Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:01:14 (3684362): wrapper (7.7.26015): starting
10:01:14 (3684362): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 10:01:14] Arguments: --nthreads 2
[2025-10-13 10:01:14] Threads: 2
[2025-10-13 10:01:14] Checking for CVMFS
[2025-10-13 10:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:01:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:01:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:01:14] 2.9.2.0 2081766 7016 59976 151653 2 57 6288907 36864000 0 130560 0 4222183 99.988 239563 871 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 10:01:14] CVMFS is ok
[2025-10-13 10:01:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:01:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:01:14] Further information can be found at the LHC@home message board.
[2025-10-13 10:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:01:14] Checking for apptainer binary...
[2025-10-13 10:01:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:01:15] Running /usr/bin/apptainer --version
[2025-10-13 10:01:15] apptainer version 1.4.1-1.1
[2025-10-13 10:01:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:01:15] atlasA221
[2025-10-13 10:01:15] apptainer works
[2025-10-13 10:01:15] Set ATHENA_PROC_NUMBER=2
[2025-10-13 10:01:15] Set ATHENA_CORE_NUMBER=2
[2025-10-13 10:01:15] Starting ATLAS job with PandaID=6840223421
[2025-10-13 10:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:08:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:08:43] 2025-10-13 10:07:53,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:08:43] 2025-10-13 10:07:53,967 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:08:43] 2025-10-13 10:07:57,502 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:08:43] 2025-10-13 10:08:00,812 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:08:43] 2025-10-13 10:08:01,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:08:43] 2025-10-13 10:08:21,550 | INFO     | PID=3688066 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:08:43] 2025-10-13 10:08:21,550 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:08:43] 2025-10-13 10:08:21,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:08:43] 2025-10-13 10:08:21,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:08:43] 2025-10-13 10:08:37,430 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:08:43] 2025-10-13 10:08:38,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728180950848)>', '<ExcThread(monitor, started 139727525095168)>']
[2025-10-13 12:08:43] 2025-10-13 10:08:38,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:08:43] 2025-10-13 10:08:38,643 | INFO     | [monitor] control thread has ended
[2025-10-13 12:08:43] 2025-10-13 10:08:43,462 | INFO     | all workflow threads have been joined
[2025-10-13 12:08:43] 2025-10-13 10:08:43,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:08:43] 2025-10-13 10:08:43,463 | INFO     | traces error code: 0
[2025-10-13 12:08:43] 2025-10-13 10:08:43,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:08:43] 2025-10-13 10:08:43,519 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:08:43] 2025-10-13 10:08:43,521 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:08:43] 2025-10-13 10:08:43,524 [wrapper] pilotpid: 3688066
[2025-10-13 12:08:43] 2025-10-13 10:08:43,526 [wrapper] Pilot exit status: 0
[2025-10-13 12:08:43] 2025-10-13 10:08:43,532 [wrapper] pandaids: 6840223421
[2025-10-13 12:08:43] 2025-10-13 10:08:43,549 [wrapper] cleanup supervisor_pilot 3709487 3688067
[2025-10-13 12:08:43] 2025-10-13 10:08:43,551 [wrapper] Test setup, not cleaning
[2025-10-13 12:08:43] 2025-10-13 10:08:43,553 [wrapper] apfmon messages muted
[2025-10-13 12:08:43] 2025-10-13 10:08:43,555 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:08:43] 2025-10-13 10:08:43,557 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:08:43]  *** Error codes and diagnostics ***
[2025-10-13 12:08:43]     "exeErrorCode": 0,
[2025-10-13 12:08:43]     "exeErrorDiag": "",
[2025-10-13 12:08:43]     "pilotErrorCode": 0,
[2025-10-13 12:08:43]     "pilotErrorDiag": "",
[2025-10-13 12:08:43]  *** Listing of results directory ***
[2025-10-13 12:08:43] total 417356
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 12:08:43] -rwx------ 1 boinc boinc     36292 Oct 12 17:02 runpilot2-wrapper.sh
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc      5112 Oct 12 17:02 queuedata.json
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:08:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:01 run_atlas
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:01 job.xml
[2025-10-13 12:08:43] -rw-r--r-- 2 boinc boinc 221439667 Oct 13 10:01 EVNT.46676267._001880.pool.root.1
[2025-10-13 12:08:43] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:01 shared
[2025-10-13 12:08:43] -rw-r--r-- 2 boinc boinc    569680 Oct 13 10:01 input.tar.gz
[2025-10-13 12:08:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:01 start_atlas.sh
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:01 boinc_setup_complete
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc      6285 Oct 13 10:01 init_data.xml
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:01 boinc_lockfile
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:01 pandaJob.out
[2025-10-13 12:08:43] -rw------- 1 boinc boinc    972849 Oct 13 10:01 agis_schedconf.cvmfs.json
[2025-10-13 12:08:43] -rw------- 1 boinc boinc   1560580 Oct 13 10:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:08:43] drwx------ 5 boinc boinc      4096 Oct 13 10:01 pilot3
[2025-10-13 12:08:43] -rw------- 1 boinc boinc 199311697 Oct 13 12:07 HITS.46676269._081530.pool.root.1
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:07 boinc_task_state.xml
[2025-10-13 12:08:43] -rw------- 1 boinc boinc      1016 Oct 13 12:07 memory_monitor_summary.json
[2025-10-13 12:08:43] -rw------- 1 boinc boinc    272888 Oct 13 12:07 log.46676269._081530.job.log.tgz.1
[2025-10-13 12:08:43] -rw------- 1 boinc boinc      7758 Oct 13 12:07 heartbeat.json
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:08 boinc_mmap_file
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:08 wrapper_checkpoint.txt
[2025-10-13 12:08:43] -rw------- 1 boinc boinc        95 Oct 13 12:08 pilot_heartbeat.json
[2025-10-13 12:08:43] -rw------- 1 boinc boinc      5010 Oct 13 12:08 pilotlog.txt
[2025-10-13 12:08:43] -rw------- 1 boinc boinc   1094432 Oct 13 12:08 log.46676269._081530.job.log.1
[2025-10-13 12:08:43] -rw------- 1 boinc boinc       357 Oct 13 12:08 output.list
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:08 runtime_log
[2025-10-13 12:08:43] -rw------- 1 boinc boinc   1382400 Oct 13 12:08 result.tar.gz
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc      8792 Oct 13 12:08 runtime_log.err
[2025-10-13 12:08:43] -rw------- 1 boinc boinc       662 Oct 13 12:08 ZnvLDmSlCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaMkNDmdUFdDo.diag
[2025-10-13 12:08:43] -rw-r--r-- 1 boinc boinc      5244 Oct 13 12:08 stderr.txt
[2025-10-13 12:08:43] HITS file was successfully produced:
[2025-10-13 12:08:43] -rw------- 1 boinc boinc 199311697 Oct 13 12:07 shared/HITS.pool.root.1
[2025-10-13 12:08:43]  *** Contents of shared directory: ***
[2025-10-13 12:08:43] total 412832
[2025-10-13 12:08:43] -rw-r--r-- 2 boinc boinc 221439667 Oct 13 10:01 ATLAS.root_0
[2025-10-13 12:08:43] -rw-r--r-- 2 boinc boinc    569680 Oct 13 10:01 input.tar.gz
[2025-10-13 12:08:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:01 start_atlas.sh
[2025-10-13 12:08:43] -rw------- 1 boinc boinc 199311697 Oct 13 12:07 HITS.pool.root.1
[2025-10-13 12:08:43] -rw------- 1 boinc boinc   1382400 Oct 13 12:08 result.tar.gz
12:08:45 (3684362): run_atlas exited; CPU time 14789.386604
12:08:45 (3684362): called boinc_finish(0)

</stderr_txt>
]]>

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