Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:56:05 (2674500): wrapper (7.7.26015): starting
16:56:05 (2674500): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:56:05] Arguments: --nthreads 8
[2025-10-12 16:56:05] Threads: 8
[2025-10-12 16:56:05] Checking for CVMFS
[2025-10-12 16:56:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:56:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:56:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:56:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:56:06] 2.13.2.0 5112 6187 137272 151636 0 395 39134744 40960001 19348 16776704 0 19489384 99.887 4206632 28618 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:56:06] CVMFS is ok
[2025-10-12 16:56:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:56:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:56:06] Further information can be found at the LHC@home message board.
[2025-10-12 16:56:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:56:06] Checking for apptainer binary...
[2025-10-12 16:56:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:56:06] Running /usr/bin/apptainer --version
[2025-10-12 16:56:06] apptainer version 1.4.3-1.el9
[2025-10-12 16:56:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:56:26] c-212-2.aglt2.org
[2025-10-12 16:56:26] apptainer works
[2025-10-12 16:56:26] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:56:26] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:56:26] Starting ATLAS job with PandaID=6840392451
[2025-10-12 16:56:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:39:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:39:01]  status_code=0
[2025-10-12 18:39:01]  storage_token=
[2025-10-12 18:39:01]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6840392451/log.46676269._083912.job.log.tgz.1
[2025-10-12 18:39:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/ee/log.46676269._083912.job.log.tgz.1
[2025-10-12 18:39:01]  workdir=None
[2025-10-12 18:39:01] ]
[2025-10-12 18:39:01] 2025-10-12 22:38:04,660 | INFO     | transferring file log.46676269._083912.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6840392451/log.46676269._083912.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 18:39:01] 2025-10-12 22:38:04,661 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6840392451/log.46676269._083912.job.log.tgz.1 /tmp/boinchome/slots/3/log.46676269._083912.job
[2025-10-12 18:39:01] 2025-10-12 22:38:04,686 | INFO     | adding to output.list: log.46676269._083912.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/ee/log.46676269._083912.job.log.tg
[2025-10-12 18:39:01] 2025-10-12 22:38:04,687 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 18:39:01] 2025-10-12 22:38:04,687 | INFO     | summary of transferred files:
[2025-10-12 18:39:01] 2025-10-12 22:38:04,687 | INFO     |  -- lfn=log.46676269._083912.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 18:39:01] 2025-10-12 22:38:04,688 | INFO     | stage-out finished correctly
[2025-10-12 18:39:01] 2025-10-12 22:38:04,773 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 18:39:01] 2025-10-12 22:38:05,050 | INFO     | job 6840392451 has state=finished
[2025-10-12 18:39:01] 2025-10-12 22:38:05,050 | INFO     | preparing for final server update for job 6840392451 in state='finished'
[2025-10-12 18:39:01] 2025-10-12 22:38:05,051 | INFO     | this job has now completed (state=finished)
[2025-10-12 18:39:01] 2025-10-12 22:38:05,051 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 18:39:01] 2025-10-12 22:38:05,051 | INFO     | log transfer has been attempted: DONE
[2025-10-12 18:39:01] 2025-10-12 22:38:05,052 | INFO     | job 6840392451 has finished - writing final server update
[2025-10-12 18:39:01] 2025-10-12 22:38:05,057 | INFO     | total number of processed events: 400 (read)
[2025-10-12 18:39:01] 2025-10-12 22:38:05,058 | INFO     | executing command: lscpu
[2025-10-12 18:39:01] 2025-10-12 22:38:05,130 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 18:39:01] 2025-10-12 22:38:05,208 | INFO     | time since job start (6080s) is within the limit (172800.0s)
[2025-10-12 18:39:01] 2025-10-12 22:38:05,724 | INFO     | monitor loop #412: job 0:6840392451 is in state 'finished'
[2025-10-12 18:39:01] 2025-10-12 22:38:05,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:39:01] 2025-10-12 22:38:07,215 | INFO     | time since job start (6082s) is within the limit (172800.0s)
[2025-10-12 18:39:01] 2025-10-12 22:38:08,229 | INFO     | monitor loop #413: job 0:6840392451 is in state 'finished'
[2025-10-12 18:39:01] 2025-10-12 22:38:08,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:39:01] 2025-10-12 22:38:09,222 | INFO     | time since job start (6084s) is within the limit (172800.0s)
[2025-10-12 18:39:01] 2025-10-12 22:38:10,733 | INFO     | monitor loop #414: job 0:6840392451 is in state 'finished'
[2025-10-12 18:39:01] 2025-10-12 22:38:10,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:39:01] 2025-10-12 22:38:11,228 | INFO     | time since job start (6086s) is within the limit (172800.0s)
[2025-10-12 18:39:01] 2025-10-12 22:38:12,016 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 18:39:01] 2025-10-12 22:38:12,022 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2857.395395833333
[2025-10-12 18:39:01] 2025-10-12 22:38:12,038 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840392451/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:39:01] 2025-10-12 22:38:12,040 | INFO     | extracted standard info from prmon json
[2025-10-12 18:39:01] 2025-10-12 22:38:12,040 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:39:01] 2025-10-12 22:38:12,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:39:01] 2025-10-12 22:38:12,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:39:01] 2025-10-12 22:38:12,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:39:01] 2025-10-12 22:38:12,043 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:39:01] 2025-10-12 22:38:12,043 | INFO     | sum of square deviations: 241490975.85869613
[2025-10-12 18:39:01] 2025-10-12 22:38:12,051 | INFO     | sum of deviations: -6907545625.739133
[2025-10-12 18:39:01] 2025-10-12 22:38:12,051 | INFO     | mean x: 1760305724.6847825
[2025-10-12 18:39:01] 2025-10-12 22:38:12,053 | INFO     | mean y: 2554570.0434782607
[2025-10-12 18:39:01] 2025-10-12 22:38:12,053 | INFO     | -- intersect: 50353885775.16794
[2025-10-12 18:39:01] 2025-10-12 22:38:12,053 | INFO     | intersect: 50353885775.16794
[2025-10-12 18:39:01] 2025-10-12 22:38:12,053 | INFO     | chi2: 0.14893206171870071
[2025-10-12 18:39:01] 2025-10-12 22:38:12,053 | INFO     | -- intersect: 50353885775.16794
[2025-10-12 18:39:01] 2025-10-12 22:38:12,053 | INFO     | current memory leak: -28.60 B/s (using 92 data points, chi2=0.15)
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | could have reported an average CPU frequency of 2912 MHz (7 samples)
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | ..............................
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | . Timing measurements:
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | . get job = 0 s
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | . initial setup = 3 s
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | . payload setup = 9 s
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | . stage-in = 0 s
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | . payload execution = 6043 s
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | . stage-out = 1 s
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | . log creation = 0 s
[2025-10-12 18:39:01] 2025-10-12 22:38:12,054 | INFO     | ..............................
[2025-10-12 18:39:01] 2025-10-12 22:38:12,367 | INFO     | 
[2025-10-12 18:39:01] 2025-10-12 22:38:12,381 | INFO     | job summary report
[2025-10-12 18:39:01] 2025-10-12 22:38:12,381 | INFO     | --------------------------------------------------
[2025-10-12 18:39:01] 2025-10-12 22:38:12,381 | INFO     | PanDA job id: 6840392451
[2025-10-12 18:39:01] 2025-10-12 22:38:12,381 | INFO     | task id: 46676269
[2025-10-12 18:39:01] 2025-10-12 22:38:12,381 | INFO     | errors: (none)
[2025-10-12 18:39:01] 2025-10-12 22:38:12,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:39:01] 2025-10-12 22:38:12,381 | INFO     | pilot state: finished 
[2025-10-12 18:39:01] 2025-10-12 22:38:12,382 | INFO     | transexitcode: 0
[2025-10-12 18:39:01] 2025-10-12 22:38:12,382 | INFO     | exeerrorcode: 0
[2025-10-12 18:39:01] 2025-10-12 22:38:12,382 | INFO     | exeerrordiag: 
[2025-10-12 18:39:01] 2025-10-12 22:38:12,382 | INFO     | exitcode: 0
[2025-10-12 18:39:01] 2025-10-12 22:38:12,382 | INFO     | exitmsg: OK
[2025-10-12 18:39:01] 2025-10-12 22:38:12,382 | INFO     | cpuconsumptiontime: 36169 s
[2025-10-12 18:39:01] 2025-10-12 22:38:12,382 | INFO     | nevents: 400
[2025-10-12 18:39:01] 2025-10-12 22:38:12,382 | INFO     | neventsw: 0
[2025-10-12 18:39:01] 2025-10-12 22:38:12,382 | INFO     | pid: 2686010
[2025-10-12 18:39:01] 2025-10-12 22:38:12,383 | INFO     | pgrp: 2686010
[2025-10-12 18:39:01] 2025-10-12 22:38:12,383 | INFO     | corecount: 8
[2025-10-12 18:39:01] 2025-10-12 22:38:12,383 | INFO     | event service: False
[2025-10-12 18:39:01] 2025-10-12 22:38:12,383 | INFO     | sizes: {0: 2348680, 1: 2348879, 9: 2349141, 12: 2349169, 6056: 2375818, 6057: 2375817, 6059: 2385055, 6066: 2385193}
[2025-10-12 18:39:01] 2025-10-12 22:38:12,383 | INFO     | --------------------------------------------------
[2025-10-12 18:39:01] 2025-10-12 22:38:12,383 | INFO     | 
[2025-10-12 18:39:01] 2025-10-12 22:38:12,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 18:39:01] 2025-10-12 22:38:12,404 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,405 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,405 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,405 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:39:01] 2025-10-12 22:38:12,406 | INFO     | job 6840392451 has completed (purged errors)
[2025-10-12 18:39:01] 2025-10-12 22:38:12,407 | INFO     | overall cleanup function is called
[2025-10-12 18:39:01] 2025-10-12 22:38:12,955 | INFO     | PID=2679222 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 18:39:01] 2025-10-12 22:38:12,955 | INFO     | .. there are 16 such processes running
[2025-10-12 18:39:01] 2025-10-12 22:38:13,423 | INFO     | --- collectZombieJob: --- 10, [2686010]
[2025-10-12 18:39:01] 2025-10-12 22:38:13,423 | INFO     | zombie collector waiting for pid 2686010
[2025-10-12 18:39:01] 2025-10-12 22:38:13,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:39:01] 2025-10-12 22:38:13,423 | INFO     | collected zombie processes
[2025-10-12 18:39:01] 2025-10-12 22:38:13,423 | INFO     | will attempt to kill all subprocesses of pid=2686010
[2025-10-12 18:39:01] 2025-10-12 22:38:13,876 | INFO     | process IDs to be killed: [2686010] (in reverse order)
[2025-10-12 18:39:01] 2025-10-12 22:38:14,023 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:39:01] 2025-10-12 22:38:14,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:39:01] 2025-10-12 22:38:14,041 | INFO     | did not find any defunct processes belonging to 2686010
[2025-10-12 18:39:01] 2025-10-12 22:38:14,059 | INFO     | did not find any defunct processes belonging to 2686010
[2025-10-12 18:39:01] 2025-10-12 22:38:14,060 | INFO     | ready for new job
[2025-10-12 18:39:01] 2025-10-12 22:38:14,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:39:01] 2025-10-12 22:38:14,062 | INFO     | ***************************************
[2025-10-12 18:39:01] 2025-10-12 22:38:14,063 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:39:01] 2025-10-12 22:38:14,063 | INFO     | ***************************************
[2025-10-12 18:39:01] 2025-10-12 22:38:14,063 | INFO     | 
[2025-10-12 18:39:01] 2025-10-12 22:38:14,156 | INFO     | architecture information:
[2025-10-12 18:39:01] 2025-10-12 22:38:14,158 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:39:01] 2025-10-12 22:38:14,193 | INFO     | cat /etc/os-release:
[2025-10-12 18:39:01] NAME="CentOS Linux"
[2025-10-12 18:39:01] VERSION="7 (Core)"
[2025-10-12 18:39:01] ID="centos"
[2025-10-12 18:39:01] ID_LIKE="rhel fedora"
[2025-10-12 18:39:01] VERSION_ID="7"
[2025-10-12 18:39:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:39:01] ANSI_COLOR="0;31"
[2025-10-12 18:39:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:39:01] HOME_URL="https://www.centos.org/"
[2025-10-12 18:39:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:39:01] 
[2025-10-12 18:39:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:39:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:39:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:39:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:39:01] 
[2025-10-12 18:39:01] 2025-10-12 22:38:14,194 | INFO     | ***************************************
[2025-10-12 18:39:01] 2025-10-12 22:38:14,697 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 18:39:01] 2025-10-12 22:38:14,722 | INFO     | sufficient remaining disk space (126982553600 B)
[2025-10-12 18:39:01] 2025-10-12 22:38:14,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:39:01] 2025-10-12 22:38:14,723 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:39:01] 2025-10-12 22:38:14,723 | INFO     | update_server=False
[2025-10-12 18:39:01] 2025-10-12 22:38:14,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:39:01] 2025-10-12 22:38:14,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:39:01] 2025-10-12 22:38:14,763 | INFO     | aborting loop
[2025-10-12 18:39:01] 2025-10-12 22:38:15,063 | INFO     | all payload control threads have been joined
[2025-10-12 18:39:01] 2025-10-12 22:38:15,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:39:01] 2025-10-12 22:38:15,390 | INFO     | all job control threads have been joined
[2025-10-12 18:39:01] 2025-10-12 22:38:15,495 | INFO     | all data control threads have been joined
[2025-10-12 18:39:01] 2025-10-12 22:38:15,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:39:01] 2025-10-12 22:38:15,729 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:15,780 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:15,785 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:15,840 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:15,869 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:16,031 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:16,069 | INFO     | [payload] control thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:16,404 | INFO     | [job] control thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:16,503 | INFO     | [data] control thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:16,746 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:16,770 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:16,792 | INFO     | [job] validate thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:17,190 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:39:01] 2025-10-12 22:38:17,345 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:18,196 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:19,647 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:25,312 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:39:01] 2025-10-12 22:38:26,318 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:39:01] 2025-10-12 22:38:46,079 | INFO     | PID=2679222 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:39:01] 2025-10-12 22:38:46,079 | INFO     | .. there are 16 such processes running
[2025-10-12 18:39:01] 2025-10-12 22:38:46,093 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:39:01] 2025-10-12 22:38:46,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:39:01] 2025-10-12 22:38:46,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:39:01] 2025-10-12 22:38:55,491 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:39:01] 2025-10-12 22:38:55,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877355448128)>', '<ExcThread(monitor, started 139876859102976)>']
[2025-10-12 18:39:01] 2025-10-12 22:38:56,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:39:01] 2025-10-12 22:38:56,149 | INFO     | [monitor] control thread has ended
[2025-10-12 18:39:01] 2025-10-12 22:39:00,895 | INFO     | all workflow threads have been joined
[2025-10-12 18:39:01] 2025-10-12 22:39:00,896 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:39:01] 2025-10-12 22:39:00,896 | INFO     | traces error code: 0
[2025-10-12 18:39:01] 2025-10-12 22:39:00,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:39:01] 2025-10-12 22:39:01,283 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:39:01] 2025-10-12 22:39:01,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:39:01] 2025-10-12 22:39:01,289 [wrapper] pilotpid: 2679222
[2025-10-12 18:39:01] 2025-10-12 22:39:01,292 [wrapper] Pilot exit status: 0
[2025-10-12 18:39:01] 2025-10-12 22:39:01,384 [wrapper] pandaids: 6840392451
[2025-10-12 18:39:01] 2025-10-12 22:39:01,578 [wrapper] cleanup supervisor_pilot 2853790 2679223
[2025-10-12 18:39:01] 2025-10-12 22:39:01,583 [wrapper] Test setup, not cleaning
[2025-10-12 18:39:01] 2025-10-12 22:39:01,586 [wrapper] apfmon messages muted
[2025-10-12 18:39:01] 2025-10-12 22:39:01,588 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:39:01] 2025-10-12 22:39:01,592 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:39:01]  *** Error codes and diagnostics ***
[2025-10-12 18:39:01]     "exeErrorCode": 0,
[2025-10-12 18:39:01]     "exeErrorDiag": "",
[2025-10-12 18:39:01]     "pilotErrorCode": 0,
[2025-10-12 18:39:01]     "pilotErrorDiag": "",
[2025-10-12 18:39:01]  *** Listing of results directory ***
[2025-10-12 18:39:01] total 409228
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:42 pilot3.tar.gz
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:43 queuedata.json
[2025-10-12 18:39:01] -rwx------. 1 boincer umatlas     36292 Oct 12 12:44 runpilot2-wrapper.sh
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:39:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:56 run_atlas
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:56 job.xml
[2025-10-12 18:39:01] -rw-r--r--. 2 boincer umatlas 220855057 Oct 12 16:56 EVNT.46676267._004784.pool.root.1
[2025-10-12 18:39:01] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 16:56 input.tar.gz
[2025-10-12 18:39:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:56 start_atlas.sh
[2025-10-12 18:39:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:56 shared
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:56 boinc_lockfile
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 16:56 pandaJob.out
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas    975536 Oct 12 16:56 agis_schedconf.cvmfs.json
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:56 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:39:01] drwx------. 5 boincer umatlas      4096 Oct 12 16:56 pilot3
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 18:28 init_data.xml
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas 191952144 Oct 12 18:37 HITS.46676269._083912.pool.root.1
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas       529 Oct 12 18:37 boinc_task_state.xml
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas      1035 Oct 12 18:37 memory_monitor_summary.json
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas    331521 Oct 12 18:38 log.46676269._083912.job.log.tgz.1
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas      7773 Oct 12 18:38 heartbeat.json
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas        95 Oct 12 18:38 pilot_heartbeat.json
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas        27 Oct 12 18:38 wrapper_checkpoint.txt
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas      4897 Oct 12 18:39 pilotlog.txt
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas    840240 Oct 12 18:39 log.46676269._083912.job.log.1
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:39 boinc_mmap_file
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas       357 Oct 12 18:39 output.list
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:39 runtime_log
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas   1187840 Oct 12 18:39 result.tar.gz
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 18:39 runtime_log.err
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas       653 Oct 12 18:39 IzYMDmFMES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyRUMDmNHmlUm.diag
[2025-10-12 18:39:01] -rw-r--r--. 1 boincer umatlas     22176 Oct 12 18:39 stderr.txt
[2025-10-12 18:39:01] HITS file was successfully produced:
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas 191952144 Oct 12 18:37 shared/HITS.pool.root.1
[2025-10-12 18:39:01]  *** Contents of shared directory: ***
[2025-10-12 18:39:01] total 404876
[2025-10-12 18:39:01] -rw-r--r--. 2 boincer umatlas 220855057 Oct 12 16:56 ATLAS.root_0
[2025-10-12 18:39:01] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 16:56 input.tar.gz
[2025-10-12 18:39:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:56 start_atlas.sh
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas 191952144 Oct 12 18:37 HITS.pool.root.1
[2025-10-12 18:39:01] -rw-------. 1 boincer umatlas   1187840 Oct 12 18:39 result.tar.gz
18:39:23 (2674500): run_atlas exited; CPU time 36294.908860
18:39:23 (2674500): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN