Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:12:15 (1544892): wrapper (7.7.26015): starting
17:12:15 (1544892): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:12:15] Arguments: --nthreads 8
[2025-10-12 17:12:15] Threads: 8
[2025-10-12 17:12:15] Checking for CVMFS
[2025-10-12 17:12:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:12:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:12:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:12:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:12:17] 2.13.2.0 5281 6201 112224 151636 3 331 34995154 40960000 12951 16776704 0 9594400 99.922 1910045 34896 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:12:17] CVMFS is ok
[2025-10-12 17:12:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:12:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:12:17] Further information can be found at the LHC@home message board.
[2025-10-12 17:12:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:12:17] Checking for apptainer binary...
[2025-10-12 17:12:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:12:17] Running /usr/bin/apptainer --version
[2025-10-12 17:12:17] apptainer version 1.4.3-1.el9
[2025-10-12 17:12:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:12:18] c-210-33-4.aglt2.org
[2025-10-12 17:12:18] apptainer works
[2025-10-12 17:12:18] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:12:18] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:12:18] Starting ATLAS job with PandaID=6839866792
[2025-10-12 17:12:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:37:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:37:20] 2025-10-13 01:36:41,257 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 21:37:20] 2025-10-13 01:36:41,260 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2599.777035714286
[2025-10-12 21:37:20] 2025-10-13 01:36:41,287 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6839866792/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,288 | INFO     | extracted standard info from prmon json
[2025-10-12 21:37:20] 2025-10-13 01:36:41,288 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:37:20] 2025-10-13 01:36:41,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:37:20] 2025-10-13 01:36:41,292 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:37:20] 2025-10-13 01:36:41,292 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:37:20] 2025-10-13 01:36:41,302 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:37:20] 2025-10-13 01:36:41,303 | INFO     | sum of square deviations: 5201764771.75
[2025-10-12 21:37:20] 2025-10-13 01:36:41,309 | INFO     | sum of deviations: 9606832619.3125
[2025-10-12 21:37:20] 2025-10-13 01:36:41,310 | INFO     | mean x: 1760311531.03125
[2025-10-12 21:37:20] 2025-10-13 01:36:41,310 | INFO     | mean y: 2529625.7109375
[2025-10-12 21:37:20] 2025-10-13 01:36:41,310 | INFO     | -- intersect: -3248485938.9113097
[2025-10-12 21:37:20] 2025-10-13 01:36:41,310 | INFO     | intersect: -3248485938.9113097
[2025-10-12 21:37:20] 2025-10-13 01:36:41,310 | INFO     | chi2: 3.4470515084234856
[2025-10-12 21:37:20] 2025-10-13 01:36:41,311 | INFO     | sum of square deviations: 4902898320.3107195
[2025-10-12 21:37:20] 2025-10-13 01:36:41,317 | INFO     | sum of deviations: 9744077727.968107
[2025-10-12 21:37:20] 2025-10-13 01:36:41,317 | INFO     | mean x: 1760311378.5418327
[2025-10-12 21:37:20] 2025-10-13 01:36:41,317 | INFO     | mean y: 2529695.764940239
[2025-10-12 21:37:20] 2025-10-13 01:36:41,317 | INFO     | -- intersect: -3495933820.5764036
[2025-10-12 21:37:20] 2025-10-13 01:36:41,317 | INFO     | intersect: -3495933820.5764036
[2025-10-12 21:37:20] 2025-10-13 01:36:41,318 | INFO     | chi2: 3.4485589018755936
[2025-10-12 21:37:20] 2025-10-13 01:36:41,318 | INFO     | current chi2=3.4485589018755936 (change=-0.04372993697437782 %)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,318 | INFO     | right removable region: 250
[2025-10-12 21:37:20] 2025-10-13 01:36:41,319 | INFO     | sum of square deviations: 4902846226.46215
[2025-10-12 21:37:20] 2025-10-13 01:36:41,325 | INFO     | sum of deviations: -59048467233.64938
[2025-10-12 21:37:20] 2025-10-13 01:36:41,325 | INFO     | mean x: 1760311683.5338645
[2025-10-12 21:37:20] 2025-10-13 01:36:41,325 | INFO     | mean y: 2564534.370517928
[2025-10-12 21:37:20] 2025-10-13 01:36:41,325 | INFO     | -- intersect: 21203251230.42552
[2025-10-12 21:37:20] 2025-10-13 01:36:41,325 | INFO     | intersect: 21203251230.42552
[2025-10-12 21:37:20] 2025-10-13 01:36:41,326 | INFO     | chi2: 0.5679006589986069
[2025-10-12 21:37:20] 2025-10-13 01:36:41,326 | INFO     | current chi2=0.5679006589986069 (change=83.52503124450446 %)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,326 | INFO     | sum of square deviations: 4615572062.508114
[2025-10-12 21:37:20] 2025-10-13 01:36:41,327 | INFO     | sum of deviations: -70050834556.9959
[2025-10-12 21:37:20] 2025-10-13 01:36:41,332 | INFO     | mean x: 1760311836.0447154
[2025-10-12 21:37:20] 2025-10-13 01:36:41,332 | INFO     | mean y: 2570345.2723577237
[2025-10-12 21:37:20] 2025-10-13 01:36:41,332 | INFO     | -- intersect: 26718936491.33191
[2025-10-12 21:37:20] 2025-10-13 01:36:41,332 | INFO     | intersect: 26718936491.33191
[2025-10-12 21:37:20] 2025-10-13 01:36:41,333 | INFO     | chi2: 0.4397618623743887
[2025-10-12 21:37:20] 2025-10-13 01:36:41,333 | INFO     | current chi2=0.4397618623743887 (change=22.56359357817412 %)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,333 | INFO     | left removable region: 20
[2025-10-12 21:37:20] 2025-10-13 01:36:41,333 | INFO     | sum of square deviations: 3772298589.72172
[2025-10-12 21:37:20] 2025-10-13 01:36:41,335 | INFO     | sum of deviations: -58347442464.77386
[2025-10-12 21:37:20] 2025-10-13 01:36:41,335 | INFO     | mean x: 1760311958.0347826
[2025-10-12 21:37:20] 2025-10-13 01:36:41,335 | INFO     | mean y: 2565553.2217391306
[2025-10-12 21:37:20] 2025-10-13 01:36:41,335 | INFO     | -- intersect: 27229917325.25226
[2025-10-12 21:37:20] 2025-10-13 01:36:41,335 | INFO     | intersect: 27229917325.25226
[2025-10-12 21:37:20] 2025-10-13 01:36:41,335 | INFO     | chi2: 0.40830818046628753
[2025-10-12 21:37:20] 2025-10-13 01:36:41,336 | INFO     | -- intersect: 27229917325.25226
[2025-10-12 21:37:20] 2025-10-13 01:36:41,340 | INFO     | current memory leak: -15.47 B/s (using 230 data points, chi2=0.41)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,341 | INFO     | could have reported an average CPU frequency of 2527 MHz (12 samples)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,341 | INFO     | ..............................
[2025-10-12 21:37:20] 2025-10-13 01:36:41,341 | INFO     | . Timing measurements:
[2025-10-12 21:37:20] 2025-10-13 01:36:41,341 | INFO     | . get job = 0 s
[2025-10-12 21:37:20] 2025-10-13 01:36:41,341 | INFO     | . initial setup = 3 s
[2025-10-12 21:37:20] 2025-10-13 01:36:41,341 | INFO     | . payload setup = 59 s
[2025-10-12 21:37:20] 2025-10-13 01:36:41,341 | INFO     | . stage-in = 0 s
[2025-10-12 21:37:20] 2025-10-13 01:36:41,341 | INFO     | . payload execution = 15644 s
[2025-10-12 21:37:20] 2025-10-13 01:36:41,341 | INFO     | . stage-out = 3 s
[2025-10-12 21:37:20] 2025-10-13 01:36:41,342 | INFO     | . log creation = 0 s
[2025-10-12 21:37:20] 2025-10-13 01:36:41,342 | INFO     | ..............................
[2025-10-12 21:37:20] 2025-10-13 01:36:41,487 | INFO     | time since job start (15836s) is within the limit (172800.0s)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,855 | INFO     | 
[2025-10-12 21:37:20] 2025-10-13 01:36:41,855 | INFO     | job summary report
[2025-10-12 21:37:20] 2025-10-13 01:36:41,855 | INFO     | --------------------------------------------------
[2025-10-12 21:37:20] 2025-10-13 01:36:41,855 | INFO     | PanDA job id: 6839866792
[2025-10-12 21:37:20] 2025-10-13 01:36:41,855 | INFO     | task id: 46676269
[2025-10-12 21:37:20] 2025-10-13 01:36:41,856 | INFO     | errors: (none)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | pilot state: finished 
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | transexitcode: 0
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | exeerrorcode: 0
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | exeerrordiag: 
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | exitcode: 0
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | exitmsg: OK
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | cpuconsumptiontime: 46627 s
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | nevents: 400
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | neventsw: 0
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | pid: 1557931
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | pgrp: 1557931
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | corecount: 8
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | event service: False
[2025-10-12 21:37:20] 2025-10-13 01:36:41,857 | INFO     | sizes: {0: 2348686, 1: 2348885, 13: 2348885, 23: 2348941, 35: 2348969, 42: 2349259, 46: 2349443, 15710: 2380764, 15711: 2380763, 15715: 2389817, 15716: 2389873, 15
[2025-10-12 21:37:20] 2025-10-13 01:36:41,858 | INFO     | --------------------------------------------------
[2025-10-12 21:37:20] 2025-10-13 01:36:41,858 | INFO     | 
[2025-10-12 21:37:20] 2025-10-13 01:36:41,858 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 21:37:20] 2025-10-13 01:36:41,912 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,914 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:37:20] 2025-10-13 01:36:41,915 | INFO     | job 6839866792 has completed (purged errors)
[2025-10-12 21:37:20] 2025-10-13 01:36:41,915 | INFO     | overall cleanup function is called
[2025-10-12 21:37:20] 2025-10-13 01:36:42,961 | INFO     | --- collectZombieJob: --- 10, [1557931]
[2025-10-12 21:37:20] 2025-10-13 01:36:42,961 | INFO     | zombie collector waiting for pid 1557931
[2025-10-12 21:37:20] 2025-10-13 01:36:42,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:37:20] 2025-10-13 01:36:42,961 | INFO     | collected zombie processes
[2025-10-12 21:37:20] 2025-10-13 01:36:42,961 | INFO     | will attempt to kill all subprocesses of pid=1557931
[2025-10-12 21:37:20] 2025-10-13 01:36:43,445 | INFO     | PID=1548580 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:37:20] 2025-10-13 01:36:43,445 | INFO     | .. there are 9 such processes running
[2025-10-12 21:37:20] 2025-10-13 01:36:43,843 | INFO     | process IDs to be killed: [1557931] (in reverse order)
[2025-10-12 21:37:20] 2025-10-13 01:36:44,143 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:37:20] 2025-10-13 01:36:44,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:37:20] 2025-10-13 01:36:44,160 | INFO     | did not find any defunct processes belonging to 1557931
[2025-10-12 21:37:20] 2025-10-13 01:36:44,183 | INFO     | did not find any defunct processes belonging to 1557931
[2025-10-12 21:37:20] 2025-10-13 01:36:44,184 | INFO     | ready for new job
[2025-10-12 21:37:20] 2025-10-13 01:36:44,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:37:20] 2025-10-13 01:36:44,191 | INFO     | ***************************************
[2025-10-12 21:37:20] 2025-10-13 01:36:44,191 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:37:20] 2025-10-13 01:36:44,191 | INFO     | ***************************************
[2025-10-12 21:37:20] 2025-10-13 01:36:44,191 | INFO     | 
[2025-10-12 21:37:20] 2025-10-13 01:36:44,200 | INFO     | architecture information:
[2025-10-12 21:37:20] 2025-10-13 01:36:44,202 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:37:20] 2025-10-13 01:36:44,252 | INFO     | cat /etc/os-release:
[2025-10-12 21:37:20] NAME="CentOS Linux"
[2025-10-12 21:37:20] VERSION="7 (Core)"
[2025-10-12 21:37:20] ID="centos"
[2025-10-12 21:37:20] ID_LIKE="rhel fedora"
[2025-10-12 21:37:20] VERSION_ID="7"
[2025-10-12 21:37:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:37:20] ANSI_COLOR="0;31"
[2025-10-12 21:37:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:37:20] HOME_URL="https://www.centos.org/"
[2025-10-12 21:37:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:37:20] 
[2025-10-12 21:37:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:37:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:37:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:37:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:37:20] 
[2025-10-12 21:37:20] 2025-10-13 01:36:44,252 | INFO     | ***************************************
[2025-10-12 21:37:20] 2025-10-13 01:36:44,758 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 21:37:20] 2025-10-13 01:36:44,834 | INFO     | sufficient remaining disk space (74210869248 B)
[2025-10-12 21:37:20] 2025-10-13 01:36:44,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:37:20] 2025-10-13 01:36:44,835 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:37:20] 2025-10-13 01:36:44,835 | INFO     | update_server=False
[2025-10-12 21:37:20] 2025-10-13 01:36:44,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:37:20] 2025-10-13 01:36:44,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:37:20] 2025-10-13 01:36:44,884 | INFO     | all data control threads have been joined
[2025-10-12 21:37:20] 2025-10-13 01:36:45,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:37:20] 2025-10-13 01:36:45,456 | INFO     | aborting loop
[2025-10-12 21:37:20] 2025-10-13 01:36:45,732 | INFO     | all payload control threads have been joined
[2025-10-12 21:37:20] 2025-10-13 01:36:45,840 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:45,890 | INFO     | [data] control thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,018 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,136 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,202 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,213 | INFO     | all job control threads have been joined
[2025-10-12 21:37:20] 2025-10-13 01:36:46,228 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,354 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,464 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,689 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,737 | INFO     | [payload] control thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:37:20] 2025-10-13 01:36:46,843 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:46,951 | INFO     | [job] validate thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:47,219 | INFO     | [job] control thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:47,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:47,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:37:20] 2025-10-13 01:36:47,851 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:36:51,569 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:37:20] 2025-10-13 01:37:13,178 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:37:20] 2025-10-13 01:37:14,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665125730112)>', '<ExcThread(monitor, started 139664551835392)>']
[2025-10-12 21:37:20] 2025-10-13 01:37:16,270 | INFO     | PID=1548580 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:37:20] 2025-10-13 01:37:16,270 | INFO     | .. there are 10 such processes running
[2025-10-12 21:37:20] 2025-10-13 01:37:16,270 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:37:20] 2025-10-13 01:37:16,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:37:20] 2025-10-13 01:37:16,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:37:20] 2025-10-13 01:37:16,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:37:20] 2025-10-13 01:37:16,270 | INFO     | [monitor] control thread has ended
[2025-10-12 21:37:20] 2025-10-13 01:37:19,284 | INFO     | all workflow threads have been joined
[2025-10-12 21:37:20] 2025-10-13 01:37:19,284 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:37:20] 2025-10-13 01:37:19,284 | INFO     | traces error code: 0
[2025-10-12 21:37:20] 2025-10-13 01:37:19,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:37:20] 2025-10-13 01:37:19,836 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:37:20] 2025-10-13 01:37:19,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:37:20] 2025-10-13 01:37:19,869 [wrapper] pilotpid: 1548580
[2025-10-12 21:37:20] 2025-10-13 01:37:19,886 [wrapper] Pilot exit status: 0
[2025-10-12 21:37:20] 2025-10-13 01:37:19,952 [wrapper] pandaids: 6839866792
[2025-10-12 21:37:20] 2025-10-13 01:37:20,065 [wrapper] cleanup supervisor_pilot 1885250 1548581
[2025-10-12 21:37:20] 2025-10-13 01:37:20,086 [wrapper] Test setup, not cleaning
[2025-10-12 21:37:20] 2025-10-13 01:37:20,101 [wrapper] apfmon messages muted
[2025-10-12 21:37:20] 2025-10-13 01:37:20,126 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:37:20] 2025-10-13 01:37:20,160 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:37:20]  *** Error codes and diagnostics ***
[2025-10-12 21:37:20]     "exeErrorCode": 0,
[2025-10-12 21:37:20]     "exeErrorDiag": "",
[2025-10-12 21:37:20]     "pilotErrorCode": 0,
[2025-10-12 21:37:20]     "pilotErrorDiag": "",
[2025-10-12 21:37:20]  *** Listing of results directory ***
[2025-10-12 21:37:20] total 410212
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 06:16 pilot3.tar.gz
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 06:24 queuedata.json
[2025-10-12 21:37:20] -rwx------. 1 boincer umatlas     36292 Oct 12 06:26 runpilot2-wrapper.sh
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:37:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:12 run_atlas
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:12 job.xml
[2025-10-12 21:37:20] -rw-r--r--. 2 boincer umatlas 220853892 Oct 12 17:12 EVNT.46676267._003623.pool.root.1
[2025-10-12 21:37:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:12 start_atlas.sh
[2025-10-12 21:37:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:12 shared
[2025-10-12 21:37:20] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 17:12 input.tar.gz
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:12 boinc_lockfile
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 17:12 pandaJob.out
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas    975536 Oct 12 17:12 agis_schedconf.cvmfs.json
[2025-10-12 21:37:20] drwx------. 5 boincer umatlas      4096 Oct 12 17:12 pilot3
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas 190201421 Oct 12 21:35 HITS.46676269._076111.pool.root.1
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas       531 Oct 12 21:35 boinc_task_state.xml
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas      1057 Oct 12 21:35 memory_monitor_summary.json
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas    489550 Oct 12 21:36 log.46676269._076111.job.log.tgz.1
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas        95 Oct 12 21:36 pilot_heartbeat.json
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas      7846 Oct 12 21:36 heartbeat.json
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 21:37 init_data.xml
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:37 boinc_mmap_file
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas        28 Oct 12 21:37 wrapper_checkpoint.txt
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas      4824 Oct 12 21:37 pilotlog.txt
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas   2059002 Oct 12 21:37 log.46676269._076111.job.log.1
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas       357 Oct 12 21:37 output.list
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:37 runtime_log
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas   2570240 Oct 12 21:37 result.tar.gz
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 21:37 runtime_log.err
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas       658 Oct 12 21:37 6swKDmqS8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYfTMDmbpKWem.diag
[2025-10-12 21:37:20] -rw-r--r--. 1 boincer umatlas     21300 Oct 12 21:37 stderr.txt
[2025-10-12 21:37:20] HITS file was successfully produced:
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas 190201421 Oct 12 21:35 shared/HITS.pool.root.1
[2025-10-12 21:37:20]  *** Contents of shared directory: ***
[2025-10-12 21:37:20] total 404516
[2025-10-12 21:37:20] -rw-r--r--. 2 boincer umatlas 220853892 Oct 12 17:12 ATLAS.root_0
[2025-10-12 21:37:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:12 start_atlas.sh
[2025-10-12 21:37:20] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 17:12 input.tar.gz
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas 190201421 Oct 12 21:35 HITS.pool.root.1
[2025-10-12 21:37:20] -rw-------. 1 boincer umatlas   2570240 Oct 12 21:37 result.tar.gz
21:37:22 (1544892): run_atlas exited; CPU time 47034.786005
21:37:22 (1544892): called boinc_finish(0)

</stderr_txt>
]]>

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