Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:09:52 (3442032): wrapper (7.7.26015): starting
06:09:52 (3442032): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 06:09:52] Arguments: --nthreads 3
[2025-10-13 06:09:52] Threads: 3
[2025-10-13 06:09:52] Checking for CVMFS
[2025-10-13 06:09:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:09:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:09:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:09:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:09:52] 2.9.2.0 1842130 5249 86720 151647 1 57 29735967 36864001 0 130560 0 4201193 99.991 180148 857 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 06:09:52] CVMFS is ok
[2025-10-13 06:09:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:09:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:09:52] Further information can be found at the LHC@home message board.
[2025-10-13 06:09:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:09:52] Checking for apptainer binary...
[2025-10-13 06:09:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:09:52] Running /usr/bin/apptainer --version
[2025-10-13 06:09:52] apptainer version 1.4.1-1.1
[2025-10-13 06:09:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:09:53] thA335a
[2025-10-13 06:09:53] apptainer works
[2025-10-13 06:09:53] Set ATHENA_PROC_NUMBER=3
[2025-10-13 06:09:53] Set ATHENA_CORE_NUMBER=3
[2025-10-13 06:09:53] Starting ATLAS job with PandaID=6839989320
[2025-10-13 06:09:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:32:15]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:32:15] 2025-10-13 05:31:44,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:32:15] 2025-10-13 05:31:44,612 | INFO     | did not find any defunct processes belonging to 3452194
[2025-10-13 07:32:15] 2025-10-13 05:31:44,613 | INFO     | did not find any defunct processes belonging to 3452194
[2025-10-13 07:32:15] 2025-10-13 05:31:44,613 | INFO     | ready for new job
[2025-10-13 07:32:15] 2025-10-13 05:31:44,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:32:15] 2025-10-13 05:31:44,614 | INFO     | ***************************************
[2025-10-13 07:32:15] 2025-10-13 05:31:44,614 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:32:15] 2025-10-13 05:31:44,614 | INFO     | ***************************************
[2025-10-13 07:32:15] 2025-10-13 05:31:44,614 | INFO     | 
[2025-10-13 07:32:15] 2025-10-13 05:31:44,614 | INFO     | architecture information:
[2025-10-13 07:32:15] 2025-10-13 05:31:44,615 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:32:15] 2025-10-13 05:31:44,624 | INFO     | cat /etc/os-release:
[2025-10-13 07:32:15] NAME="CentOS Linux"
[2025-10-13 07:32:15] VERSION="7 (Core)"
[2025-10-13 07:32:15] ID="centos"
[2025-10-13 07:32:15] ID_LIKE="rhel fedora"
[2025-10-13 07:32:15] VERSION_ID="7"
[2025-10-13 07:32:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:32:15] ANSI_COLOR="0;31"
[2025-10-13 07:32:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:32:15] HOME_URL="https://www.centos.org/"
[2025-10-13 07:32:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:32:15] 
[2025-10-13 07:32:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:32:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:32:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:32:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:32:15] 
[2025-10-13 07:32:15] 2025-10-13 05:31:44,624 | INFO     | ***************************************
[2025-10-13 07:32:15] 2025-10-13 05:31:45,127 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 07:32:15] 2025-10-13 05:31:45,141 | INFO     | sufficient remaining disk space (374918348800 B)
[2025-10-13 07:32:15] 2025-10-13 05:31:45,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:32:15] 2025-10-13 05:31:45,141 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:32:15] 2025-10-13 05:31:45,141 | INFO     | update_server=False
[2025-10-13 07:32:15] 2025-10-13 05:31:45,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:32:15] 2025-10-13 05:31:45,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:32:15] 2025-10-13 05:31:45,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:32:15] 2025-10-13 05:31:45,174 | INFO     | all data control threads have been joined
[2025-10-13 07:32:15] 2025-10-13 05:31:45,332 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:32:15] 2025-10-13 05:31:45,332 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:32:15] 2025-10-13 05:31:45,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:32:15] 2025-10-13 05:31:45,332 | INFO     | will abort loop
[2025-10-13 07:32:15] 2025-10-13 05:31:46,147 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:46,147 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:46,179 | INFO     | [data] control thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:46,250 | INFO     | all payload control threads have been joined
[2025-10-13 07:32:15] 2025-10-13 05:31:46,338 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:46,449 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:46,599 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:46,599 | INFO     | [job] validate thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:46,603 | INFO     | all job control threads have been joined
[2025-10-13 07:32:15] 2025-10-13 05:31:46,625 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:46,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:32:15] 2025-10-13 05:31:47,147 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:47,256 | INFO     | [payload] control thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:47,323 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:47,360 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:47,609 | INFO     | [job] control thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:47,624 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:50,816 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:31:55,419 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:32:15] 2025-10-13 05:31:56,425 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:32:15] 2025-10-13 05:32:04,276 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:32:15] 2025-10-13 05:32:05,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348259309376)>', '<ExcThread(monitor, started 140347770394368)>']
[2025-10-13 07:32:15] 2025-10-13 05:32:10,459 | INFO     | all workflow threads have been joined
[2025-10-13 07:32:15] 2025-10-13 05:32:10,459 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:32:15] 2025-10-13 05:32:10,459 | INFO     | traces error code: 0
[2025-10-13 07:32:15] 2025-10-13 05:32:10,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:32:15] 2025-10-13 05:32:15,408 | INFO     | PID=3445756 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:32:15] 2025-10-13 05:32:15,408 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:32:15] 2025-10-13 05:32:15,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:32:15] 2025-10-13 05:32:15,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:32:15] 2025-10-13 05:32:15,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:32:15] 2025-10-13 05:32:15,408 | INFO     | [monitor] control thread has ended
[2025-10-13 07:32:15] 2025-10-13 05:32:15,454 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:32:15] 2025-10-13 05:32:15,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:32:15] 2025-10-13 05:32:15,459 [wrapper] pilotpid: 3445756
[2025-10-13 07:32:15] 2025-10-13 05:32:15,462 [wrapper] Pilot exit status: 0
[2025-10-13 07:32:15] 2025-10-13 05:32:15,470 [wrapper] pandaids: 6839989320
[2025-10-13 07:32:15] 2025-10-13 05:32:15,487 [wrapper] cleanup supervisor_pilot 3463956 3445757
[2025-10-13 07:32:15] 2025-10-13 05:32:15,489 [wrapper] Test setup, not cleaning
[2025-10-13 07:32:15] 2025-10-13 05:32:15,492 [wrapper] apfmon messages muted
[2025-10-13 07:32:15] 2025-10-13 05:32:15,494 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:32:15] 2025-10-13 05:32:15,497 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:32:15]  *** Error codes and diagnostics ***
[2025-10-13 07:32:15]     "exeErrorCode": 0,
[2025-10-13 07:32:15]     "exeErrorDiag": "",
[2025-10-13 07:32:15]     "pilotErrorCode": 0,
[2025-10-13 07:32:15]     "pilotErrorDiag": "",
[2025-10-13 07:32:15]  *** Listing of results directory ***
[2025-10-13 07:32:15] total 414444
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:50 queuedata.json
[2025-10-13 07:32:15] -rwx------ 1 boinc boinc     36292 Oct 12 14:51 runpilot2-wrapper.sh
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:32:15] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:09 run_atlas
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:09 job.xml
[2025-10-13 07:32:15] -rw-r--r-- 2 boinc boinc 220831213 Oct 13 06:09 EVNT.46676267._003821.pool.root.1
[2025-10-13 07:32:15] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:09 shared
[2025-10-13 07:32:15] -rw-r--r-- 2 boinc boinc    569681 Oct 13 06:09 input.tar.gz
[2025-10-13 07:32:15] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:09 start_atlas.sh
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:09 boinc_setup_complete
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc      6447 Oct 13 06:09 init_data.xml
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:09 boinc_lockfile
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:09 pandaJob.out
[2025-10-13 07:32:15] -rw------- 1 boinc boinc    974373 Oct 13 06:09 agis_schedconf.cvmfs.json
[2025-10-13 07:32:15] -rw------- 1 boinc boinc   1560580 Oct 13 06:09 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:32:15] drwx------ 5 boinc boinc      4096 Oct 13 06:09 pilot3
[2025-10-13 07:32:15] -rw------- 1 boinc boinc 197721670 Oct 13 07:31 HITS.46676269._078693.pool.root.1
[2025-10-13 07:32:15] -rw------- 1 boinc boinc        95 Oct 13 07:31 pilot_heartbeat.json
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc       529 Oct 13 07:31 boinc_task_state.xml
[2025-10-13 07:32:15] -rw------- 1 boinc boinc      1014 Oct 13 07:31 memory_monitor_summary.json
[2025-10-13 07:32:15] -rw------- 1 boinc boinc    254963 Oct 13 07:31 log.46676269._078693.job.log.tgz.1
[2025-10-13 07:32:15] -rw------- 1 boinc boinc      7763 Oct 13 07:31 heartbeat.json
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:32 boinc_mmap_file
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:32 wrapper_checkpoint.txt
[2025-10-13 07:32:15] -rw------- 1 boinc boinc       747 Oct 13 07:32 pilotlog.txt
[2025-10-13 07:32:15] -rw------- 1 boinc boinc    721180 Oct 13 07:32 log.46676269._078693.job.log.1
[2025-10-13 07:32:15] -rw------- 1 boinc boinc       357 Oct 13 07:32 output.list
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:32 runtime_log
[2025-10-13 07:32:15] -rw------- 1 boinc boinc    993280 Oct 13 07:32 result.tar.gz
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc      8782 Oct 13 07:32 runtime_log.err
[2025-10-13 07:32:15] -rw------- 1 boinc boinc       659 Oct 13 07:32 DEZLDm2iAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQtjNDmNqzSIo.diag
[2025-10-13 07:32:15] -rw-r--r-- 1 boinc boinc     10186 Oct 13 07:32 stderr.txt
[2025-10-13 07:32:15] HITS file was successfully produced:
[2025-10-13 07:32:15] -rw------- 1 boinc boinc 197721670 Oct 13 07:31 shared/HITS.pool.root.1
[2025-10-13 07:32:15]  *** Contents of shared directory: ***
[2025-10-13 07:32:15] total 410300
[2025-10-13 07:32:15] -rw-r--r-- 2 boinc boinc 220831213 Oct 13 06:09 ATLAS.root_0
[2025-10-13 07:32:15] -rw-r--r-- 2 boinc boinc    569681 Oct 13 06:09 input.tar.gz
[2025-10-13 07:32:15] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:09 start_atlas.sh
[2025-10-13 07:32:15] -rw------- 1 boinc boinc 197721670 Oct 13 07:31 HITS.pool.root.1
[2025-10-13 07:32:15] -rw------- 1 boinc boinc    993280 Oct 13 07:32 result.tar.gz
07:32:16 (3442032): run_atlas exited; CPU time 14030.781611
07:32:16 (3442032): called boinc_finish(0)

</stderr_txt>
]]>

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