Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:56:18 (2366620): wrapper (7.7.26015): starting
05:56:18 (2366620): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 05:56:18] Arguments: --nthreads 2
[2025-10-13 05:56:18] Threads: 2
[2025-10-13 05:56:18] Checking for CVMFS
[2025-10-13 05:56:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:56:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:56:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:56:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:56:18] 2.9.2.0 1188606 5142 63500 151647 0 57 34554278 36864001 0 130560 0 3099139 99.988 176940 707 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 05:56:18] CVMFS is ok
[2025-10-13 05:56:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:56:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:56:18] Further information can be found at the LHC@home message board.
[2025-10-13 05:56:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:56:18] Checking for apptainer binary...
[2025-10-13 05:56:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:56:18] Running /usr/bin/apptainer --version
[2025-10-13 05:56:18] apptainer version 1.4.1-1.1
[2025-10-13 05:56:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:56:18] magicA244
[2025-10-13 05:56:18] apptainer works
[2025-10-13 05:56:18] Set ATHENA_PROC_NUMBER=2
[2025-10-13 05:56:18] Set ATHENA_CORE_NUMBER=2
[2025-10-13 05:56:18] Starting ATLAS job with PandaID=6839989686
[2025-10-13 05:56:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:06:54]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:06:54] 2025-10-13 06:06:37,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:06:54] 2025-10-13 06:06:37,897 | INFO     | aborting loop
[2025-10-13 08:06:54] 2025-10-13 06:06:37,897 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 08:06:54] 2025-10-13 06:06:37,897 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:06:54] 2025-10-13 06:06:37,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:06:54] 2025-10-13 06:06:37,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:06:54] 2025-10-13 06:06:38,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:06:54] 2025-10-13 06:06:38,085 | INFO     | all data control threads have been joined
[2025-10-13 08:06:54] 2025-10-13 06:06:38,902 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:38,903 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:38,904 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:38,991 | INFO     | all job control threads have been joined
[2025-10-13 08:06:54] 2025-10-13 06:06:39,090 | INFO     | [data] control thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:39,099 | INFO     | [job] validate thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:39,130 | INFO     | all payload control threads have been joined
[2025-10-13 08:06:54] 2025-10-13 06:06:39,421 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:39,460 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:39,705 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:39,753 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:39,855 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:39,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:06:54] 2025-10-13 06:06:39,997 | INFO     | [job] control thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:40,044 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:40,131 | INFO     | [payload] control thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:40,478 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:43,081 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:06:54] 2025-10-13 06:06:43,925 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:48,086 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:06:54] 2025-10-13 06:06:49,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:06:54] 2025-10-13 06:06:49,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558246467392)>', '<ExcThread(monitor, started 140557619812096)>']
[2025-10-13 08:06:54] 2025-10-13 06:06:49,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:06:54] 2025-10-13 06:06:49,961 | INFO     | [monitor] control thread has ended
[2025-10-13 08:06:54] 2025-10-13 06:06:54,215 | INFO     | all workflow threads have been joined
[2025-10-13 08:06:54] 2025-10-13 06:06:54,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:06:54] 2025-10-13 06:06:54,215 | INFO     | traces error code: 0
[2025-10-13 08:06:54] 2025-10-13 06:06:54,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:06:54] 2025-10-13 06:06:54,258 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:06:54] 2025-10-13 06:06:54,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:06:54] 2025-10-13 06:06:54,263 [wrapper] pilotpid: 2370325
[2025-10-13 08:06:54] 2025-10-13 06:06:54,265 [wrapper] Pilot exit status: 0
[2025-10-13 08:06:54] 2025-10-13 06:06:54,271 [wrapper] pandaids: 6839989686
[2025-10-13 08:06:54] 2025-10-13 06:06:54,283 [wrapper] cleanup supervisor_pilot 2390786 2370326
[2025-10-13 08:06:54] 2025-10-13 06:06:54,285 [wrapper] Test setup, not cleaning
[2025-10-13 08:06:54] 2025-10-13 06:06:54,287 [wrapper] apfmon messages muted
[2025-10-13 08:06:54] 2025-10-13 06:06:54,289 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:06:54] 2025-10-13 06:06:54,291 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:06:54]  *** Error codes and diagnostics ***
[2025-10-13 08:06:54]     "exeErrorCode": 0,
[2025-10-13 08:06:54]     "exeErrorDiag": "",
[2025-10-13 08:06:54]     "pilotErrorCode": 0,
[2025-10-13 08:06:54]     "pilotErrorDiag": "",
[2025-10-13 08:06:54]  *** Listing of results directory ***
[2025-10-13 08:06:54] total 419616
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 08:06:54] -rwx------ 1 boinc boinc     36292 Oct 12 15:03 runpilot2-wrapper.sh
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:03 queuedata.json
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:06:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:56 run_atlas
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:56 job.xml
[2025-10-13 08:06:54] -rw-r--r-- 2 boinc boinc 221739375 Oct 13 05:56 EVNT.46676267._003845.pool.root.1
[2025-10-13 08:06:54] -rw-r--r-- 2 boinc boinc    569680 Oct 13 05:56 input.tar.gz
[2025-10-13 08:06:54] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:56 start_atlas.sh
[2025-10-13 08:06:54] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:56 shared
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:56 boinc_setup_complete
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc      6209 Oct 13 05:56 init_data.xml
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:56 boinc_lockfile
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:56 pandaJob.out
[2025-10-13 08:06:54] -rw------- 1 boinc boinc    974373 Oct 13 05:56 agis_schedconf.cvmfs.json
[2025-10-13 08:06:54] -rw------- 1 boinc boinc   1560580 Oct 13 05:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:06:54] drwx------ 5 boinc boinc      4096 Oct 13 05:56 pilot3
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc       529 Oct 13 08:06 boinc_task_state.xml
[2025-10-13 08:06:54] -rw------- 1 boinc boinc 201254072 Oct 13 08:06 HITS.46676269._079018.pool.root.1
[2025-10-13 08:06:54] -rw------- 1 boinc boinc        95 Oct 13 08:06 pilot_heartbeat.json
[2025-10-13 08:06:54] -rw------- 1 boinc boinc      1017 Oct 13 08:06 memory_monitor_summary.json
[2025-10-13 08:06:54] -rw------- 1 boinc boinc    281803 Oct 13 08:06 log.46676269._079018.job.log.tgz.1
[2025-10-13 08:06:54] -rw------- 1 boinc boinc      7754 Oct 13 08:06 heartbeat.json
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:06 boinc_mmap_file
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc        27 Oct 13 08:06 wrapper_checkpoint.txt
[2025-10-13 08:06:54] -rw------- 1 boinc boinc      4628 Oct 13 08:06 pilotlog.txt
[2025-10-13 08:06:54] -rw------- 1 boinc boinc   1125791 Oct 13 08:06 log.46676269._079018.job.log.1
[2025-10-13 08:06:54] -rw------- 1 boinc boinc       357 Oct 13 08:06 output.list
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:06 runtime_log
[2025-10-13 08:06:54] -rw------- 1 boinc boinc   1423360 Oct 13 08:06 result.tar.gz
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc      8792 Oct 13 08:06 runtime_log.err
[2025-10-13 08:06:54] -rw------- 1 boinc boinc       662 Oct 13 08:06 aYtNDmvuAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHwjNDm24s1Om.diag
[2025-10-13 08:06:54] -rw-r--r-- 1 boinc boinc      7084 Oct 13 08:06 stderr.txt
[2025-10-13 08:06:54] HITS file was successfully produced:
[2025-10-13 08:06:54] -rw------- 1 boinc boinc 201254072 Oct 13 08:06 shared/HITS.pool.root.1
[2025-10-13 08:06:54]  *** Contents of shared directory: ***
[2025-10-13 08:06:54] total 415056
[2025-10-13 08:06:54] -rw-r--r-- 2 boinc boinc 221739375 Oct 13 05:56 ATLAS.root_0
[2025-10-13 08:06:54] -rw-r--r-- 2 boinc boinc    569680 Oct 13 05:56 input.tar.gz
[2025-10-13 08:06:54] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:56 start_atlas.sh
[2025-10-13 08:06:54] -rw------- 1 boinc boinc 201254072 Oct 13 08:06 HITS.pool.root.1
[2025-10-13 08:06:54] -rw------- 1 boinc boinc   1423360 Oct 13 08:06 result.tar.gz
08:06:56 (2366620): run_atlas exited; CPU time 15183.490378
08:06:56 (2366620): called boinc_finish(0)

</stderr_txt>
]]>

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