Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:14:00 (16218): wrapper (7.7.26015): starting
14:14:00 (16218): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 14:14:00] Arguments: --nthreads 12
[2025-10-12 14:14:00] Threads: 12
[2025-10-12 14:14:00] Checking for CVMFS
[2025-10-12 14:14:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:14:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:14:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:14:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:14:00] 2.11.2.0 2914 223228 97688 151631 0 56 15935626 20275200 1 130560 1 108820781 99.983 13267455 12355 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:14:00] CVMFS is ok
[2025-10-12 14:14:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:14:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:14:00] Further information can be found at the LHC@home message board.
[2025-10-12 14:14:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:14:00] Checking for apptainer binary...
[2025-10-12 14:14:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:14:00] Running /usr/bin/apptainer --version
[2025-10-12 14:14:00] apptainer version 1.3.2-1.el7
[2025-10-12 14:14:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:14:02] c-205-5.aglt2.org
[2025-10-12 14:14:02] apptainer works
[2025-10-12 14:14:02] Set ATHENA_PROC_NUMBER=12
[2025-10-12 14:14:02] Set ATHENA_CORE_NUMBER=12
[2025-10-12 14:14:02] Starting ATLAS job with PandaID=6840182350
[2025-10-12 14:14:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:30:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:30:45]  status=None
[2025-10-12 15:30:45]  status_code=0
[2025-10-12 15:30:45]  storage_token=
[2025-10-12 15:30:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840182350/log.46676269._081197.job.log.tgz.1
[2025-10-12 15:30:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/07/log.46676269._081197.job.log.tgz.1
[2025-10-12 15:30:45]  workdir=None
[2025-10-12 15:30:45] ]
[2025-10-12 15:30:45] 2025-10-12 19:30:05,951 | INFO     | transferring file log.46676269._081197.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840182350/log.46676269._081197.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 15:30:45] 2025-10-12 19:30:05,951 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840182350/log.46676269._081197.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._081197.job
[2025-10-12 15:30:45] 2025-10-12 19:30:05,974 | INFO     | adding to output.list: log.46676269._081197.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/07/log.46676269._081197.job.log.tg
[2025-10-12 15:30:45] 2025-10-12 19:30:05,975 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:30:45] 2025-10-12 19:30:05,975 | INFO     | summary of transferred files:
[2025-10-12 15:30:45] 2025-10-12 19:30:05,975 | INFO     |  -- lfn=log.46676269._081197.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:30:45] 2025-10-12 19:30:05,975 | INFO     | stage-out finished correctly
[2025-10-12 15:30:45] 2025-10-12 19:30:06,060 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:30:45] 2025-10-12 19:30:06,553 | INFO     | PID=19939 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:30:45] 2025-10-12 19:30:07,350 | WARNING  | process 26307 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 15:30:45] 2025-10-12 19:30:07,350 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840182350/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:30:45] 2025-10-12 19:30:07,436 | INFO     | number of running child processes to parent process 26307: 1
[2025-10-12 15:30:45] 2025-10-12 19:30:07,436 | INFO     | maximum number of monitored processes: 6
[2025-10-12 15:30:45] 2025-10-12 19:30:07,553 | INFO     | time since job start (4550s) is within the limit (172800.0s)
[2025-10-12 15:30:45] 2025-10-12 19:30:07,789 | INFO     | job 6840182350 has state=finished
[2025-10-12 15:30:45] 2025-10-12 19:30:07,789 | INFO     | preparing for final server update for job 6840182350 in state='finished'
[2025-10-12 15:30:45] 2025-10-12 19:30:07,849 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 15:30:45] 2025-10-12 19:30:07,850 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:30:45] 2025-10-12 19:30:07,850 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:30:45] 2025-10-12 19:30:07,850 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:30:45] 2025-10-12 19:30:07,850 | INFO     | job 6840182350 has finished - writing final server update
[2025-10-12 15:30:45] 2025-10-12 19:30:07,850 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:30:45] 2025-10-12 19:30:07,851 | INFO     | executing command: lscpu
[2025-10-12 15:30:45] 2025-10-12 19:30:07,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:30:45] 2025-10-12 19:30:09,559 | INFO     | time since job start (4552s) is within the limit (172800.0s)
[2025-10-12 15:30:45] 2025-10-12 19:30:09,951 | INFO     | monitor loop #340: job 0:6840182350 is in state 'finished'
[2025-10-12 15:30:45] 2025-10-12 19:30:09,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:30:45] 2025-10-12 19:30:11,564 | INFO     | time since job start (4554s) is within the limit (172800.0s)
[2025-10-12 15:30:45] 2025-10-12 19:30:12,455 | INFO     | monitor loop #341: job 0:6840182350 is in state 'finished'
[2025-10-12 15:30:45] 2025-10-12 19:30:12,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:30:45] 2025-10-12 19:30:13,107 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 15:30:45] 2025-10-12 19:30:13,111 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0
[2025-10-12 15:30:45] 2025-10-12 19:30:13,114 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840182350/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:30:45] 2025-10-12 19:30:13,115 | INFO     | extracted standard info from prmon json
[2025-10-12 15:30:45] 2025-10-12 19:30:13,115 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:30:45] 2025-10-12 19:30:13,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:30:45] 2025-10-12 19:30:13,117 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:30:45] 2025-10-12 19:30:13,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:30:45] 2025-10-12 19:30:13,119 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:30:45] 2025-10-12 19:30:13,119 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 15:30:45] 2025-10-12 19:30:13,119 | INFO     | sum of deviations: -8439235442.0
[2025-10-12 15:30:45] 2025-10-12 19:30:13,119 | INFO     | mean x: 1760295234.5
[2025-10-12 15:30:45] 2025-10-12 19:30:13,120 | INFO     | mean y: 2777342.470588235
[2025-10-12 15:30:45] 2025-10-12 19:30:13,120 | INFO     | -- intersect: 152400117207.2058
[2025-10-12 15:30:45] 2025-10-12 19:30:13,120 | INFO     | intersect: 152400117207.2058
[2025-10-12 15:30:45] 2025-10-12 19:30:13,120 | INFO     | chi2: 0.0555342998022076
[2025-10-12 15:30:45] 2025-10-12 19:30:13,120 | INFO     | -- intersect: 152400117207.2058
[2025-10-12 15:30:45] 2025-10-12 19:30:13,120 | INFO     | current memory leak: -86.57 B/s (using 68 data points, chi2=0.06)
[2025-10-12 15:30:45] 2025-10-12 19:30:13,121 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-12 15:30:45] 2025-10-12 19:30:13,121 | INFO     | ..............................
[2025-10-12 15:30:45] 2025-10-12 19:30:13,121 | INFO     | . Timing measurements:
[2025-10-12 15:30:45] 2025-10-12 19:30:13,121 | INFO     | . get job = 0 s
[2025-10-12 15:30:45] 2025-10-12 19:30:13,121 | INFO     | . initial setup = 2 s
[2025-10-12 15:30:45] 2025-10-12 19:30:13,121 | INFO     | . payload setup = 7 s
[2025-10-12 15:30:45] 2025-10-12 19:30:13,121 | INFO     | . stage-in = 0 s
[2025-10-12 15:30:45] 2025-10-12 19:30:13,121 | INFO     | . payload execution = 4520 s
[2025-10-12 15:30:45] 2025-10-12 19:30:13,121 | INFO     | . stage-out = 0 s
[2025-10-12 15:30:45] 2025-10-12 19:30:13,122 | INFO     | . log creation = 0 s
[2025-10-12 15:30:45] 2025-10-12 19:30:13,122 | INFO     | ..............................
[2025-10-12 15:30:45] 2025-10-12 19:30:13,410 | INFO     | 
[2025-10-12 15:30:45] 2025-10-12 19:30:13,410 | INFO     | job summary report
[2025-10-12 15:30:45] 2025-10-12 19:30:13,410 | INFO     | --------------------------------------------------
[2025-10-12 15:30:45] 2025-10-12 19:30:13,411 | INFO     | PanDA job id: 6840182350
[2025-10-12 15:30:45] 2025-10-12 19:30:13,411 | INFO     | task id: 46676269
[2025-10-12 15:30:45] 2025-10-12 19:30:13,411 | INFO     | errors: (none)
[2025-10-12 15:30:45] 2025-10-12 19:30:13,411 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:30:45] 2025-10-12 19:30:13,411 | INFO     | pilot state: finished 
[2025-10-12 15:30:45] 2025-10-12 19:30:13,411 | INFO     | transexitcode: 0
[2025-10-12 15:30:45] 2025-10-12 19:30:13,412 | INFO     | exeerrorcode: 0
[2025-10-12 15:30:45] 2025-10-12 19:30:13,412 | INFO     | exeerrordiag: 
[2025-10-12 15:30:45] 2025-10-12 19:30:13,412 | INFO     | exitcode: 0
[2025-10-12 15:30:45] 2025-10-12 19:30:13,412 | INFO     | exitmsg: OK
[2025-10-12 15:30:45] 2025-10-12 19:30:13,412 | INFO     | cpuconsumptiontime: 46939 s
[2025-10-12 15:30:45] 2025-10-12 19:30:13,412 | INFO     | nevents: 400
[2025-10-12 15:30:45] 2025-10-12 19:30:13,413 | INFO     | neventsw: 0
[2025-10-12 15:30:45] 2025-10-12 19:30:13,413 | INFO     | pid: 26307
[2025-10-12 15:30:45] 2025-10-12 19:30:13,413 | INFO     | pgrp: 26307
[2025-10-12 15:30:45] 2025-10-12 19:30:13,413 | INFO     | corecount: 12
[2025-10-12 15:30:45] 2025-10-12 19:30:13,413 | INFO     | event service: False
[2025-10-12 15:30:45] 2025-10-12 19:30:13,413 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4531: 2375307, 4532: 2384361, 4539: 2384499}
[2025-10-12 15:30:45] 2025-10-12 19:30:13,413 | INFO     | --------------------------------------------------
[2025-10-12 15:30:45] 2025-10-12 19:30:13,414 | INFO     | 
[2025-10-12 15:30:45] 2025-10-12 19:30:13,414 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:30:45] 2025-10-12 19:30:13,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,443 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,443 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,443 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,443 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:30:45] 2025-10-12 19:30:13,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,446 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:30:45] 2025-10-12 19:30:13,446 | INFO     | job 6840182350 has completed (purged errors)
[2025-10-12 15:30:45] 2025-10-12 19:30:13,446 | INFO     | overall cleanup function is called
[2025-10-12 15:30:45] 2025-10-12 19:30:14,454 | INFO     | --- collectZombieJob: --- 10, [26307]
[2025-10-12 15:30:45] 2025-10-12 19:30:14,454 | INFO     | zombie collector waiting for pid 26307
[2025-10-12 15:30:45] 2025-10-12 19:30:14,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:30:45] 2025-10-12 19:30:14,455 | INFO     | collected zombie processes
[2025-10-12 15:30:45] 2025-10-12 19:30:14,455 | INFO     | will attempt to kill all subprocesses of pid=26307
[2025-10-12 15:30:45] 2025-10-12 19:30:14,544 | INFO     | process IDs to be killed: [26307] (in reverse order)
[2025-10-12 15:30:45] 2025-10-12 19:30:14,600 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:30:45] 2025-10-12 19:30:14,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:30:45] 2025-10-12 19:30:14,604 | INFO     | did not find any defunct processes belonging to 26307
[2025-10-12 15:30:45] 2025-10-12 19:30:14,608 | INFO     | did not find any defunct processes belonging to 26307
[2025-10-12 15:30:45] 2025-10-12 19:30:14,608 | INFO     | ready for new job
[2025-10-12 15:30:45] 2025-10-12 19:30:14,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:30:45] 2025-10-12 19:30:14,609 | INFO     | ***************************************
[2025-10-12 15:30:45] 2025-10-12 19:30:14,609 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:30:45] 2025-10-12 19:30:14,609 | INFO     | ***************************************
[2025-10-12 15:30:45] 2025-10-12 19:30:14,610 | INFO     | 
[2025-10-12 15:30:45] 2025-10-12 19:30:14,610 | INFO     | architecture information:
[2025-10-12 15:30:45] 2025-10-12 19:30:14,611 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:30:45] 2025-10-12 19:30:14,626 | INFO     | cat /etc/os-release:
[2025-10-12 15:30:45] NAME="CentOS Linux"
[2025-10-12 15:30:45] VERSION="7 (Core)"
[2025-10-12 15:30:45] ID="centos"
[2025-10-12 15:30:45] ID_LIKE="rhel fedora"
[2025-10-12 15:30:45] VERSION_ID="7"
[2025-10-12 15:30:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:30:45] ANSI_COLOR="0;31"
[2025-10-12 15:30:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:30:45] HOME_URL="https://www.centos.org/"
[2025-10-12 15:30:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:30:45] 
[2025-10-12 15:30:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:30:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:30:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:30:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:30:45] 
[2025-10-12 15:30:45] 2025-10-12 19:30:14,626 | INFO     | ***************************************
[2025-10-12 15:30:45] 2025-10-12 19:30:15,129 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:30:45] 2025-10-12 19:30:15,251 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-10-12 15:30:45] 2025-10-12 19:30:15,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:30:45] 2025-10-12 19:30:15,251 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:30:45] 2025-10-12 19:30:15,251 | INFO     | update_server=False
[2025-10-12 15:30:45] 2025-10-12 19:30:15,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:30:45] 2025-10-12 19:30:15,359 | INFO     | all job control threads have been joined
[2025-10-12 15:30:45] 2025-10-12 19:30:15,391 | INFO     | all data control threads have been joined
[2025-10-12 15:30:45] 2025-10-12 19:30:15,752 | INFO     | all payload control threads have been joined
[2025-10-12 15:30:45] 2025-10-12 19:30:15,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:30:45] 2025-10-12 19:30:15,975 | INFO     | aborting loop
[2025-10-12 15:30:45] 2025-10-12 19:30:16,257 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:16,263 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:16,365 | INFO     | [job] control thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:16,396 | INFO     | [data] control thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:16,530 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:16,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:30:45] 2025-10-12 19:30:16,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:30:45] 2025-10-12 19:30:16,758 | INFO     | [payload] control thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:16,918 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:16,981 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:17,004 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:17,320 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:17,407 | INFO     | [job] validate thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:17,413 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:17,682 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:18,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:30:45] 2025-10-12 19:30:18,574 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:19,217 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:20,666 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:30:45] 2025-10-12 19:30:23,907 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:30:45] 2025-10-12 19:30:25,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598160959296)>', '<ExcThread(monitor, started 140597423761152)>']
[2025-10-12 15:30:45] 2025-10-12 19:30:30,487 | INFO     | all workflow threads have been joined
[2025-10-12 15:30:45] 2025-10-12 19:30:30,487 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:30:45] 2025-10-12 19:30:30,488 | INFO     | traces error code: 0
[2025-10-12 15:30:45] 2025-10-12 19:30:30,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:30:45] 2025-10-12 19:30:44,766 | INFO     | PID=19939 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:30:45] 2025-10-12 19:30:44,767 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:30:45] 2025-10-12 19:30:44,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:30:45] 2025-10-12 19:30:44,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:30:45] 2025-10-12 19:30:44,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:30:45] 2025-10-12 19:30:44,768 | INFO     | [monitor] control thread has ended
[2025-10-12 15:30:45] 2025-10-12 19:30:44,862 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:30:45] 2025-10-12 19:30:44,866 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:30:45] 2025-10-12 19:30:44,870 [wrapper] pilotpid: 19939
[2025-10-12 15:30:45] 2025-10-12 19:30:44,873 [wrapper] Pilot exit status: 0
[2025-10-12 15:30:45] 2025-10-12 19:30:44,890 [wrapper] pandaids: 6840182350
[2025-10-12 15:30:45] 2025-10-12 19:30:44,928 [wrapper] cleanup supervisor_pilot 16810 19940
[2025-10-12 15:30:45] 2025-10-12 19:30:44,932 [wrapper] Test setup, not cleaning
[2025-10-12 15:30:45] 2025-10-12 19:30:44,936 [wrapper] apfmon messages muted
[2025-10-12 15:30:45] 2025-10-12 19:30:44,940 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:30:45] 2025-10-12 19:30:44,944 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:30:45]  *** Error codes and diagnostics ***
[2025-10-12 15:30:45]     "exeErrorCode": 0,
[2025-10-12 15:30:45]     "exeErrorDiag": "",
[2025-10-12 15:30:45]     "pilotErrorCode": 0,
[2025-10-12 15:30:45]     "pilotErrorDiag": "",
[2025-10-12 15:30:45]  *** Listing of results directory ***
[2025-10-12 15:30:45] total 410128
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 15:30:45] -rwx------ 1 boincer umatlas     36292 Oct 12 10:46 runpilot2-wrapper.sh
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 10:46 queuedata.json
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:30:45] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:13 run_atlas
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:13 job.xml
[2025-10-12 15:30:45] -rw-r--r-- 2 boincer umatlas 218134157 Oct 12 14:14 EVNT.46676267._004533.pool.root.1
[2025-10-12 15:30:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:14 start_atlas.sh
[2025-10-12 15:30:45] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:14 shared
[2025-10-12 15:30:45] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 14:14 input.tar.gz
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:14 boinc_lockfile
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 14:14 pandaJob.out
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas    975528 Oct 12 14:14 agis_schedconf.cvmfs.json
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas   1560580 Oct 12 14:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:30:45] drwx------ 5 boincer umatlas      4096 Oct 12 14:14 pilot3
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 15:27 init_data.xml
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas 195850149 Oct 12 15:29 HITS.46676269._081197.pool.root.1
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas       530 Oct 12 15:29 boinc_task_state.xml
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas      1050 Oct 12 15:30 memory_monitor_summary.json
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas    382733 Oct 12 15:30 log.46676269._081197.job.log.tgz.1
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas      7855 Oct 12 15:30 heartbeat.json
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas        27 Oct 12 15:30 wrapper_checkpoint.txt
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:30 boinc_mmap_file
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas       745 Oct 12 15:30 pilotlog.txt
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas        95 Oct 12 15:30 pilot_heartbeat.json
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas    660457 Oct 12 15:30 log.46676269._081197.job.log.1
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas       357 Oct 12 15:30 output.list
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:30 runtime_log
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas   1064960 Oct 12 15:30 result.tar.gz
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 15:30 runtime_log.err
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas       658 Oct 12 15:30 EZINDmQWCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDme9TMDmjweEYm.diag
[2025-10-12 15:30:45] -rw-r--r-- 1 boincer umatlas     22094 Oct 12 15:30 stderr.txt
[2025-10-12 15:30:45] HITS file was successfully produced:
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas 195850149 Oct 12 15:29 shared/HITS.pool.root.1
[2025-10-12 15:30:45]  *** Contents of shared directory: ***
[2025-10-12 15:30:45] total 405904
[2025-10-12 15:30:45] -rw-r--r-- 2 boincer umatlas 218134157 Oct 12 14:14 ATLAS.root_0
[2025-10-12 15:30:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:14 start_atlas.sh
[2025-10-12 15:30:45] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 14:14 input.tar.gz
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas 195850149 Oct 12 15:29 HITS.pool.root.1
[2025-10-12 15:30:45] -rw------- 1 boincer umatlas   1064960 Oct 12 15:30 result.tar.gz
15:30:46 (16218): run_atlas exited; CPU time 46910.325147
15:30:46 (16218): called boinc_finish(0)

</stderr_txt>
]]>

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