Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:12:11 (31258): wrapper (7.7.26015): starting
14:12:11 (31258): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:12:11] Arguments: --nthreads 8
[2025-10-12 14:12:11] Threads: 8
[2025-10-12 14:12:11] Checking for CVMFS
[2025-10-12 14:12:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:12:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:12:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:12:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:12:12] 2.11.2.0 14221 53211 121944 151631 0 57 16467163 18432000 1833 130560 0 49598833 99.976 2272737 37565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:12:12] CVMFS is ok
[2025-10-12 14:12:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:12:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:12:12] Further information can be found at the LHC@home message board.
[2025-10-12 14:12:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:12:12] Checking for apptainer binary...
[2025-10-12 14:12:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:12:12] Running /usr/bin/apptainer --version
[2025-10-12 14:12:12] apptainer version 1.3.2-1.el7
[2025-10-12 14:12:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:12:12] c-206-9.aglt2.org
[2025-10-12 14:12:12] apptainer works
[2025-10-12 14:12:12] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:12:12] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:12:12] Starting ATLAS job with PandaID=6840392523
[2025-10-12 14:12:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:14:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:14:07] 2025-10-12 21:13:33,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:14:07] 2025-10-12 21:13:33,676 | INFO     | time since job start (10870s) is within the limit (172800.0s)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,413 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:14:07] 2025-10-12 21:13:34,419 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2461.2916666666665
[2025-10-12 17:14:07] 2025-10-12 21:13:34,424 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840392523/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,425 | INFO     | extracted standard info from prmon json
[2025-10-12 17:14:07] 2025-10-12 21:13:34,425 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:14:07] 2025-10-12 21:13:34,425 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:14:07] 2025-10-12 21:13:34,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:14:07] 2025-10-12 21:13:34,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:14:07] 2025-10-12 21:13:34,431 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:14:07] 2025-10-12 21:13:34,432 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 17:14:07] 2025-10-12 21:13:34,433 | INFO     | sum of deviations: -5889330704.999998
[2025-10-12 17:14:07] 2025-10-12 21:13:34,433 | INFO     | mean x: 1760298167.5
[2025-10-12 17:14:07] 2025-10-12 21:13:34,434 | INFO     | mean y: 2514429.404494382
[2025-10-12 17:14:07] 2025-10-12 21:13:34,434 | INFO     | -- intersect: 5930777333.259782
[2025-10-12 17:14:07] 2025-10-12 21:13:34,434 | INFO     | intersect: 5930777333.259782
[2025-10-12 17:14:07] 2025-10-12 21:13:34,434 | INFO     | chi2: 1.570859101376419
[2025-10-12 17:14:07] 2025-10-12 21:13:34,435 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,436 | INFO     | sum of deviations: -5557131048.999986
[2025-10-12 17:14:07] 2025-10-12 21:13:34,437 | INFO     | mean x: 1760298015.0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,437 | INFO     | mean y: 2514783.104046243
[2025-10-12 17:14:07] 2025-10-12 21:13:34,437 | INFO     | -- intersect: 6095563007.710313
[2025-10-12 17:14:07] 2025-10-12 21:13:34,437 | INFO     | intersect: 6095563007.710313
[2025-10-12 17:14:07] 2025-10-12 21:13:34,437 | INFO     | chi2: 1.5704475863164702
[2025-10-12 17:14:07] 2025-10-12 21:13:34,438 | INFO     | current chi2=1.5704475863164702 (change=0.026196815461569704 %)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,438 | INFO     | right removable region: 172
[2025-10-12 17:14:07] 2025-10-12 21:13:34,438 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,440 | INFO     | sum of deviations: -31911504742.000004
[2025-10-12 17:14:07] 2025-10-12 21:13:34,440 | INFO     | mean x: 1760298320.0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,440 | INFO     | mean y: 2541765.225433526
[2025-10-12 17:14:07] 2025-10-12 21:13:34,440 | INFO     | -- intersect: 34991526060.876076
[2025-10-12 17:14:07] 2025-10-12 21:13:34,440 | INFO     | intersect: 34991526060.876076
[2025-10-12 17:14:07] 2025-10-12 21:13:34,441 | INFO     | chi2: 0.16075242239036452
[2025-10-12 17:14:07] 2025-10-12 21:13:34,441 | INFO     | current chi2=0.16075242239036452 (change=89.76659190824245 %)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,442 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,443 | INFO     | sum of deviations: -27671186975.999996
[2025-10-12 17:14:07] 2025-10-12 21:13:34,443 | INFO     | mean x: 1760298472.5
[2025-10-12 17:14:07] 2025-10-12 21:13:34,443 | INFO     | mean y: 2536970.6904761903
[2025-10-12 17:14:07] 2025-10-12 21:13:34,443 | INFO     | -- intersect: 33132673039.51954
[2025-10-12 17:14:07] 2025-10-12 21:13:34,444 | INFO     | intersect: 33132673039.51954
[2025-10-12 17:14:07] 2025-10-12 21:13:34,444 | INFO     | chi2: 0.15768335374254944
[2025-10-12 17:14:07] 2025-10-12 21:13:34,444 | INFO     | current chi2=0.15768335374254944 (change=1.9091896732742777 %)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,444 | INFO     | left removable region: 20
[2025-10-12 17:14:07] 2025-10-12 21:13:34,445 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,446 | INFO     | sum of deviations: -16049929020.500002
[2025-10-12 17:14:07] 2025-10-12 21:13:34,446 | INFO     | mean x: 1760298594.5
[2025-10-12 17:14:07] 2025-10-12 21:13:34,446 | INFO     | mean y: 2524181.2302631577
[2025-10-12 17:14:07] 2025-10-12 21:13:34,446 | INFO     | -- intersect: 25948443800.097965
[2025-10-12 17:14:07] 2025-10-12 21:13:34,447 | INFO     | intersect: 25948443800.097965
[2025-10-12 17:14:07] 2025-10-12 21:13:34,447 | INFO     | chi2: 0.1277131059015836
[2025-10-12 17:14:07] 2025-10-12 21:13:34,447 | INFO     | -- intersect: 25948443800.097965
[2025-10-12 17:14:07] 2025-10-12 21:13:34,447 | INFO     | current memory leak: -14.74 B/s (using 152 data points, chi2=0.13)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,448 | INFO     | could have reported an average CPU frequency of 2558 MHz (9 samples)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,448 | INFO     | ..............................
[2025-10-12 17:14:07] 2025-10-12 21:13:34,448 | INFO     | . Timing measurements:
[2025-10-12 17:14:07] 2025-10-12 21:13:34,448 | INFO     | . get job = 0 s
[2025-10-12 17:14:07] 2025-10-12 21:13:34,449 | INFO     | . initial setup = 2 s
[2025-10-12 17:14:07] 2025-10-12 21:13:34,449 | INFO     | . payload setup = 4 s
[2025-10-12 17:14:07] 2025-10-12 21:13:34,449 | INFO     | . stage-in = 0 s
[2025-10-12 17:14:07] 2025-10-12 21:13:34,449 | INFO     | . payload execution = 10838 s
[2025-10-12 17:14:07] 2025-10-12 21:13:34,449 | INFO     | . stage-out = 2 s
[2025-10-12 17:14:07] 2025-10-12 21:13:34,449 | INFO     | . log creation = 0 s
[2025-10-12 17:14:07] 2025-10-12 21:13:34,450 | INFO     | ..............................
[2025-10-12 17:14:07] 2025-10-12 21:13:34,942 | INFO     | 
[2025-10-12 17:14:07] 2025-10-12 21:13:34,943 | INFO     | job summary report
[2025-10-12 17:14:07] 2025-10-12 21:13:34,943 | INFO     | --------------------------------------------------
[2025-10-12 17:14:07] 2025-10-12 21:13:34,943 | INFO     | PanDA job id: 6840392523
[2025-10-12 17:14:07] 2025-10-12 21:13:34,943 | INFO     | task id: 46676269
[2025-10-12 17:14:07] 2025-10-12 21:13:34,943 | INFO     | errors: (none)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:14:07] 2025-10-12 21:13:34,944 | INFO     | pilot state: finished 
[2025-10-12 17:14:07] 2025-10-12 21:13:34,944 | INFO     | transexitcode: 0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,944 | INFO     | exeerrorcode: 0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,944 | INFO     | exeerrordiag: 
[2025-10-12 17:14:07] 2025-10-12 21:13:34,944 | INFO     | exitcode: 0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,945 | INFO     | exitmsg: OK
[2025-10-12 17:14:07] 2025-10-12 21:13:34,945 | INFO     | cpuconsumptiontime: 82250 s
[2025-10-12 17:14:07] 2025-10-12 21:13:34,945 | INFO     | nevents: 400
[2025-10-12 17:14:07] 2025-10-12 21:13:34,945 | INFO     | neventsw: 0
[2025-10-12 17:14:07] 2025-10-12 21:13:34,945 | INFO     | pid: 9035
[2025-10-12 17:14:07] 2025-10-12 21:13:34,945 | INFO     | pgrp: 9035
[2025-10-12 17:14:07] 2025-10-12 21:13:34,946 | INFO     | corecount: 8
[2025-10-12 17:14:07] 2025-10-12 21:13:34,946 | INFO     | event service: False
[2025-10-12 17:14:07] 2025-10-12 21:13:34,946 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 10847: 2378159, 10849: 2387157, 10851: 2387341, 10856: 2387599}
[2025-10-12 17:14:07] 2025-10-12 21:13:34,946 | INFO     | --------------------------------------------------
[2025-10-12 17:14:07] 2025-10-12 21:13:34,946 | INFO     | 
[2025-10-12 17:14:07] 2025-10-12 21:13:34,947 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 17:14:07] 2025-10-12 21:13:34,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,973 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,973 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:14:07] 2025-10-12 21:13:34,976 | INFO     | job 6840392523 has completed (purged errors)
[2025-10-12 17:14:07] 2025-10-12 21:13:34,976 | INFO     | overall cleanup function is called
[2025-10-12 17:14:07] 2025-10-12 21:13:35,984 | INFO     | --- collectZombieJob: --- 10, [9035]
[2025-10-12 17:14:07] 2025-10-12 21:13:35,985 | INFO     | zombie collector waiting for pid 9035
[2025-10-12 17:14:07] 2025-10-12 21:13:35,985 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:14:07] 2025-10-12 21:13:35,985 | INFO     | collected zombie processes
[2025-10-12 17:14:07] 2025-10-12 21:13:35,985 | INFO     | will attempt to kill all subprocesses of pid=9035
[2025-10-12 17:14:07] 2025-10-12 21:13:36,154 | INFO     | process IDs to be killed: [9035] (in reverse order)
[2025-10-12 17:14:07] 2025-10-12 21:13:36,208 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:14:07] 2025-10-12 21:13:36,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:14:07] 2025-10-12 21:13:36,214 | INFO     | did not find any defunct processes belonging to 9035
[2025-10-12 17:14:07] 2025-10-12 21:13:36,218 | INFO     | did not find any defunct processes belonging to 9035
[2025-10-12 17:14:07] 2025-10-12 21:13:36,219 | INFO     | ready for new job
[2025-10-12 17:14:07] 2025-10-12 21:13:36,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:14:07] 2025-10-12 21:13:36,221 | INFO     | ***************************************
[2025-10-12 17:14:07] 2025-10-12 21:13:36,221 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:14:07] 2025-10-12 21:13:36,221 | INFO     | ***************************************
[2025-10-12 17:14:07] 2025-10-12 21:13:36,221 | INFO     | 
[2025-10-12 17:14:07] 2025-10-12 21:13:36,222 | INFO     | architecture information:
[2025-10-12 17:14:07] 2025-10-12 21:13:36,223 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:14:07] 2025-10-12 21:13:36,235 | INFO     | cat /etc/os-release:
[2025-10-12 17:14:07] NAME="CentOS Linux"
[2025-10-12 17:14:07] VERSION="7 (Core)"
[2025-10-12 17:14:07] ID="centos"
[2025-10-12 17:14:07] ID_LIKE="rhel fedora"
[2025-10-12 17:14:07] VERSION_ID="7"
[2025-10-12 17:14:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:14:07] ANSI_COLOR="0;31"
[2025-10-12 17:14:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:14:07] HOME_URL="https://www.centos.org/"
[2025-10-12 17:14:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:14:07] 
[2025-10-12 17:14:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:14:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:14:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:14:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:14:07] 
[2025-10-12 17:14:07] 2025-10-12 21:13:36,235 | INFO     | ***************************************
[2025-10-12 17:14:07] 2025-10-12 21:13:36,737 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 17:14:07] 2025-10-12 21:13:36,750 | INFO     | sufficient remaining disk space (28458352640 B)
[2025-10-12 17:14:07] 2025-10-12 21:13:36,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:14:07] 2025-10-12 21:13:36,751 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:14:07] 2025-10-12 21:13:36,751 | INFO     | update_server=False
[2025-10-12 17:14:07] 2025-10-12 21:13:36,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:14:07] 2025-10-12 21:13:36,752 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:14:07] 2025-10-12 21:13:36,753 | INFO     | all data control threads have been joined
[2025-10-12 17:14:07] 2025-10-12 21:13:37,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:14:07] 2025-10-12 21:13:37,172 | INFO     | aborting loop
[2025-10-12 17:14:07] 2025-10-12 21:13:37,403 | INFO     | all payload control threads have been joined
[2025-10-12 17:14:07] 2025-10-12 21:13:37,648 | INFO     | all job control threads have been joined
[2025-10-12 17:14:07] 2025-10-12 21:13:37,757 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:37,758 | INFO     | [data] control thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:37,928 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:37,929 | INFO     | [job] validate thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:38,174 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:38,174 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:38,266 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:38,408 | INFO     | [payload] control thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:38,474 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:38,642 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:38,654 | INFO     | [job] control thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:38,757 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:38,873 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:39,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:14:07] 2025-10-12 21:13:40,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:14:07] 2025-10-12 21:13:40,562 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:40,704 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:14:07] 2025-10-12 21:13:44,129 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:47,275 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:14:07] 2025-10-12 21:13:48,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:14:07] 2025-10-12 21:13:48,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350888654656)>', '<ExcThread(monitor, started 140350446356224)>']
[2025-10-12 17:14:07] 2025-10-12 21:13:53,386 | INFO     | all workflow threads have been joined
[2025-10-12 17:14:07] 2025-10-12 21:13:53,386 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:14:07] 2025-10-12 21:13:53,386 | INFO     | traces error code: 0
[2025-10-12 17:14:07] 2025-10-12 21:13:53,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:14:07] 2025-10-12 21:14:06,977 | INFO     | PID=2624 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 17:14:07] 2025-10-12 21:14:06,978 | INFO     | .. there are 3 such processes running
[2025-10-12 17:14:07] 2025-10-12 21:14:06,978 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:14:07] 2025-10-12 21:14:06,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:14:07] 2025-10-12 21:14:06,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:14:07] 2025-10-12 21:14:06,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:14:07] 2025-10-12 21:14:06,979 | INFO     | [monitor] control thread has ended
[2025-10-12 17:14:07] 2025-10-12 21:14:07,088 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:14:07] 2025-10-12 21:14:07,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:14:07] 2025-10-12 21:14:07,093 [wrapper] pilotpid: 2624
[2025-10-12 17:14:07] 2025-10-12 21:14:07,096 [wrapper] Pilot exit status: 0
[2025-10-12 17:14:07] 2025-10-12 21:14:07,106 [wrapper] pandaids: 6840392523
[2025-10-12 17:14:07] 2025-10-12 21:14:07,146 [wrapper] cleanup supervisor_pilot 11377 2625
[2025-10-12 17:14:07] 2025-10-12 21:14:07,148 [wrapper] Test setup, not cleaning
[2025-10-12 17:14:07] 2025-10-12 21:14:07,151 [wrapper] apfmon messages muted
[2025-10-12 17:14:07] 2025-10-12 21:14:07,153 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:14:07] 2025-10-12 21:14:07,155 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:14:07]  *** Error codes and diagnostics ***
[2025-10-12 17:14:07]     "exeErrorCode": 0,
[2025-10-12 17:14:07]     "exeErrorDiag": "",
[2025-10-12 17:14:07]     "pilotErrorCode": 0,
[2025-10-12 17:14:07]     "pilotErrorDiag": "",
[2025-10-12 17:14:07]  *** Listing of results directory ***
[2025-10-12 17:14:07] total 413632
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:42 pilot3.tar.gz
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:47 queuedata.json
[2025-10-12 17:14:07] -rwx------ 1 boincer umatlas     36292 Oct 12 12:47 runpilot2-wrapper.sh
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:14:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:12 run_atlas
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:12 job.xml
[2025-10-12 17:14:07] -rw-r--r-- 2 boincer umatlas 220473628 Oct 12 14:12 EVNT.46676267._004786.pool.root.1
[2025-10-12 17:14:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:12 start_atlas.sh
[2025-10-12 17:14:07] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:12 shared
[2025-10-12 17:14:07] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 14:12 input.tar.gz
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:12 boinc_lockfile
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 14:12 pandaJob.out
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas    975528 Oct 12 14:12 agis_schedconf.cvmfs.json
[2025-10-12 17:14:07] drwx------ 5 boincer umatlas      4096 Oct 12 14:12 pilot3
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 17:09 init_data.xml
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas 195289630 Oct 12 17:12 HITS.46676269._083984.pool.root.1
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas       530 Oct 12 17:13 boinc_task_state.xml
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas        95 Oct 12 17:13 pilot_heartbeat.json
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas      1054 Oct 12 17:13 memory_monitor_summary.json
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas   1560580 Oct 12 17:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas    427483 Oct 12 17:13 log.46676269._083984.job.log.tgz.1
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas      7855 Oct 12 17:13 heartbeat.json
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:13 boinc_mmap_file
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas        28 Oct 12 17:13 wrapper_checkpoint.txt
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas       819 Oct 12 17:14 pilotlog.txt
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas   1522755 Oct 12 17:14 log.46676269._083984.job.log.1
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas       357 Oct 12 17:14 output.list
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:14 runtime_log
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas   1966080 Oct 12 17:14 result.tar.gz
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 17:14 runtime_log.err
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas       661 Oct 12 17:14 0lYLDmRPES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEjkNDmqXDhTo.diag
[2025-10-12 17:14:07] -rw-r--r-- 1 boincer umatlas     21089 Oct 12 17:14 stderr.txt
[2025-10-12 17:14:07] HITS file was successfully produced:
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas 195289630 Oct 12 17:12 shared/HITS.pool.root.1
[2025-10-12 17:14:07]  *** Contents of shared directory: ***
[2025-10-12 17:14:07] total 408524
[2025-10-12 17:14:07] -rw-r--r-- 2 boincer umatlas 220473628 Oct 12 14:12 ATLAS.root_0
[2025-10-12 17:14:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:12 start_atlas.sh
[2025-10-12 17:14:07] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 14:12 input.tar.gz
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas 195289630 Oct 12 17:12 HITS.pool.root.1
[2025-10-12 17:14:07] -rw------- 1 boincer umatlas   1966080 Oct 12 17:14 result.tar.gz
17:14:08 (31258): run_atlas exited; CPU time 82392.706748
17:14:08 (31258): called boinc_finish(0)

</stderr_txt>
]]>

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