Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:23:21 (27147): wrapper (7.7.26015): starting
05:23:21 (27147): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:23:22] Arguments: --nthreads 8
[2025-10-13 05:23:22] Threads: 8
[2025-10-13 05:23:22] Checking for CVMFS
[2025-10-13 05:23:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:23:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:23:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:23:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:23:25] 2.11.2.0 347 221265 142672 151647 2 60 22116858 25165825 4632 130560 0 115629129 99.885 67160382 3551 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 05:23:25] CVMFS is ok
[2025-10-13 05:23:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:23:25] Checking for apptainer binary...
[2025-10-13 05:23:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:23:25] Running /usr/bin/apptainer --version
[2025-10-13 05:23:25] apptainer version 1.3.2-1.el7
[2025-10-13 05:23:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:23:36] cg-vwn289.simple-grid.lan
[2025-10-13 05:23:36] apptainer works
[2025-10-13 05:23:36] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:23:36] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:23:36] Starting ATLAS job with PandaID=6840181964
[2025-10-13 05:23:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:36:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:36:58] 2025-10-13 07:35:51,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:36:58] 2025-10-13 07:35:51,256 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:36:58] 2025-10-13 07:35:51,261 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:36:58] 2025-10-13 07:35:51,261 | INFO     | sum of square deviations: 4024149870.0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,263 | INFO     | sum of deviations: 70261654400.00002
[2025-10-13 09:36:58] 2025-10-13 07:35:51,264 | INFO     | mean x: 1760333651.0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,264 | INFO     | mean y: 2445401.059574468
[2025-10-13 09:36:58] 2025-10-13 07:35:51,264 | INFO     | -- intersect: -30732979126.072224
[2025-10-13 09:36:58] 2025-10-13 07:35:51,264 | INFO     | intersect: -30732979126.072224
[2025-10-13 09:36:58] 2025-10-13 07:35:51,265 | INFO     | chi2: 7.052013020385472
[2025-10-13 09:36:58] 2025-10-13 07:35:51,265 | INFO     | sum of square deviations: 3772712597.5
[2025-10-13 09:36:58] 2025-10-13 07:35:51,267 | INFO     | sum of deviations: 84982884501.0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,267 | INFO     | mean x: 1760333498.5
[2025-10-13 09:36:58] 2025-10-13 07:35:51,267 | INFO     | mean y: 2454158.9913043478
[2025-10-13 09:36:58] 2025-10-13 07:35:51,267 | INFO     | -- intersect: -39650239896.04975
[2025-10-13 09:36:58] 2025-10-13 07:35:51,267 | INFO     | intersect: -39650239896.04975
[2025-10-13 09:36:58] 2025-10-13 07:35:51,267 | INFO     | chi2: 6.271420439481379
[2025-10-13 09:36:58] 2025-10-13 07:35:51,268 | INFO     | current chi2=6.271420439481379 (change=11.069074584060031 %)
[2025-10-13 09:36:58] 2025-10-13 07:35:51,268 | INFO     | right removable region: 229
[2025-10-13 09:36:58] 2025-10-13 07:35:51,268 | INFO     | sum of square deviations: 3772712597.5
[2025-10-13 09:36:58] 2025-10-13 07:35:51,270 | INFO     | sum of deviations: -10282468446.5
[2025-10-13 09:36:58] 2025-10-13 07:35:51,270 | INFO     | mean x: 1760333803.5
[2025-10-13 09:36:58] 2025-10-13 07:35:51,270 | INFO     | mean y: 2494210.856521739
[2025-10-13 09:36:58] 2025-10-13 07:35:51,270 | INFO     | -- intersect: 4800256118.771396
[2025-10-13 09:36:58] 2025-10-13 07:35:51,270 | INFO     | intersect: 4800256118.771396
[2025-10-13 09:36:58] 2025-10-13 07:35:51,271 | INFO     | chi2: 2.3250308384782774
[2025-10-13 09:36:58] 2025-10-13 07:35:51,271 | INFO     | current chi2=2.3250308384782774 (change=67.03025318079762 %)
[2025-10-13 09:36:58] 2025-10-13 07:35:51,271 | INFO     | sum of square deviations: 3531973200.0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,273 | INFO     | sum of deviations: -47960891990.999985
[2025-10-13 09:36:58] 2025-10-13 07:35:51,273 | INFO     | mean x: 1760333956.0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,273 | INFO     | mean y: 2517920.2933333335
[2025-10-13 09:36:58] 2025-10-13 07:35:51,273 | INFO     | -- intersect: 23906206298.168262
[2025-10-13 09:36:58] 2025-10-13 07:35:51,274 | INFO     | intersect: 23906206298.168262
[2025-10-13 09:36:58] 2025-10-13 07:35:51,274 | INFO     | chi2: 1.0462807828275973
[2025-10-13 09:36:58] 2025-10-13 07:35:51,274 | INFO     | current chi2=1.0462807828275973 (change=54.999272890832565 %)
[2025-10-13 09:36:58] 2025-10-13 07:35:51,274 | INFO     | sum of square deviations: 3301699115.0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,276 | INFO     | sum of deviations: -45743540039.0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,276 | INFO     | mean x: 1760334108.5
[2025-10-13 09:36:58] 2025-10-13 07:35:51,277 | INFO     | mean y: 2516416.5727272728
[2025-10-13 09:36:58] 2025-10-13 07:35:51,277 | INFO     | -- intersect: 24391145110.313377
[2025-10-13 09:36:58] 2025-10-13 07:35:51,277 | INFO     | intersect: 24391145110.313377
[2025-10-13 09:36:58] 2025-10-13 07:35:51,277 | INFO     | chi2: 1.032396379711805
[2025-10-13 09:36:58] 2025-10-13 07:35:51,277 | INFO     | current chi2=1.032396379711805 (change=1.327024575398336 %)
[2025-10-13 09:36:58] 2025-10-13 07:35:51,277 | INFO     | left removable region: 30
[2025-10-13 09:36:58] 2025-10-13 07:35:51,278 | INFO     | sum of square deviations: 2443580700.0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,279 | INFO     | sum of deviations: -7914531071.000006
[2025-10-13 09:36:58] 2025-10-13 07:35:51,279 | INFO     | mean x: 1760334383.0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,280 | INFO     | mean y: 2510928.0653266334
[2025-10-13 09:36:58] 2025-10-13 07:35:51,280 | INFO     | -- intersect: 5704070598.103286
[2025-10-13 09:36:58] 2025-10-13 07:35:51,280 | INFO     | intersect: 5704070598.103286
[2025-10-13 09:36:58] 2025-10-13 07:35:51,280 | INFO     | chi2: 0.08345136897616612
[2025-10-13 09:36:58] 2025-10-13 07:35:51,280 | INFO     | -- intersect: 5704070598.103286
[2025-10-13 09:36:58] 2025-10-13 07:35:51,280 | INFO     | current memory leak: -3.24 B/s (using 199 data points, chi2=0.08)
[2025-10-13 09:36:58] 2025-10-13 07:35:51,281 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 09:36:58] 2025-10-13 07:35:51,281 | INFO     | ..............................
[2025-10-13 09:36:58] 2025-10-13 07:35:51,281 | INFO     | . Timing measurements:
[2025-10-13 09:36:58] 2025-10-13 07:35:51,281 | INFO     | . get job = 0 s
[2025-10-13 09:36:58] 2025-10-13 07:35:51,282 | INFO     | . initial setup = 9 s
[2025-10-13 09:36:58] 2025-10-13 07:35:51,282 | INFO     | . payload setup = 122 s
[2025-10-13 09:36:58] 2025-10-13 07:35:51,282 | INFO     | . stage-in = 0 s
[2025-10-13 09:36:58] 2025-10-13 07:35:51,282 | INFO     | . payload execution = 14489 s
[2025-10-13 09:36:58] 2025-10-13 07:35:51,282 | INFO     | . stage-out = 5 s
[2025-10-13 09:36:58] 2025-10-13 07:35:51,282 | INFO     | . log creation = 1 s
[2025-10-13 09:36:58] 2025-10-13 07:35:51,282 | INFO     | ..............................
[2025-10-13 09:36:58] 2025-10-13 07:35:51,417 | INFO     | 
[2025-10-13 09:36:58] 2025-10-13 07:35:51,417 | INFO     | job summary report
[2025-10-13 09:36:58] 2025-10-13 07:35:51,417 | INFO     | --------------------------------------------------
[2025-10-13 09:36:58] 2025-10-13 07:35:51,417 | INFO     | PanDA job id: 6840181964
[2025-10-13 09:36:58] 2025-10-13 07:35:51,417 | INFO     | task id: 46676269
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | errors: (none)
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | pilot state: finished 
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | transexitcode: 0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | exeerrorcode: 0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | exeerrordiag: 
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | exitcode: 0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | exitmsg: OK
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | cpuconsumptiontime: 53882 s
[2025-10-13 09:36:58] 2025-10-13 07:35:51,418 | INFO     | nevents: 400
[2025-10-13 09:36:58] 2025-10-13 07:35:51,419 | INFO     | neventsw: 0
[2025-10-13 09:36:58] 2025-10-13 07:35:51,419 | INFO     | pid: 5118
[2025-10-13 09:36:58] 2025-10-13 07:35:51,419 | INFO     | pgrp: 5118
[2025-10-13 09:36:58] 2025-10-13 07:35:51,419 | INFO     | corecount: 8
[2025-10-13 09:36:58] 2025-10-13 07:35:51,419 | INFO     | event service: False
[2025-10-13 09:36:58] 2025-10-13 07:35:51,419 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 13: 2348913, 23: 2348969, 34: 2348997, 45: 2349153, 56: 2349181, 66: 2349209, 77: 2349237, 88: 2349293, 94: 2349863, 98
[2025-10-13 09:36:58] 2025-10-13 07:35:51,419 | INFO     | --------------------------------------------------
[2025-10-13 09:36:58] 2025-10-13 07:35:51,419 | INFO     | 
[2025-10-13 09:36:58] 2025-10-13 07:35:51,419 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 09:36:58] 2025-10-13 07:35:51,867 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,868 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,868 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,870 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,870 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:36:58] 2025-10-13 07:35:51,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,870 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:36:58] 2025-10-13 07:35:51,870 | INFO     | job 6840181964 has completed (purged errors)
[2025-10-13 09:36:58] 2025-10-13 07:35:51,870 | INFO     | overall cleanup function is called
[2025-10-13 09:36:58] 2025-10-13 07:35:52,880 | INFO     | --- collectZombieJob: --- 10, [5118]
[2025-10-13 09:36:58] 2025-10-13 07:35:52,880 | INFO     | zombie collector waiting for pid 5118
[2025-10-13 09:36:58] 2025-10-13 07:35:52,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:36:58] 2025-10-13 07:35:52,880 | INFO     | collected zombie processes
[2025-10-13 09:36:58] 2025-10-13 07:35:52,880 | INFO     | will attempt to kill all subprocesses of pid=5118
[2025-10-13 09:36:58] 2025-10-13 07:35:52,991 | INFO     | process IDs to be killed: [5118] (in reverse order)
[2025-10-13 09:36:58] 2025-10-13 07:35:53,227 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:36:58] 2025-10-13 07:35:53,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:36:58] 2025-10-13 07:35:53,230 | INFO     | did not find any defunct processes belonging to 5118
[2025-10-13 09:36:58] 2025-10-13 07:35:53,233 | INFO     | did not find any defunct processes belonging to 5118
[2025-10-13 09:36:58] 2025-10-13 07:35:53,234 | INFO     | ready for new job
[2025-10-13 09:36:58] 2025-10-13 07:35:53,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:36:58] 2025-10-13 07:35:53,236 | INFO     | ***************************************
[2025-10-13 09:36:58] 2025-10-13 07:35:53,236 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:36:58] 2025-10-13 07:35:53,236 | INFO     | ***************************************
[2025-10-13 09:36:58] 2025-10-13 07:35:53,236 | INFO     | 
[2025-10-13 09:36:58] 2025-10-13 07:35:53,237 | INFO     | pilot is running in a VM
[2025-10-13 09:36:58] 2025-10-13 07:35:53,237 | INFO     | architecture information:
[2025-10-13 09:36:58] 2025-10-13 07:35:53,238 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:36:58] 2025-10-13 07:35:53,528 | INFO     | cat /etc/os-release:
[2025-10-13 09:36:58] NAME="CentOS Linux"
[2025-10-13 09:36:58] VERSION="7 (Core)"
[2025-10-13 09:36:58] ID="centos"
[2025-10-13 09:36:58] ID_LIKE="rhel fedora"
[2025-10-13 09:36:58] VERSION_ID="7"
[2025-10-13 09:36:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:36:58] ANSI_COLOR="0;31"
[2025-10-13 09:36:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:36:58] HOME_URL="https://www.centos.org/"
[2025-10-13 09:36:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:36:58] 
[2025-10-13 09:36:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:36:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:36:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:36:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:36:58] 
[2025-10-13 09:36:58] 2025-10-13 07:35:53,529 | INFO     | ***************************************
[2025-10-13 09:36:58] 2025-10-13 07:35:54,032 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 09:36:58] 2025-10-13 07:35:54,378 | INFO     | sufficient remaining disk space (495809724416 B)
[2025-10-13 09:36:58] 2025-10-13 07:35:54,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:36:58] 2025-10-13 07:35:54,379 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:36:58] 2025-10-13 07:35:54,379 | INFO     | update_server=False
[2025-10-13 09:36:58] 2025-10-13 07:35:54,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:36:58] 2025-10-13 07:35:54,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:36:58] 2025-10-13 07:35:54,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:36:58] 2025-10-13 07:35:54,981 | INFO     | aborting loop
[2025-10-13 09:36:58] 2025-10-13 07:35:55,150 | INFO     | all payload control threads have been joined
[2025-10-13 09:36:58] 2025-10-13 07:35:55,361 | INFO     | all job control threads have been joined
[2025-10-13 09:36:58] 2025-10-13 07:35:55,388 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:55,401 | INFO     | all data control threads have been joined
[2025-10-13 09:36:58] 2025-10-13 07:35:55,448 | INFO     | [job] validate thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:55,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:55,660 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:55,987 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,072 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,123 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,157 | INFO     | [payload] control thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,200 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,367 | INFO     | [job] control thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,388 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,407 | INFO     | [data] control thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:36:58] 2025-10-13 07:35:56,790 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,876 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:35:56,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:36:58] 2025-10-13 07:35:57,438 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:36:00,900 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:36:58] 2025-10-13 07:36:23,864 | INFO     | PID=30964 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 09:36:58] 2025-10-13 07:36:23,864 | INFO     | .. there are 9 such processes running
[2025-10-13 09:36:58] 2025-10-13 07:36:23,865 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:36:58] 2025-10-13 07:36:23,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:36:58] 2025-10-13 07:36:23,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:36:58] 2025-10-13 07:36:48,970 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:36:58] 2025-10-13 07:36:49,228 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971844261696)>', '<ExcThread(monitor, started 139971398706944)>']
[2025-10-13 09:36:58] 2025-10-13 07:36:50,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:36:58] 2025-10-13 07:36:50,018 | INFO     | [monitor] control thread has ended
[2025-10-13 09:36:58] 2025-10-13 07:36:54,254 | INFO     | all workflow threads have been joined
[2025-10-13 09:36:58] 2025-10-13 07:36:54,254 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:36:58] 2025-10-13 07:36:54,254 | INFO     | traces error code: 0
[2025-10-13 09:36:58] 2025-10-13 07:36:54,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:36:58] 2025-10-13 07:36:54,576 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:36:58] 2025-10-13 07:36:54,639 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:36:58] 2025-10-13 07:36:54,674 [wrapper] pilotpid: 30964
[2025-10-13 09:36:58] 2025-10-13 07:36:54,711 [wrapper] Pilot exit status: 0
[2025-10-13 09:36:58] 2025-10-13 07:36:55,012 [wrapper] pandaids: 6840181964
[2025-10-13 09:36:58] 2025-10-13 07:36:55,915 [wrapper] cleanup supervisor_pilot 14790 30965
[2025-10-13 09:36:58] 2025-10-13 07:36:55,989 [wrapper] Test setup, not cleaning
[2025-10-13 09:36:58] 2025-10-13 07:36:56,078 [wrapper] apfmon messages muted
[2025-10-13 09:36:58] 2025-10-13 07:36:56,134 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:36:58] 2025-10-13 07:36:56,230 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:36:58]  *** Error codes and diagnostics ***
[2025-10-13 09:36:58]     "exeErrorCode": 0,
[2025-10-13 09:36:58]     "exeErrorDiag": "",
[2025-10-13 09:36:58]     "pilotErrorCode": 0,
[2025-10-13 09:36:58]     "pilotErrorDiag": "",
[2025-10-13 09:36:58]  *** Listing of results directory ***
[2025-10-13 09:36:58] total 411688
[2025-10-13 09:36:58] -rwx------. 1 boinc boinc     36292 Oct 12 16:30 runpilot2-wrapper.sh
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc      5112 Oct 12 16:30 queuedata.json
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc       100 Oct 13 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:36:58] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 05:23 run_atlas
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc       105 Oct 13 05:23 job.xml
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc      6389 Oct 13 05:23 init_data.xml
[2025-10-13 09:36:58] -rw-r--r--. 2 boinc boinc 220185163 Oct 13 05:23 EVNT.46676267._004244.pool.root.1
[2025-10-13 09:36:58] -rw-r--r--. 2 boinc boinc     15120 Oct 13 05:23 start_atlas.sh
[2025-10-13 09:36:58] drwxrwx--x. 2 boinc boinc        68 Oct 13 05:23 shared
[2025-10-13 09:36:58] -rw-r--r--. 2 boinc boinc    569678 Oct 13 05:23 input.tar.gz
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc         0 Oct 13 05:23 boinc_lockfile
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc      2550 Oct 13 05:23 pandaJob.out
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc    974373 Oct 13 05:27 agis_schedconf.cvmfs.json
[2025-10-13 09:36:58] drwx------. 5 boinc boinc      4096 Oct 13 05:27 pilot3
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc 192578740 Oct 13 09:32 HITS.46676269._080829.pool.root.1
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc       531 Oct 13 09:33 boinc_task_state.xml
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc      1016 Oct 13 09:34 memory_monitor_summary.json
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc   1560580 Oct 13 09:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc    470594 Oct 13 09:34 log.46676269._080829.job.log.tgz.1
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc      7783 Oct 13 09:35 heartbeat.json
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc        95 Oct 13 09:36 pilot_heartbeat.json
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc      4884 Oct 13 09:36 pilotlog.txt
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc      8192 Oct 13 09:36 boinc_mmap_file
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc        28 Oct 13 09:36 wrapper_checkpoint.txt
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc   1990133 Oct 13 09:36 log.46676269._080829.job.log.1
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc       357 Oct 13 09:36 output.list
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc       620 Oct 13 09:36 runtime_log
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc   2478080 Oct 13 09:36 result.tar.gz
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc      8703 Oct 13 09:36 runtime_log.err
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc       656 Oct 13 09:36 821LDmQGCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmO6TMDmSni6fm.diag
[2025-10-13 09:36:58] -rw-r--r--. 1 boinc boinc     20597 Oct 13 09:36 stderr.txt
[2025-10-13 09:36:58] HITS file was successfully produced:
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc 192578740 Oct 13 09:32 shared/HITS.pool.root.1
[2025-10-13 09:36:58]  *** Contents of shared directory: ***
[2025-10-13 09:36:58] total 406092
[2025-10-13 09:36:58] -rw-r--r--. 2 boinc boinc 220185163 Oct 13 05:23 ATLAS.root_0
[2025-10-13 09:36:58] -rw-r--r--. 2 boinc boinc     15120 Oct 13 05:23 start_atlas.sh
[2025-10-13 09:36:58] -rw-r--r--. 2 boinc boinc    569678 Oct 13 05:23 input.tar.gz
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc 192578740 Oct 13 09:32 HITS.pool.root.1
[2025-10-13 09:36:58] -rw-------. 1 boinc boinc   2478080 Oct 13 09:36 result.tar.gz
09:36:59 (27147): run_atlas exited; CPU time 54090.277013
09:36:59 (27147): called boinc_finish(0)

</stderr_txt>
]]>

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