36:34] 2025-10-12 21:36:34,275 [wrapper] cleanup supervisor_pilot 24719 7660
[2025-10-12 17:36:34] 2025-10-12 21:36:34,280 [wrapper] Test setup, not cleaning
[2025-10-12 17:36:34] 2025-10-12 21:36:34,282 [wrapper] apfmon messages muted
[2025-10-12 17:36:34] 2025-10-12 21:36:34,284 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:36:34] 2025-10-12 21:36:34,286 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:36:34]  *** Error codes and diagnostics ***
[2025-10-12 17:36:34]     "exeErrorCode": 0,
[2025-10-12 17:36:34]     "exeErrorDiag": "",
[2025-10-12 17:36:34]     "pilotErrorCode": 0,
[2025-10-12 17:36:34]     "pilotErrorDiag": "",
[2025-10-12 17:36:34]  *** Listing of results directory ***
[2025-10-12 17:36:34] total 415780
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 17:36:34] -rwx------ 1 boincer umatlas     36292 Oct 12 10:50 runpilot2-wrapper.sh
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 10:50 queuedata.json
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:36:34] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:28 run_atlas
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:28 job.xml
[2025-10-12 17:36:34] -rw-r--r-- 2 boincer umatlas 223144979 Oct 12 14:28 EVNT.46676267._004538.pool.root.1
[2025-10-12 17:36:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:28 start_atlas.sh
[2025-10-12 17:36:34] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:28 shared
[2025-10-12 17:36:34] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 14:28 input.tar.gz
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:28 boinc_lockfile
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 14:28 pandaJob.out
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas    975528 Oct 12 14:29 agis_schedconf.cvmfs.json
[2025-10-12 17:36:34] drwx------ 5 boincer umatlas      4096 Oct 12 14:29 pilot3
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 17:31 init_data.xml
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas        95 Oct 12 17:34 pilot_heartbeat.json
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas 194694090 Oct 12 17:35 HITS.46676269._081327.pool.root.1
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas       530 Oct 12 17:35 boinc_task_state.xml
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas      1067 Oct 12 17:35 memory_monitor_summary.json
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas   1560580 Oct 12 17:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas    429501 Oct 12 17:35 log.46676269._081327.job.log.tgz.1
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas      7853 Oct 12 17:35 heartbeat.json
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:36 boinc_mmap_file
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas        28 Oct 12 17:36 wrapper_checkpoint.txt
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas      4552 Oct 12 17:36 pilotlog.txt
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas   1582131 Oct 12 17:36 log.46676269._081327.job.log.1
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas       357 Oct 12 17:36 output.list
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:36 runtime_log
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas   2027520 Oct 12 17:36 result.tar.gz
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas       660 Oct 12 17:36 y1PKDmWaCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxKkNDmS4oAJo.diag
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 17:36 runtime_log.err
[2025-10-12 17:36:34] -rw-r--r-- 1 boincer umatlas     20897 Oct 12 17:36 stderr.txt
[2025-10-12 17:36:34] HITS file was successfully produced:
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas 194694090 Oct 12 17:35 shared/HITS.pool.root.1
[2025-10-12 17:36:34]  *** Contents of shared directory: ***
[2025-10-12 17:36:34] total 410608
[2025-10-12 17:36:34] -rw-r--r-- 2 boincer umatlas 223144979 Oct 12 14:28 ATLAS.root_0
[2025-10-12 17:36:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:28 start_atlas.sh
[2025-10-12 17:36:34] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 14:28 input.tar.gz
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas 194694090 Oct 12 17:35 HITS.pool.root.1
[2025-10-12 17:36:34] -rw------- 1 boincer umatlas   2027520 Oct 12 17:36 result.tar.gz
17:36:35 (3870): run_atlas exited; CPU time 84665.077316
17:36:35 (3870): called boinc_finish(0)

</stderr_txt>
]]>

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