Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
21:34:11 (2719455): wrapper (7.7.26015): starting
21:34:11 (2719455): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:34:11] Arguments: --nthreads 8
[2025-10-12 21:34:11] Threads: 8
[2025-10-12 21:34:11] Checking for CVMFS
[2025-10-12 21:34:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:34:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:34:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:34:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:34:12] 2.13.2.0 8166 2003 58984 151635 0 57 3269081 4096000 6377 130560 0 7030703 99.998 76074 368 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 21:34:12] CVMFS is ok
[2025-10-12 21:34:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:34:12] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 21:34:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 21:34:12] Further information can be found at the LHC@home message board.
[2025-10-12 21:34:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:34:12] Checking for apptainer binary...
[2025-10-12 21:34:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:34:12] Running /usr/bin/apptainer --version
[2025-10-12 21:34:12] apptainer version 1.4.2
[2025-10-12 21:34:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:34:12] JM7
[2025-10-12 21:34:12] apptainer works
[2025-10-12 21:34:12] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:34:12] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:34:12] Starting ATLAS job with PandaID=6840392405
[2025-10-12 21:34:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:46:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:46:36]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6840392405/log.46676269._083866.job.log.tgz.1
[2025-10-12 22:46:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/6c/log.46676269._083866.job.log.tgz.1
[2025-10-12 22:46:36]  workdir=None
[2025-10-12 22:46:36] ]
[2025-10-12 22:46:36] 2025-10-12 20:45:30,349 | INFO     | transferring file log.46676269._083866.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6840392405/log.46676269._083866.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 22:46:36] 2025-10-12 20:45:30,349 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6840392405/log.46676269._083866.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.466762
[2025-10-12 22:46:36] 2025-10-12 20:45:30,366 | INFO     | adding to output.list: log.46676269._083866.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/6c/log.46676269._083866.job.log.tg
[2025-10-12 22:46:36] 2025-10-12 20:45:30,367 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:46:36] 2025-10-12 20:45:30,367 | INFO     | summary of transferred files:
[2025-10-12 22:46:36] 2025-10-12 20:45:30,367 | INFO     |  -- lfn=log.46676269._083866.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:46:36] 2025-10-12 20:45:30,367 | INFO     | stage-out finished correctly
[2025-10-12 22:46:36] 2025-10-12 20:45:30,571 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:46:36] 2025-10-12 20:45:31,361 | INFO     | monitor loop #317: job 0:6840392405 is in state 'finished'
[2025-10-12 22:46:36] 2025-10-12 20:45:31,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:46:36] 2025-10-12 20:45:32,241 | INFO     | job 6840392405 has state=finished
[2025-10-12 22:46:36] 2025-10-12 20:45:32,241 | INFO     | preparing for final server update for job 6840392405 in state='finished'
[2025-10-12 22:46:36] 2025-10-12 20:45:32,242 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:46:36] 2025-10-12 20:45:32,242 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:46:36] 2025-10-12 20:45:32,243 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:46:36] 2025-10-12 20:45:32,243 | INFO     | job 6840392405 has finished - writing final server update
[2025-10-12 22:46:36] 2025-10-12 20:45:32,243 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:46:36] 2025-10-12 20:45:32,245 | INFO     | executing command: lscpu
[2025-10-12 22:46:36] 2025-10-12 20:45:32,257 | INFO     | time since job start (4268s) is within the limit (172800.0s)
[2025-10-12 22:46:36] 2025-10-12 20:45:32,288 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:46:36] 2025-10-12 20:45:33,865 | INFO     | monitor loop #318: job 0:6840392405 is in state 'finished'
[2025-10-12 22:46:36] 2025-10-12 20:45:33,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:46:36] 2025-10-12 20:45:34,263 | INFO     | time since job start (4270s) is within the limit (172800.0s)
[2025-10-12 22:46:36] 2025-10-12 20:45:36,268 | INFO     | time since job start (4272s) is within the limit (172800.0s)
[2025-10-12 22:46:36] 2025-10-12 20:45:36,368 | INFO     | monitor loop #319: job 0:6840392405 is in state 'finished'
[2025-10-12 22:46:36] 2025-10-12 20:45:36,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:46:36] 2025-10-12 20:45:37,525 | INFO     | PID=2723425 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:46:36] 2025-10-12 20:45:37,525 | INFO     | .. there are 3 such processes running
[2025-10-12 22:46:36] 2025-10-12 20:45:38,526 | INFO     | time since job start (4274s) is within the limit (172800.0s)
[2025-10-12 22:46:36] 2025-10-12 20:45:38,871 | INFO     | monitor loop #320: job 0:6840392405 is in state 'finished'
[2025-10-12 22:46:36] 2025-10-12 20:45:38,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:46:36] 2025-10-12 20:45:40,532 | INFO     | time since job start (4276s) is within the limit (172800.0s)
[2025-10-12 22:46:36] 2025-10-12 20:45:41,188 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:46:36] 2025-10-12 20:45:41,201 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 1704.9622031250005
[2025-10-12 22:46:36] 2025-10-12 20:45:41,214 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6840392405/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:46:36] 2025-10-12 20:45:41,215 | INFO     | extracted standard info from prmon json
[2025-10-12 22:46:36] 2025-10-12 20:45:41,215 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:46:36] 2025-10-12 20:45:41,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:46:36] 2025-10-12 20:45:41,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:46:36] 2025-10-12 20:45:41,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:46:36] 2025-10-12 20:45:41,218 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:46:36] 2025-10-12 20:45:41,219 | INFO     | sum of square deviations: 77515872.0
[2025-10-12 22:46:36] 2025-10-12 20:45:41,219 | INFO     | sum of deviations: -7103998877.999998
[2025-10-12 22:46:36] 2025-10-12 20:45:41,219 | INFO     | mean x: 1760299887.0
[2025-10-12 22:46:36] 2025-10-12 20:45:41,219 | INFO     | mean y: 2615516.873015873
[2025-10-12 22:46:36] 2025-10-12 20:45:41,220 | INFO     | -- intersect: 161326588266.49936
[2025-10-12 22:46:36] 2025-10-12 20:45:41,220 | INFO     | intersect: 161326588266.49936
[2025-10-12 22:46:36] 2025-10-12 20:45:41,220 | INFO     | chi2: 0.05033715007232253
[2025-10-12 22:46:36] 2025-10-12 20:45:41,220 | INFO     | -- intersect: 161326588266.49936
[2025-10-12 22:46:36] 2025-10-12 20:45:41,220 | INFO     | current memory leak: -91.65 B/s (using 63 data points, chi2=0.05)
[2025-10-12 22:46:36] 2025-10-12 20:45:41,221 | INFO     | could have reported an average CPU frequency of 2211 MHz (6 samples)
[2025-10-12 22:46:36] 2025-10-12 20:45:41,221 | INFO     | ..............................
[2025-10-12 22:46:36] 2025-10-12 20:45:41,221 | INFO     | . Timing measurements:
[2025-10-12 22:46:36] 2025-10-12 20:45:41,221 | INFO     | . get job = 0 s
[2025-10-12 22:46:36] 2025-10-12 20:45:41,221 | INFO     | . initial setup = 2 s
[2025-10-12 22:46:36] 2025-10-12 20:45:41,221 | INFO     | . payload setup = 5 s
[2025-10-12 22:46:36] 2025-10-12 20:45:41,222 | INFO     | . stage-in = 0 s
[2025-10-12 22:46:36] 2025-10-12 20:45:41,222 | INFO     | . payload execution = 4238 s
[2025-10-12 22:46:36] 2025-10-12 20:45:41,222 | INFO     | . stage-out = 0 s
[2025-10-12 22:46:36] 2025-10-12 20:45:41,222 | INFO     | . log creation = 0 s
[2025-10-12 22:46:36] 2025-10-12 20:45:41,222 | INFO     | ..............................
[2025-10-12 22:46:36] 2025-10-12 20:45:41,303 | INFO     | 
[2025-10-12 22:46:36] 2025-10-12 20:45:41,304 | INFO     | job summary report
[2025-10-12 22:46:36] 2025-10-12 20:45:41,304 | INFO     | --------------------------------------------------
[2025-10-12 22:46:36] 2025-10-12 20:45:41,304 | INFO     | PanDA job id: 6840392405
[2025-10-12 22:46:36] 2025-10-12 20:45:41,304 | INFO     | task id: 46676269
[2025-10-12 22:46:36] 2025-10-12 20:45:41,304 | INFO     | errors: (none)
[2025-10-12 22:46:36] 2025-10-12 20:45:41,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:46:36] 2025-10-12 20:45:41,304 | INFO     | pilot state: finished 
[2025-10-12 22:46:36] 2025-10-12 20:45:41,305 | INFO     | transexitcode: 0
[2025-10-12 22:46:36] 2025-10-12 20:45:41,305 | INFO     | exeerrorcode: 0
[2025-10-12 22:46:36] 2025-10-12 20:45:41,305 | INFO     | exeerrordiag: 
[2025-10-12 22:46:36] 2025-10-12 20:45:41,305 | INFO     | exitcode: 0
[2025-10-12 22:46:36] 2025-10-12 20:45:41,305 | INFO     | exitmsg: OK
[2025-10-12 22:46:36] 2025-10-12 20:45:41,305 | INFO     | cpuconsumptiontime: 30512 s
[2025-10-12 22:46:36] 2025-10-12 20:45:41,305 | INFO     | nevents: 400
[2025-10-12 22:46:36] 2025-10-12 20:45:41,305 | INFO     | neventsw: 0
[2025-10-12 22:46:36] 2025-10-12 20:45:41,306 | INFO     | pid: 2730280
[2025-10-12 22:46:36] 2025-10-12 20:45:41,306 | INFO     | pgrp: 2730280
[2025-10-12 22:46:36] 2025-10-12 20:45:41,306 | INFO     | corecount: 8
[2025-10-12 22:46:36] 2025-10-12 20:45:41,306 | INFO     | event service: False
[2025-10-12 22:46:36] 2025-10-12 20:45:41,306 | INFO     | sizes: {0: 2348693, 1: 2348892, 5: 2349154, 12: 2349210, 4247: 2375254, 4249: 2384450, 4260: 2384588}
[2025-10-12 22:46:36] 2025-10-12 20:45:41,306 | INFO     | --------------------------------------------------
[2025-10-12 22:46:36] 2025-10-12 20:45:41,306 | INFO     | 
[2025-10-12 22:46:36] 2025-10-12 20:45:41,306 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-10-12 22:46:36] 2025-10-12 20:45:41,324 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,324 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,325 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,325 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:46:36] 2025-10-12 20:45:41,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:46:36] 2025-10-12 20:45:41,327 | INFO     | job 6840392405 has completed (purged errors)
[2025-10-12 22:46:36] 2025-10-12 20:45:41,328 | INFO     | overall cleanup function is called
[2025-10-12 22:46:36] 2025-10-12 20:45:42,337 | INFO     | --- collectZombieJob: --- 10, [2730280]
[2025-10-12 22:46:36] 2025-10-12 20:45:42,337 | INFO     | zombie collector waiting for pid 2730280
[2025-10-12 22:46:36] 2025-10-12 20:45:42,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:46:36] 2025-10-12 20:45:42,337 | INFO     | collected zombie processes
[2025-10-12 22:46:36] 2025-10-12 20:45:42,337 | INFO     | will attempt to kill all subprocesses of pid=2730280
[2025-10-12 22:46:36] 2025-10-12 20:45:42,623 | INFO     | process IDs to be killed: [2730280] (in reverse order)
[2025-10-12 22:46:36] 2025-10-12 20:45:42,679 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:46:36] 2025-10-12 20:45:42,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:46:36] 2025-10-12 20:45:42,687 | INFO     | did not find any defunct processes belonging to 2730280
[2025-10-12 22:46:36] 2025-10-12 20:45:42,695 | INFO     | did not find any defunct processes belonging to 2730280
[2025-10-12 22:46:36] 2025-10-12 20:45:42,695 | INFO     | ready for new job
[2025-10-12 22:46:36] 2025-10-12 20:45:42,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:46:36] 2025-10-12 20:45:42,698 | INFO     | ***************************************
[2025-10-12 22:46:36] 2025-10-12 20:45:42,698 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:46:36] 2025-10-12 20:45:42,698 | INFO     | ***************************************
[2025-10-12 22:46:36] 2025-10-12 20:45:42,699 | INFO     | 
[2025-10-12 22:46:36] 2025-10-12 20:45:42,702 | INFO     | architecture information:
[2025-10-12 22:46:36] 2025-10-12 20:45:42,703 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:46:36] 2025-10-12 20:45:42,716 | INFO     | cat /etc/os-release:
[2025-10-12 22:46:36] NAME="CentOS Linux"
[2025-10-12 22:46:36] VERSION="7 (Core)"
[2025-10-12 22:46:36] ID="centos"
[2025-10-12 22:46:36] ID_LIKE="rhel fedora"
[2025-10-12 22:46:36] VERSION_ID="7"
[2025-10-12 22:46:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:46:36] ANSI_COLOR="0;31"
[2025-10-12 22:46:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:46:36] HOME_URL="https://www.centos.org/"
[2025-10-12 22:46:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:46:36] 
[2025-10-12 22:46:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:46:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:46:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:46:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:46:36] 
[2025-10-12 22:46:36] 2025-10-12 20:45:42,717 | INFO     | ***************************************
[2025-10-12 22:46:36] 2025-10-12 20:45:43,220 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-10-12 22:46:36] 2025-10-12 20:45:43,235 | INFO     | sufficient remaining disk space (220212494336 B)
[2025-10-12 22:46:36] 2025-10-12 20:45:43,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:46:36] 2025-10-12 20:45:43,236 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:46:36] 2025-10-12 20:45:43,236 | INFO     | update_server=False
[2025-10-12 22:46:36] 2025-10-12 20:45:43,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:46:36] 2025-10-12 20:45:43,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:46:36] 2025-10-12 20:45:43,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:46:36] 2025-10-12 20:45:43,237 | INFO     | aborting loop
[2025-10-12 22:46:36] 2025-10-12 20:45:43,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:46:36] 2025-10-12 20:45:44,203 | INFO     | all payload control threads have been joined
[2025-10-12 22:46:36] 2025-10-12 20:45:44,203 | INFO     | all data control threads have been joined
[2025-10-12 22:46:36] 2025-10-12 20:45:44,238 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:44,240 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:44,242 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:44,335 | INFO     | all job control threads have been joined
[2025-10-12 22:46:36] 2025-10-12 20:45:44,588 | INFO     | [job] validate thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:44,864 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:44,954 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,034 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,142 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,208 | INFO     | [data] control thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,208 | INFO     | [payload] control thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,341 | INFO     | [job] control thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,463 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,516 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,635 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:45:45,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:46:36] 2025-10-12 20:45:49,685 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:46:36] 2025-10-12 20:46:13,940 | INFO     | PID=2723425 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:46:36] 2025-10-12 20:46:13,940 | INFO     | .. there are 3 such processes running
[2025-10-12 22:46:36] 2025-10-12 20:46:13,941 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:46:36] 2025-10-12 20:46:13,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:46:36] 2025-10-12 20:46:13,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:46:36] 2025-10-12 20:46:30,076 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:46:36] 2025-10-12 20:46:31,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129750552840000)>', '<ExcThread(monitor, started 129749460436736)>']
[2025-10-12 22:46:36] 2025-10-12 20:46:32,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:46:36] 2025-10-12 20:46:32,028 | INFO     | [monitor] control thread has ended
[2025-10-12 22:46:36] 2025-10-12 20:46:36,093 | INFO     | all workflow threads have been joined
[2025-10-12 22:46:36] 2025-10-12 20:46:36,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:46:36] 2025-10-12 20:46:36,093 | INFO     | traces error code: 0
[2025-10-12 22:46:36] 2025-10-12 20:46:36,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:46:36] 2025-10-12 20:46:36,199 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:46:36] 2025-10-12 20:46:36,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:46:36] 2025-10-12 20:46:36,206 [wrapper] pilotpid: 2723425
[2025-10-12 22:46:36] 2025-10-12 20:46:36,209 [wrapper] Pilot exit status: 0
[2025-10-12 22:46:36] 2025-10-12 20:46:36,219 [wrapper] pandaids: 6840392405
[2025-10-12 22:46:36] 2025-10-12 20:46:36,258 [wrapper] cleanup supervisor_pilot 2805668 2723426
[2025-10-12 22:46:36] 2025-10-12 20:46:36,260 [wrapper] Test setup, not cleaning
[2025-10-12 22:46:36] 2025-10-12 20:46:36,264 [wrapper] apfmon messages muted
[2025-10-12 22:46:36] 2025-10-12 20:46:36,267 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:46:36] 2025-10-12 20:46:36,270 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:46:36]  *** Error codes and diagnostics ***
[2025-10-12 22:46:36]     "exeErrorCode": 0,
[2025-10-12 22:46:36]     "exeErrorDiag": "",
[2025-10-12 22:46:36]     "pilotErrorCode": 0,
[2025-10-12 22:46:36]     "pilotErrorDiag": "",
[2025-10-12 22:46:36]  *** Listing of results directory ***
[2025-10-12 22:46:36] total 406228
[2025-10-12 22:46:36] -rw-r--r-- 1 josemi7 josemi7    557409 oct 12 18:42 pilot3.tar.gz
[2025-10-12 22:46:36] -rwx------ 1 josemi7 josemi7     36292 oct 12 18:45 runpilot2-wrapper.sh
[2025-10-12 22:46:36] -rw-r--r-- 1 josemi7 josemi7      5112 oct 12 18:45 queuedata.json
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7       100 oct 12 21:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:46:36] -rwxr-xr-x 1 josemi7 josemi7      7986 oct 12 21:34 run_atlas
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7       105 oct 12 21:34 job.xml
[2025-10-12 22:46:36] -rw-r--r-- 2 josemi7 josemi7 219972596 oct 12 21:34 EVNT.46676267._004782.pool.root.1
[2025-10-12 22:46:36] drwxrwx--x 1 josemi7 josemi7        76 oct 12 21:34 shared
[2025-10-12 22:46:36] -rw-r--r-- 2 josemi7 josemi7    569676 oct 12 21:34 input.tar.gz
[2025-10-12 22:46:36] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 21:34 start_atlas.sh
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7      6165 oct 12 21:34 init_data.xml
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 21:34 boinc_setup_complete
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 21:34 boinc_lockfile
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7      2550 oct 12 21:34 pandaJob.out
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7    975536 oct 12 21:34 agis_schedconf.cvmfs.json
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7   1560580 oct 12 21:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:46:36] drwx------ 1 josemi7 josemi7       414 oct 12 21:34 pilot3
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7 190216280 oct 12 22:44 HITS.46676269._083866.pool.root.1
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7       529 oct 12 22:45 boinc_task_state.xml
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7      1030 oct 12 22:45 memory_monitor_summary.json
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7    311127 oct 12 22:45 log.46676269._083866.job.log.tgz.1
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7      7774 oct 12 22:45 heartbeat.json
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7        95 oct 12 22:46 pilot_heartbeat.json
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7      8192 oct 12 22:46 boinc_mmap_file
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7        27 oct 12 22:46 wrapper_checkpoint.txt
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7      4831 oct 12 22:46 pilotlog.txt
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7    638758 oct 12 22:46 log.46676269._083866.job.log.1
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7       357 oct 12 22:46 output.list
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7       620 oct 12 22:46 runtime_log
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7    972800 oct 12 22:46 result.tar.gz
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7       638 oct 12 22:46 vXMNDmINES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRSUMDmIhrLum.diag
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7      8729 oct 12 22:46 runtime_log.err
[2025-10-12 22:46:36] -rw-rw-r-- 1 josemi7 josemi7     22428 oct 12 22:46 stderr.txt
[2025-10-12 22:46:36] HITS file was successfully produced:
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7 190216280 oct 12 22:44 shared/HITS.pool.root.1
[2025-10-12 22:46:36]  *** Contents of shared directory: ***
[2025-10-12 22:46:36] total 402108
[2025-10-12 22:46:36] -rw-r--r-- 2 josemi7 josemi7 219972596 oct 12 21:34 ATLAS.root_0
[2025-10-12 22:46:36] -rw-r--r-- 2 josemi7 josemi7    569676 oct 12 21:34 input.tar.gz
[2025-10-12 22:46:36] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 21:34 start_atlas.sh
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7 190216280 oct 12 22:44 HITS.pool.root.1
[2025-10-12 22:46:36] -rw------- 1 josemi7 josemi7    972800 oct 12 22:46 result.tar.gz
22:46:37 (2719455): run_atlas exited; CPU time 30631.103386
22:46:37 (2719455): called boinc_finish(0)

</stderr_txt>
]]>

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