Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
20:09:57 (2650972): wrapper (7.7.26015): starting
20:09:57 (2650972): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:09:57] Arguments: --nthreads 8
[2025-10-12 20:09:57] Threads: 8
[2025-10-12 20:09:57] Checking for CVMFS
[2025-10-12 20:09:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:09:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:09:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:09:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:09:58] 2.13.2.0 8166 1919 59820 151631 0 188 3262856 4096000 6269 130560 0 6853503 99.998 73477 367 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 20:09:58] CVMFS is ok
[2025-10-12 20:09:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:09:58] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 20:09:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 20:09:58] Further information can be found at the LHC@home message board.
[2025-10-12 20:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:09:58] Checking for apptainer binary...
[2025-10-12 20:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:09:58] Running /usr/bin/apptainer --version
[2025-10-12 20:09:58] apptainer version 1.4.2
[2025-10-12 20:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:09:58] JM7
[2025-10-12 20:09:58] apptainer works
[2025-10-12 20:09:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:09:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:09:58] Starting ATLAS job with PandaID=6840392540
[2025-10-12 20:09:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:07:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:07:28] 2025-10-12 20:06:42,711 | INFO     | PID=2654947 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:07:28] 2025-10-12 20:06:42,711 | INFO     | .. there are 5 such processes running
[2025-10-12 22:07:28] 2025-10-12 20:06:42,895 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:07:28] 2025-10-12 20:06:42,907 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 1814.502015625
[2025-10-12 22:07:28] 2025-10-12 20:06:42,920 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6840392540/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:07:28] 2025-10-12 20:06:42,920 | INFO     | extracted standard info from prmon json
[2025-10-12 22:07:28] 2025-10-12 20:06:42,921 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:07:28] 2025-10-12 20:06:42,921 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:07:28] 2025-10-12 20:06:42,921 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:07:28] 2025-10-12 20:06:42,921 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:07:28] 2025-10-12 20:06:42,924 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:07:28] 2025-10-12 20:06:42,924 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 22:07:28] 2025-10-12 20:06:42,925 | INFO     | sum of deviations: 11221906571.499996
[2025-10-12 22:07:28] 2025-10-12 20:06:42,925 | INFO     | mean x: 1760296084.5
[2025-10-12 22:07:28] 2025-10-12 20:06:42,925 | INFO     | mean y: 2480760.8684210526
[2025-10-12 22:07:28] 2025-10-12 20:06:42,925 | INFO     | -- intersect: -42999930908.95799
[2025-10-12 22:07:28] 2025-10-12 20:06:42,926 | INFO     | intersect: -42999930908.95799
[2025-10-12 22:07:28] 2025-10-12 20:06:42,926 | INFO     | chi2: 1.6449577895193581
[2025-10-12 22:07:28] 2025-10-12 20:06:42,926 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 22:07:28] 2025-10-12 20:06:42,927 | INFO     | sum of deviations: 10717218100.000008
[2025-10-12 22:07:28] 2025-10-12 20:06:42,927 | INFO     | mean x: 1760295932.0
[2025-10-12 22:07:28] 2025-10-12 20:06:42,927 | INFO     | mean y: 2479429.1926605506
[2025-10-12 22:07:28] 2025-10-12 20:06:42,927 | INFO     | -- intersect: -46981131520.815384
[2025-10-12 22:07:28] 2025-10-12 20:06:42,927 | INFO     | intersect: -46981131520.815384
[2025-10-12 22:07:28] 2025-10-12 20:06:42,928 | INFO     | chi2: 1.6483349276083048
[2025-10-12 22:07:28] 2025-10-12 20:06:42,928 | INFO     | current chi2=1.6483349276083048 (change=-0.2053024162968616 %)
[2025-10-12 22:07:28] 2025-10-12 20:06:42,928 | INFO     | right removable region: 108
[2025-10-12 22:07:28] 2025-10-12 20:06:42,928 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 22:07:28] 2025-10-12 20:06:42,929 | INFO     | sum of deviations: -7573746031.000001
[2025-10-12 22:07:28] 2025-10-12 20:06:42,929 | INFO     | mean x: 1760296237.0
[2025-10-12 22:07:28] 2025-10-12 20:06:42,929 | INFO     | mean y: 2529450.2935779816
[2025-10-12 22:07:28] 2025-10-12 20:06:42,929 | INFO     | -- intersect: 33205362059.4475
[2025-10-12 22:07:28] 2025-10-12 20:06:42,929 | INFO     | intersect: 33205362059.4475
[2025-10-12 22:07:28] 2025-10-12 20:06:42,930 | INFO     | chi2: 0.033458465508501116
[2025-10-12 22:07:28] 2025-10-12 20:06:42,930 | INFO     | current chi2=0.033458465508501116 (change=97.96599853676018 %)
[2025-10-12 22:07:28] 2025-10-12 20:06:42,930 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 22:07:28] 2025-10-12 20:06:42,931 | INFO     | sum of deviations: -6732792406.0
[2025-10-12 22:07:28] 2025-10-12 20:06:42,931 | INFO     | mean x: 1760296389.5
[2025-10-12 22:07:28] 2025-10-12 20:06:42,931 | INFO     | mean y: 2526995.923076923
[2025-10-12 22:07:28] 2025-10-12 20:06:42,931 | INFO     | -- intersect: 33984041837.078453
[2025-10-12 22:07:28] 2025-10-12 20:06:42,931 | INFO     | intersect: 33984041837.078453
[2025-10-12 22:07:28] 2025-10-12 20:06:42,932 | INFO     | chi2: 0.03308549461853266
[2025-10-12 22:07:28] 2025-10-12 20:06:42,932 | INFO     | current chi2=0.03308549461853266 (change=1.1147280196507787 %)
[2025-10-12 22:07:28] 2025-10-12 20:06:42,932 | INFO     | left removable region: 20
[2025-10-12 22:07:28] 2025-10-12 20:06:42,932 | INFO     | sum of square deviations: 211285822.0
[2025-10-12 22:07:28] 2025-10-12 20:06:42,933 | INFO     | sum of deviations: -3543229163.9999995
[2025-10-12 22:07:28] 2025-10-12 20:06:42,933 | INFO     | mean x: 1760296511.5
[2025-10-12 22:07:28] 2025-10-12 20:06:42,933 | INFO     | mean y: 2517146.0681818184
[2025-10-12 22:07:28] 2025-10-12 20:06:42,933 | INFO     | -- intersect: 29522405786.93619
[2025-10-12 22:07:28] 2025-10-12 20:06:42,933 | INFO     | intersect: 29522405786.93619
[2025-10-12 22:07:28] 2025-10-12 20:06:42,933 | INFO     | chi2: 0.027870960224952675
[2025-10-12 22:07:28] 2025-10-12 20:06:42,934 | INFO     | -- intersect: 29522405786.93619
[2025-10-12 22:07:28] 2025-10-12 20:06:42,934 | INFO     | current memory leak: -16.77 B/s (using 88 data points, chi2=0.03)
[2025-10-12 22:07:28] 2025-10-12 20:06:42,934 | INFO     | could have reported an average CPU frequency of 2204 MHz (7 samples)
[2025-10-12 22:07:28] 2025-10-12 20:06:42,934 | INFO     | ..............................
[2025-10-12 22:07:28] 2025-10-12 20:06:42,935 | INFO     | . Timing measurements:
[2025-10-12 22:07:28] 2025-10-12 20:06:42,935 | INFO     | . get job = 0 s
[2025-10-12 22:07:28] 2025-10-12 20:06:42,935 | INFO     | . initial setup = 2 s
[2025-10-12 22:07:28] 2025-10-12 20:06:42,935 | INFO     | . payload setup = 5 s
[2025-10-12 22:07:28] 2025-10-12 20:06:42,935 | INFO     | . stage-in = 0 s
[2025-10-12 22:07:28] 2025-10-12 20:06:42,935 | INFO     | . payload execution = 6957 s
[2025-10-12 22:07:28] 2025-10-12 20:06:42,935 | INFO     | . stage-out = 0 s
[2025-10-12 22:07:28] 2025-10-12 20:06:42,935 | INFO     | . log creation = 0 s
[2025-10-12 22:07:28] 2025-10-12 20:06:42,935 | INFO     | ..............................
[2025-10-12 22:07:28] 2025-10-12 20:06:43,020 | INFO     | 
[2025-10-12 22:07:28] 2025-10-12 20:06:43,021 | INFO     | job summary report
[2025-10-12 22:07:28] 2025-10-12 20:06:43,021 | INFO     | --------------------------------------------------
[2025-10-12 22:07:28] 2025-10-12 20:06:43,021 | INFO     | PanDA job id: 6840392540
[2025-10-12 22:07:28] 2025-10-12 20:06:43,021 | INFO     | task id: 46676269
[2025-10-12 22:07:28] 2025-10-12 20:06:43,021 | INFO     | errors: (none)
[2025-10-12 22:07:28] 2025-10-12 20:06:43,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:07:28] 2025-10-12 20:06:43,021 | INFO     | pilot state: finished 
[2025-10-12 22:07:28] 2025-10-12 20:06:43,021 | INFO     | transexitcode: 0
[2025-10-12 22:07:28] 2025-10-12 20:06:43,022 | INFO     | exeerrorcode: 0
[2025-10-12 22:07:28] 2025-10-12 20:06:43,022 | INFO     | exeerrordiag: 
[2025-10-12 22:07:28] 2025-10-12 20:06:43,022 | INFO     | exitcode: 0
[2025-10-12 22:07:28] 2025-10-12 20:06:43,022 | INFO     | exitmsg: OK
[2025-10-12 22:07:28] 2025-10-12 20:06:43,022 | INFO     | cpuconsumptiontime: 52277 s
[2025-10-12 22:07:28] 2025-10-12 20:06:43,022 | INFO     | nevents: 400
[2025-10-12 22:07:28] 2025-10-12 20:06:43,022 | INFO     | neventsw: 0
[2025-10-12 22:07:28] 2025-10-12 20:06:43,023 | INFO     | pid: 2661806
[2025-10-12 22:07:28] 2025-10-12 20:06:43,023 | INFO     | pgrp: 2661806
[2025-10-12 22:07:28] 2025-10-12 20:06:43,023 | INFO     | corecount: 8
[2025-10-12 22:07:28] 2025-10-12 20:06:43,023 | INFO     | event service: False
[2025-10-12 22:07:28] 2025-10-12 20:06:43,023 | INFO     | sizes: {0: 2348637, 1: 2348892, 5: 2349154, 12: 2349210, 6967: 2376662, 6968: 2385674, 6971: 2385858, 6976: 2386052}
[2025-10-12 22:07:28] 2025-10-12 20:06:43,023 | INFO     | --------------------------------------------------
[2025-10-12 22:07:28] 2025-10-12 20:06:43,023 | INFO     | 
[2025-10-12 22:07:28] 2025-10-12 20:06:43,023 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-10-12 22:07:28] 2025-10-12 20:06:43,039 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,040 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,040 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,040 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,040 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,040 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,041 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,041 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,041 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,041 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,041 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,042 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:07:28] 2025-10-12 20:06:43,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,042 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:07:28] 2025-10-12 20:06:43,043 | INFO     | job 6840392540 has completed (purged errors)
[2025-10-12 22:07:28] 2025-10-12 20:06:43,043 | INFO     | overall cleanup function is called
[2025-10-12 22:07:28] 2025-10-12 20:06:44,052 | INFO     | --- collectZombieJob: --- 10, [2661806]
[2025-10-12 22:07:28] 2025-10-12 20:06:44,052 | INFO     | zombie collector waiting for pid 2661806
[2025-10-12 22:07:28] 2025-10-12 20:06:44,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:07:28] 2025-10-12 20:06:44,052 | INFO     | collected zombie processes
[2025-10-12 22:07:28] 2025-10-12 20:06:44,053 | INFO     | will attempt to kill all subprocesses of pid=2661806
[2025-10-12 22:07:28] 2025-10-12 20:06:44,304 | INFO     | process IDs to be killed: [2661806] (in reverse order)
[2025-10-12 22:07:28] 2025-10-12 20:06:44,363 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:07:28] 2025-10-12 20:06:44,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:07:28] 2025-10-12 20:06:44,371 | INFO     | did not find any defunct processes belonging to 2661806
[2025-10-12 22:07:28] 2025-10-12 20:06:44,377 | INFO     | did not find any defunct processes belonging to 2661806
[2025-10-12 22:07:28] 2025-10-12 20:06:44,378 | INFO     | ready for new job
[2025-10-12 22:07:28] 2025-10-12 20:06:44,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:07:28] 2025-10-12 20:06:44,380 | INFO     | ***************************************
[2025-10-12 22:07:28] 2025-10-12 20:06:44,380 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:07:28] 2025-10-12 20:06:44,380 | INFO     | ***************************************
[2025-10-12 22:07:28] 2025-10-12 20:06:44,381 | INFO     | 
[2025-10-12 22:07:28] 2025-10-12 20:06:44,384 | INFO     | architecture information:
[2025-10-12 22:07:28] 2025-10-12 20:06:44,384 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:07:28] 2025-10-12 20:06:44,398 | INFO     | cat /etc/os-release:
[2025-10-12 22:07:28] NAME="CentOS Linux"
[2025-10-12 22:07:28] VERSION="7 (Core)"
[2025-10-12 22:07:28] ID="centos"
[2025-10-12 22:07:28] ID_LIKE="rhel fedora"
[2025-10-12 22:07:28] VERSION_ID="7"
[2025-10-12 22:07:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:07:28] ANSI_COLOR="0;31"
[2025-10-12 22:07:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:07:28] HOME_URL="https://www.centos.org/"
[2025-10-12 22:07:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:07:28] 
[2025-10-12 22:07:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:07:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:07:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:07:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:07:28] 
[2025-10-12 22:07:28] 2025-10-12 20:06:44,398 | INFO     | ***************************************
[2025-10-12 22:07:28] 2025-10-12 20:06:44,901 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-10-12 22:07:28] 2025-10-12 20:06:44,915 | INFO     | sufficient remaining disk space (219299184640 B)
[2025-10-12 22:07:28] 2025-10-12 20:06:44,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:07:28] 2025-10-12 20:06:44,916 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:07:28] 2025-10-12 20:06:44,917 | INFO     | update_server=False
[2025-10-12 22:07:28] 2025-10-12 20:06:44,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:07:28] 2025-10-12 20:06:44,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:07:28] 2025-10-12 20:06:44,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:07:28] 2025-10-12 20:06:44,993 | INFO     | all data control threads have been joined
[2025-10-12 22:07:28] 2025-10-12 20:06:45,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:07:28] 2025-10-12 20:06:45,028 | INFO     | aborting loop
[2025-10-12 22:07:28] 2025-10-12 20:06:45,473 | INFO     | all payload control threads have been joined
[2025-10-12 22:07:28] 2025-10-12 20:06:45,634 | INFO     | all job control threads have been joined
[2025-10-12 22:07:28] 2025-10-12 20:06:45,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:07:28] 2025-10-12 20:06:45,922 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:45,923 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:45,999 | INFO     | [data] control thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:46,015 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:46,029 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:46,231 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:46,428 | INFO     | [job] validate thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:46,478 | INFO     | [payload] control thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:46,639 | INFO     | [job] control thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:46,790 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:46,987 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:46,992 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:47,274 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:47,913 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:48,923 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:06:55,197 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:07:28] 2025-10-12 20:06:56,202 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:07:28] 2025-10-12 20:07:15,134 | INFO     | PID=2654947 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:07:28] 2025-10-12 20:07:15,135 | INFO     | .. there are 5 such processes running
[2025-10-12 22:07:28] 2025-10-12 20:07:15,135 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:07:28] 2025-10-12 20:07:15,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:07:28] 2025-10-12 20:07:15,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:07:28] 2025-10-12 20:07:22,451 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:07:28] 2025-10-12 20:07:23,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126300441958208)>', '<ExcThread(monitor, started 126299662173952)>']
[2025-10-12 22:07:28] 2025-10-12 20:07:24,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:07:28] 2025-10-12 20:07:24,178 | INFO     | [monitor] control thread has ended
[2025-10-12 22:07:28] 2025-10-12 20:07:28,459 | INFO     | all workflow threads have been joined
[2025-10-12 22:07:28] 2025-10-12 20:07:28,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:07:28] 2025-10-12 20:07:28,460 | INFO     | traces error code: 0
[2025-10-12 22:07:28] 2025-10-12 20:07:28,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:07:28] 2025-10-12 20:07:28,571 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:07:28] 2025-10-12 20:07:28,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:07:28] 2025-10-12 20:07:28,578 [wrapper] pilotpid: 2654947
[2025-10-12 22:07:28] 2025-10-12 20:07:28,581 [wrapper] Pilot exit status: 0
[2025-10-12 22:07:28] 2025-10-12 20:07:28,591 [wrapper] pandaids: 6840392540
[2025-10-12 22:07:28] 2025-10-12 20:07:28,633 [wrapper] cleanup supervisor_pilot 2764487 2654948
[2025-10-12 22:07:28] 2025-10-12 20:07:28,636 [wrapper] Test setup, not cleaning
[2025-10-12 22:07:28] 2025-10-12 20:07:28,639 [wrapper] apfmon messages muted
[2025-10-12 22:07:28] 2025-10-12 20:07:28,643 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:07:28] 2025-10-12 20:07:28,645 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:07:28]  *** Error codes and diagnostics ***
[2025-10-12 22:07:28]     "exeErrorCode": 0,
[2025-10-12 22:07:28]     "exeErrorDiag": "",
[2025-10-12 22:07:28]     "pilotErrorCode": 0,
[2025-10-12 22:07:28]     "pilotErrorDiag": "",
[2025-10-12 22:07:28]  *** Listing of results directory ***
[2025-10-12 22:07:28] total 410904
[2025-10-12 22:07:28] -rw-r--r-- 1 josemi7 josemi7    557409 oct 12 18:42 pilot3.tar.gz
[2025-10-12 22:07:28] -rwx------ 1 josemi7 josemi7     36292 oct 12 18:45 runpilot2-wrapper.sh
[2025-10-12 22:07:28] -rw-r--r-- 1 josemi7 josemi7      5112 oct 12 18:45 queuedata.json
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7       100 oct 12 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:07:28] -rwxr-xr-x 1 josemi7 josemi7      7986 oct 12 20:09 run_atlas
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7       105 oct 12 20:09 job.xml
[2025-10-12 22:07:28] -rw-r--r-- 2 josemi7 josemi7 223149630 oct 12 20:09 EVNT.46676267._004787.pool.root.1
[2025-10-12 22:07:28] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 20:09 start_atlas.sh
[2025-10-12 22:07:28] drwxrwx--x 1 josemi7 josemi7        76 oct 12 20:09 shared
[2025-10-12 22:07:28] -rw-r--r-- 2 josemi7 josemi7    569675 oct 12 20:09 input.tar.gz
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7      6165 oct 12 20:09 init_data.xml
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 20:09 boinc_setup_complete
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 20:09 boinc_lockfile
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7      2550 oct 12 20:09 pandaJob.out
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7    975528 oct 12 20:10 agis_schedconf.cvmfs.json
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7   1560580 oct 12 20:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:07:28] drwx------ 1 josemi7 josemi7       414 oct 12 20:10 pilot3
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7       530 oct 12 22:06 boinc_task_state.xml
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7 191001161 oct 12 22:06 HITS.46676269._084001.pool.root.1
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7        95 oct 12 22:06 pilot_heartbeat.json
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7      1041 oct 12 22:06 memory_monitor_summary.json
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7    362214 oct 12 22:06 log.46676269._084001.job.log.tgz.1
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7      7771 oct 12 22:06 heartbeat.json
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7        27 oct 12 22:07 wrapper_checkpoint.txt
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7      8192 oct 12 22:07 boinc_mmap_file
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7      4903 oct 12 22:07 pilotlog.txt
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7    999944 oct 12 22:07 log.46676269._084001.job.log.1
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7       357 oct 12 22:07 output.list
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7       620 oct 12 22:07 runtime_log
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7   1382400 oct 12 22:07 result.tar.gz
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7      8729 oct 12 22:07 runtime_log.err
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7       639 oct 12 22:07 kE1NDmINES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmSUMDmkznCDn.diag
[2025-10-12 22:07:28] -rw-rw-r-- 1 josemi7 josemi7     21240 oct 12 22:07 stderr.txt
[2025-10-12 22:07:28] HITS file was successfully produced:
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7 191001161 oct 12 22:06 shared/HITS.pool.root.1
[2025-10-12 22:07:28]  *** Contents of shared directory: ***
[2025-10-12 22:07:28] total 406376
[2025-10-12 22:07:28] -rw-r--r-- 2 josemi7 josemi7 223149630 oct 12 20:09 ATLAS.root_0
[2025-10-12 22:07:28] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 20:09 start_atlas.sh
[2025-10-12 22:07:28] -rw-r--r-- 2 josemi7 josemi7    569675 oct 12 20:09 input.tar.gz
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7 191001161 oct 12 22:06 HITS.pool.root.1
[2025-10-12 22:07:28] -rw------- 1 josemi7 josemi7   1382400 oct 12 22:07 result.tar.gz
22:07:30 (2650972): run_atlas exited; CPU time 52506.542225
22:07:30 (2650972): called boinc_finish(0)

</stderr_txt>
]]>

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