Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:55:30 (3392431): wrapper (7.7.26015): starting
05:55:30 (3392431): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 05:55:30] Arguments: --nthreads 3
[2025-10-13 05:55:30] Threads: 3
[2025-10-13 05:55:30] Checking for CVMFS
[2025-10-13 05:55:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:55:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:55:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:55:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:55:31] 2.9.2.0 1793182 5204 83332 151647 1 57 28660067 36864000 0 130560 0 4200823 99.991 180007 674 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 05:55:31] CVMFS is ok
[2025-10-13 05:55:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:55:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:55:31] Further information can be found at the LHC@home message board.
[2025-10-13 05:55:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:55:31] Checking for apptainer binary...
[2025-10-13 05:55:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:55:31] Running /usr/bin/apptainer --version
[2025-10-13 05:55:31] apptainer version 1.4.1-1.1
[2025-10-13 05:55:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:55:31] magicA252
[2025-10-13 05:55:31] apptainer works
[2025-10-13 05:55:31] Set ATHENA_PROC_NUMBER=3
[2025-10-13 05:55:31] Set ATHENA_CORE_NUMBER=3
[2025-10-13 05:55:31] Starting ATLAS job with PandaID=6840223471
[2025-10-13 05:55:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:13:49]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:13:49] 2025-10-13 05:12:58,058 | INFO     | all job control threads have been joined
[2025-10-13 07:13:49] 2025-10-13 05:12:58,268 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:12:58,455 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:12:58,534 | INFO     | [job] validate thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:12:58,538 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:12:58,639 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:12:58,920 | INFO     | [payload] control thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:12:58,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:13:49] 2025-10-13 05:12:58,929 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:12:59,041 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:12:59,059 | INFO     | [job] control thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:13:02,929 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:13:49] 2025-10-13 05:13:27,506 | INFO     | PID=3396154 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:13:49] 2025-10-13 05:13:27,507 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:13:49] 2025-10-13 05:13:27,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:13:49] 2025-10-13 05:13:27,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:13:49] 2025-10-13 05:13:42,996 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:13:49] 2025-10-13 05:13:44,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086960817984)>', '<ExcThread(monitor, started 140085727065856)>']
[2025-10-13 07:13:49] 2025-10-13 05:13:44,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:13:49] 2025-10-13 05:13:44,597 | INFO     | [monitor] control thread has ended
[2025-10-13 07:13:49] 2025-10-13 05:13:49,092 | INFO     | all workflow threads have been joined
[2025-10-13 07:13:49] 2025-10-13 05:13:49,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:13:49] 2025-10-13 05:13:49,092 | INFO     | traces error code: 0
[2025-10-13 07:13:49] 2025-10-13 05:13:49,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:13:49] 2025-10-13 05:13:49,145 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:13:49] 2025-10-13 05:13:49,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:13:49] 2025-10-13 05:13:49,150 [wrapper] pilotpid: 3396154
[2025-10-13 07:13:49] 2025-10-13 05:13:49,153 [wrapper] Pilot exit status: 0
[2025-10-13 07:13:49] 2025-10-13 05:13:49,160 [wrapper] pandaids: 6840223471
[2025-10-13 07:13:49] 2025-10-13 05:13:49,178 [wrapper] cleanup supervisor_pilot 3414548 3396155
[2025-10-13 07:13:49] 2025-10-13 05:13:49,181 [wrapper] Test setup, not cleaning
[2025-10-13 07:13:49] 2025-10-13 05:13:49,183 [wrapper] apfmon messages muted
[2025-10-13 07:13:49] 2025-10-13 05:13:49,186 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:13:49] 2025-10-13 05:13:49,188 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:13:49]  *** Error codes and diagnostics ***
[2025-10-13 07:13:49]     "exeErrorCode": 0,
[2025-10-13 07:13:49]     "exeErrorDiag": "",
[2025-10-13 07:13:49]     "pilotErrorCode": 0,
[2025-10-13 07:13:49]     "pilotErrorDiag": "",
[2025-10-13 07:13:49]  *** Listing of results directory ***
[2025-10-13 07:13:49] total 402940
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc      5112 Oct 12 17:04 queuedata.json
[2025-10-13 07:13:49] -rwx------ 1 boinc boinc     36292 Oct 12 17:04 runpilot2-wrapper.sh
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:13:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:55 run_atlas
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:55 job.xml
[2025-10-13 07:13:49] -rw-r--r-- 2 boinc boinc 218909948 Oct 13 05:55 EVNT.46676267._004545.pool.root.1
[2025-10-13 07:13:49] -rw-r--r-- 2 boinc boinc    569682 Oct 13 05:55 input.tar.gz
[2025-10-13 07:13:49] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:55 start_atlas.sh
[2025-10-13 07:13:49] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:55 shared
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:55 boinc_setup_complete
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc      6448 Oct 13 05:55 init_data.xml
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:55 boinc_lockfile
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:55 pandaJob.out
[2025-10-13 07:13:49] -rw------- 1 boinc boinc    974373 Oct 13 05:55 agis_schedconf.cvmfs.json
[2025-10-13 07:13:49] -rw------- 1 boinc boinc   1560580 Oct 13 05:55 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:13:49] drwx------ 5 boinc boinc      4096 Oct 13 05:55 pilot3
[2025-10-13 07:13:49] -rw------- 1 boinc boinc 187929489 Oct 13 07:12 HITS.46676269._081580.pool.root.1
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc       529 Oct 13 07:12 boinc_task_state.xml
[2025-10-13 07:13:49] -rw------- 1 boinc boinc      1019 Oct 13 07:12 memory_monitor_summary.json
[2025-10-13 07:13:49] -rw------- 1 boinc boinc    256608 Oct 13 07:12 log.46676269._081580.job.log.tgz.1
[2025-10-13 07:13:49] -rw------- 1 boinc boinc      7757 Oct 13 07:12 heartbeat.json
[2025-10-13 07:13:49] -rw------- 1 boinc boinc        95 Oct 13 07:13 pilot_heartbeat.json
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:13 wrapper_checkpoint.txt
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:13 boinc_mmap_file
[2025-10-13 07:13:49] -rw------- 1 boinc boinc      4938 Oct 13 07:13 pilotlog.txt
[2025-10-13 07:13:49] -rw------- 1 boinc boinc    684585 Oct 13 07:13 log.46676269._081580.job.log.1
[2025-10-13 07:13:49] -rw------- 1 boinc boinc       357 Oct 13 07:13 output.list
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:13 runtime_log
[2025-10-13 07:13:49] -rw------- 1 boinc boinc    962560 Oct 13 07:13 result.tar.gz
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc      8792 Oct 13 07:13 runtime_log.err
[2025-10-13 07:13:49] -rw------- 1 boinc boinc       661 Oct 13 07:13 LTQNDmknCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBCUMDmwhxP7n.diag
[2025-10-13 07:13:49] -rw-r--r-- 1 boinc boinc      5939 Oct 13 07:13 stderr.txt
[2025-10-13 07:13:49] HITS file was successfully produced:
[2025-10-13 07:13:49] -rw------- 1 boinc boinc 187929489 Oct 13 07:12 shared/HITS.pool.root.1
[2025-10-13 07:13:49]  *** Contents of shared directory: ***
[2025-10-13 07:13:49] total 398832
[2025-10-13 07:13:49] -rw-r--r-- 2 boinc boinc 218909948 Oct 13 05:55 ATLAS.root_0
[2025-10-13 07:13:49] -rw-r--r-- 2 boinc boinc    569682 Oct 13 05:55 input.tar.gz
[2025-10-13 07:13:49] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:55 start_atlas.sh
[2025-10-13 07:13:49] -rw------- 1 boinc boinc 187929489 Oct 13 07:12 HITS.pool.root.1
[2025-10-13 07:13:49] -rw------- 1 boinc boinc    962560 Oct 13 07:13 result.tar.gz
07:13:50 (3392431): run_atlas exited; CPU time 13263.788828
07:13:50 (3392431): called boinc_finish(0)

</stderr_txt>
]]>

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