Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:15:31 (25086): wrapper (7.7.26015): starting
14:15:31 (25086): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:15:31] Arguments: --nthreads 8
[2025-10-12 14:15:31] Threads: 8
[2025-10-12 14:15:31] Checking for CVMFS
[2025-10-12 14:15:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:15:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:15:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:15:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:15:31] 2.11.2.0 2936 196080 79036 151631 0 57 12521534 20275201 1 130560 1 67920792 99.976 8522585 26897 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:15:31] CVMFS is ok
[2025-10-12 14:15:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:15:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:15:31] Further information can be found at the LHC@home message board.
[2025-10-12 14:15:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:15:31] Checking for apptainer binary...
[2025-10-12 14:15:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:15:31] Running /usr/bin/apptainer --version
[2025-10-12 14:15:31] apptainer version 1.3.2-1.el7
[2025-10-12 14:15:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:15:33] c-204-13.aglt2.org
[2025-10-12 14:15:33] apptainer works
[2025-10-12 14:15:33] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:15:33] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:15:33] Starting ATLAS job with PandaID=6839870994
[2025-10-12 14:15:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:26:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:26:10] 2025-10-12 20:25:10,271 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:26:10] 2025-10-12 20:25:10,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:26:10] 2025-10-12 20:25:10,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:26:10] 2025-10-12 20:25:10,271 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:26:10] 2025-10-12 20:25:10,275 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:26:10] 2025-10-12 20:25:10,275 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,275 | INFO     | sum of deviations: -9982523547.000004
[2025-10-12 16:26:10] 2025-10-12 20:25:10,276 | INFO     | mean x: 1760296827.0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,276 | INFO     | mean y: 2505682.5196850393
[2025-10-12 16:26:10] 2025-10-12 20:25:10,276 | INFO     | -- intersect: 27669602492.96203
[2025-10-12 16:26:10] 2025-10-12 20:25:10,276 | INFO     | intersect: 27669602492.96203
[2025-10-12 16:26:10] 2025-10-12 20:25:10,276 | INFO     | chi2: 2.3699226164548195
[2025-10-12 16:26:10] 2025-10-12 20:25:10,277 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 16:26:10] 2025-10-12 20:25:10,277 | INFO     | sum of deviations: -845792114.4999888
[2025-10-12 16:26:10] 2025-10-12 20:25:10,277 | INFO     | mean x: 1760296674.5
[2025-10-12 16:26:10] 2025-10-12 20:25:10,277 | INFO     | mean y: 2524414.8114754097
[2025-10-12 16:26:10] 2025-10-12 20:25:10,278 | INFO     | -- intersect: 2646885539.762821
[2025-10-12 16:26:10] 2025-10-12 20:25:10,278 | INFO     | intersect: 2646885539.762821
[2025-10-12 16:26:10] 2025-10-12 20:25:10,278 | INFO     | chi2: 1.5278997699135661
[2025-10-12 16:26:10] 2025-10-12 20:25:10,278 | INFO     | current chi2=1.5278997699135661 (change=35.52955023488658 %)
[2025-10-12 16:26:10] 2025-10-12 20:25:10,278 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,279 | INFO     | sum of deviations: -614225896.9999977
[2025-10-12 16:26:10] 2025-10-12 20:25:10,279 | INFO     | mean x: 1760296522.0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,279 | INFO     | mean y: 2524948.076923077
[2025-10-12 16:26:10] 2025-10-12 20:25:10,279 | INFO     | -- intersect: 2179781829.551088
[2025-10-12 16:26:10] 2025-10-12 20:25:10,279 | INFO     | intersect: 2179781829.551088
[2025-10-12 16:26:10] 2025-10-12 20:25:10,280 | INFO     | chi2: 1.5285434978418693
[2025-10-12 16:26:10] 2025-10-12 20:25:10,280 | INFO     | current chi2=1.5285434978418693 (change=-0.04213155476419473 %)
[2025-10-12 16:26:10] 2025-10-12 20:25:10,280 | INFO     | right removable region: 116
[2025-10-12 16:26:10] 2025-10-12 20:25:10,280 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 16:26:10] 2025-10-12 20:25:10,281 | INFO     | sum of deviations: -27920151369.5
[2025-10-12 16:26:10] 2025-10-12 20:25:10,281 | INFO     | mean x: 1760296979.5
[2025-10-12 16:26:10] 2025-10-12 20:25:10,281 | INFO     | mean y: 2542901.926229508
[2025-10-12 16:26:10] 2025-10-12 20:25:10,281 | INFO     | -- intersect: 87294649804.96095
[2025-10-12 16:26:10] 2025-10-12 20:25:10,281 | INFO     | intersect: 87294649804.96095
[2025-10-12 16:26:10] 2025-10-12 20:25:10,281 | INFO     | chi2: 0.9959624923077844
[2025-10-12 16:26:10] 2025-10-12 20:25:10,282 | INFO     | current chi2=0.9959624923077844 (change=57.97489397364163 %)
[2025-10-12 16:26:10] 2025-10-12 20:25:10,282 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,282 | INFO     | sum of deviations: -24353016885.0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,282 | INFO     | mean x: 1760297132.0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,283 | INFO     | mean y: 2534689.2393162395
[2025-10-12 16:26:10] 2025-10-12 20:25:10,283 | INFO     | -- intersect: 86327113692.84758
[2025-10-12 16:26:10] 2025-10-12 20:25:10,283 | INFO     | intersect: 86327113692.84758
[2025-10-12 16:26:10] 2025-10-12 20:25:10,283 | INFO     | chi2: 0.9944705212987138
[2025-10-12 16:26:10] 2025-10-12 20:25:10,283 | INFO     | current chi2=0.9944705212987138 (change=0.14980192734100944 %)
[2025-10-12 16:26:10] 2025-10-12 20:25:10,283 | INFO     | left removable region: 20
[2025-10-12 16:26:10] 2025-10-12 20:25:10,284 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,284 | INFO     | sum of deviations: -7516782401.0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,284 | INFO     | mean x: 1760297101.5
[2025-10-12 16:26:10] 2025-10-12 20:25:10,284 | INFO     | mean y: 2536392.125
[2025-10-12 16:26:10] 2025-10-12 20:25:10,284 | INFO     | -- intersect: 48238721774.98927
[2025-10-12 16:26:10] 2025-10-12 20:25:10,284 | INFO     | intersect: 48238721774.98927
[2025-10-12 16:26:10] 2025-10-12 20:25:10,285 | INFO     | chi2: 0.0811226033731198
[2025-10-12 16:26:10] 2025-10-12 20:25:10,285 | INFO     | -- intersect: 48238721774.98927
[2025-10-12 16:26:10] 2025-10-12 20:25:10,285 | INFO     | current memory leak: -27.40 B/s (using 96 data points, chi2=0.08)
[2025-10-12 16:26:10] 2025-10-12 20:25:10,285 | INFO     | could have reported an average CPU frequency of 1993 MHz (8 samples)
[2025-10-12 16:26:10] 2025-10-12 20:25:10,286 | INFO     | ..............................
[2025-10-12 16:26:10] 2025-10-12 20:25:10,286 | INFO     | . Timing measurements:
[2025-10-12 16:26:10] 2025-10-12 20:25:10,286 | INFO     | . get job = 0 s
[2025-10-12 16:26:10] 2025-10-12 20:25:10,286 | INFO     | . initial setup = 2 s
[2025-10-12 16:26:10] 2025-10-12 20:25:10,286 | INFO     | . payload setup = 8 s
[2025-10-12 16:26:10] 2025-10-12 20:25:10,286 | INFO     | . stage-in = 0 s
[2025-10-12 16:26:10] 2025-10-12 20:25:10,286 | INFO     | . payload execution = 7718 s
[2025-10-12 16:26:10] 2025-10-12 20:25:10,286 | INFO     | . stage-out = 0 s
[2025-10-12 16:26:10] 2025-10-12 20:25:10,286 | INFO     | . log creation = 0 s
[2025-10-12 16:26:10] 2025-10-12 20:25:10,287 | INFO     | ..............................
[2025-10-12 16:26:10] 2025-10-12 20:25:10,379 | INFO     | 
[2025-10-12 16:26:10] 2025-10-12 20:25:10,379 | INFO     | job summary report
[2025-10-12 16:26:10] 2025-10-12 20:25:10,380 | INFO     | --------------------------------------------------
[2025-10-12 16:26:10] 2025-10-12 20:25:10,380 | INFO     | PanDA job id: 6839870994
[2025-10-12 16:26:10] 2025-10-12 20:25:10,380 | INFO     | task id: 46676269
[2025-10-12 16:26:10] 2025-10-12 20:25:10,380 | INFO     | errors: (none)
[2025-10-12 16:26:10] 2025-10-12 20:25:10,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:26:10] 2025-10-12 20:25:10,381 | INFO     | pilot state: finished 
[2025-10-12 16:26:10] 2025-10-12 20:25:10,381 | INFO     | transexitcode: 0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,381 | INFO     | exeerrorcode: 0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,381 | INFO     | exeerrordiag: 
[2025-10-12 16:26:10] 2025-10-12 20:25:10,381 | INFO     | exitcode: 0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,381 | INFO     | exitmsg: OK
[2025-10-12 16:26:10] 2025-10-12 20:25:10,382 | INFO     | cpuconsumptiontime: 57458 s
[2025-10-12 16:26:10] 2025-10-12 20:25:10,382 | INFO     | nevents: 400
[2025-10-12 16:26:10] 2025-10-12 20:25:10,382 | INFO     | neventsw: 0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,382 | INFO     | pid: 2922
[2025-10-12 16:26:10] 2025-10-12 20:25:10,382 | INFO     | pgrp: 2922
[2025-10-12 16:26:10] 2025-10-12 20:25:10,382 | INFO     | corecount: 8
[2025-10-12 16:26:10] 2025-10-12 20:25:10,383 | INFO     | event service: False
[2025-10-12 16:26:10] 2025-10-12 20:25:10,383 | INFO     | sizes: {0: 2348630, 1: 2348885, 7: 2349147, 12: 2349175, 7730: 2376776, 7731: 2385774, 7733: 2385958, 7740: 2386152}
[2025-10-12 16:26:10] 2025-10-12 20:25:10,383 | INFO     | --------------------------------------------------
[2025-10-12 16:26:10] 2025-10-12 20:25:10,383 | INFO     | 
[2025-10-12 16:26:10] 2025-10-12 20:25:10,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:26:10] 2025-10-12 20:25:10,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:26:10] 2025-10-12 20:25:10,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:26:10] 2025-10-12 20:25:10,418 | INFO     | job 6839870994 has completed (purged errors)
[2025-10-12 16:26:10] 2025-10-12 20:25:10,418 | INFO     | overall cleanup function is called
[2025-10-12 16:26:10] 2025-10-12 20:25:11,422 | INFO     | --- collectZombieJob: --- 10, [2922]
[2025-10-12 16:26:10] 2025-10-12 20:25:11,422 | INFO     | zombie collector waiting for pid 2922
[2025-10-12 16:26:10] 2025-10-12 20:25:11,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:26:10] 2025-10-12 20:25:11,423 | INFO     | collected zombie processes
[2025-10-12 16:26:10] 2025-10-12 20:25:11,423 | INFO     | will attempt to kill all subprocesses of pid=2922
[2025-10-12 16:26:10] 2025-10-12 20:25:11,518 | INFO     | process IDs to be killed: [2922] (in reverse order)
[2025-10-12 16:26:10] 2025-10-12 20:25:11,579 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:26:10] 2025-10-12 20:25:11,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:26:10] 2025-10-12 20:25:11,584 | INFO     | did not find any defunct processes belonging to 2922
[2025-10-12 16:26:10] 2025-10-12 20:25:11,587 | INFO     | did not find any defunct processes belonging to 2922
[2025-10-12 16:26:10] 2025-10-12 20:25:11,588 | INFO     | ready for new job
[2025-10-12 16:26:10] 2025-10-12 20:25:11,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:26:10] 2025-10-12 20:25:11,590 | INFO     | ***************************************
[2025-10-12 16:26:10] 2025-10-12 20:25:11,590 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:26:10] 2025-10-12 20:25:11,590 | INFO     | ***************************************
[2025-10-12 16:26:10] 2025-10-12 20:25:11,590 | INFO     | 
[2025-10-12 16:26:10] 2025-10-12 20:25:11,591 | INFO     | architecture information:
[2025-10-12 16:26:10] 2025-10-12 20:25:11,592 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:26:10] 2025-10-12 20:25:11,611 | INFO     | cat /etc/os-release:
[2025-10-12 16:26:10] NAME="CentOS Linux"
[2025-10-12 16:26:10] VERSION="7 (Core)"
[2025-10-12 16:26:10] ID="centos"
[2025-10-12 16:26:10] ID_LIKE="rhel fedora"
[2025-10-12 16:26:10] VERSION_ID="7"
[2025-10-12 16:26:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:26:10] ANSI_COLOR="0;31"
[2025-10-12 16:26:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:26:10] HOME_URL="https://www.centos.org/"
[2025-10-12 16:26:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:26:10] 
[2025-10-12 16:26:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:26:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:26:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:26:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:26:10] 
[2025-10-12 16:26:10] 2025-10-12 20:25:11,611 | INFO     | ***************************************
[2025-10-12 16:26:10] 2025-10-12 20:25:12,114 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:26:10] 2025-10-12 20:25:12,135 | INFO     | sufficient remaining disk space (18576572416 B)
[2025-10-12 16:26:10] 2025-10-12 20:25:12,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:26:10] 2025-10-12 20:25:12,135 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:26:10] 2025-10-12 20:25:12,135 | INFO     | update_server=False
[2025-10-12 16:26:10] 2025-10-12 20:25:12,136 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:26:10] 2025-10-12 20:25:12,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:26:10] 2025-10-12 20:25:12,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:26:10] 2025-10-12 20:25:12,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:26:10] 2025-10-12 20:25:12,289 | INFO     | aborting loop
[2025-10-12 16:26:10] 2025-10-12 20:25:12,548 | INFO     | all data control threads have been joined
[2025-10-12 16:26:10] 2025-10-12 20:25:12,741 | INFO     | all job control threads have been joined
[2025-10-12 16:26:10] 2025-10-12 20:25:13,137 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:13,142 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:13,207 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:13,231 | INFO     | all payload control threads have been joined
[2025-10-12 16:26:10] 2025-10-12 20:25:13,294 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:13,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:13,433 | INFO     | [job] validate thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:13,525 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:13,551 | INFO     | [data] control thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:13,651 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:13,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:26:10] 2025-10-12 20:25:13,749 | INFO     | [job] control thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:14,003 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:14,098 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:14,132 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:14,142 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:14,236 | INFO     | [payload] control thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:17,721 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:26:10] 2025-10-12 20:25:42,354 | INFO     | PID=28842 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 16:26:10] 2025-10-12 20:25:42,354 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:26:10] 2025-10-12 20:25:42,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:26:10] 2025-10-12 20:25:42,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:26:10] 2025-10-12 20:26:04,111 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:26:10] 2025-10-12 20:26:05,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140231074436928)>', '<ExcThread(monitor, started 140230346667776)>']
[2025-10-12 16:26:10] 2025-10-12 20:26:06,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:26:10] 2025-10-12 20:26:06,457 | INFO     | [monitor] control thread has ended
[2025-10-12 16:26:10] 2025-10-12 20:26:10,488 | INFO     | all workflow threads have been joined
[2025-10-12 16:26:10] 2025-10-12 20:26:10,492 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:26:10] 2025-10-12 20:26:10,493 | INFO     | traces error code: 0
[2025-10-12 16:26:10] 2025-10-12 20:26:10,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:26:10] 2025-10-12 20:26:10,607 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:26:10] 2025-10-12 20:26:10,612 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:26:10] 2025-10-12 20:26:10,617 [wrapper] pilotpid: 28842
[2025-10-12 16:26:10] 2025-10-12 20:26:10,622 [wrapper] Pilot exit status: 0
[2025-10-12 16:26:10] 2025-10-12 20:26:10,637 [wrapper] pandaids: 6839870994
[2025-10-12 16:26:10] 2025-10-12 20:26:10,692 [wrapper] cleanup supervisor_pilot   887 28843
[2025-10-12 16:26:10] 2025-10-12 20:26:10,697 [wrapper] Test setup, not cleaning
[2025-10-12 16:26:10] 2025-10-12 20:26:10,702 [wrapper] apfmon messages muted
[2025-10-12 16:26:10] 2025-10-12 20:26:10,707 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:26:10] 2025-10-12 20:26:10,712 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:26:10]  *** Error codes and diagnostics ***
[2025-10-12 16:26:10]     "exeErrorCode": 0,
[2025-10-12 16:26:10]     "exeErrorDiag": "",
[2025-10-12 16:26:10]     "pilotErrorCode": 0,
[2025-10-12 16:26:10]     "pilotErrorDiag": "",
[2025-10-12 16:26:10]  *** Listing of results directory ***
[2025-10-12 16:26:10] total 414888
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 07:23 pilot3.tar.gz
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 07:36 queuedata.json
[2025-10-12 16:26:10] -rwx------ 1 boincer umatlas     36292 Oct 12 07:36 runpilot2-wrapper.sh
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas       100 Oct 12 14:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:26:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 14:15 run_atlas
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas       105 Oct 12 14:15 job.xml
[2025-10-12 16:26:10] -rw-r--r-- 2 boincer umatlas 223052880 Oct 12 14:15 EVNT.46676267._003701.pool.root.1
[2025-10-12 16:26:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:15 start_atlas.sh
[2025-10-12 16:26:10] drwxrwx--x 2 boincer umatlas      4096 Oct 12 14:15 shared
[2025-10-12 16:26:10] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 14:15 input.tar.gz
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas         0 Oct 12 14:15 boinc_lockfile
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 14:15 pandaJob.out
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas    975528 Oct 12 14:15 agis_schedconf.cvmfs.json
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas   1560580 Oct 12 14:15 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:26:10] drwx------ 5 boincer umatlas      4096 Oct 12 14:15 pilot3
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 16:22 init_data.xml
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas 194956815 Oct 12 16:24 HITS.46676269._077231.pool.root.1
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas        95 Oct 12 16:24 pilot_heartbeat.json
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas       529 Oct 12 16:24 boinc_task_state.xml
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas      1051 Oct 12 16:24 memory_monitor_summary.json
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas    377522 Oct 12 16:25 log.46676269._077231.job.log.tgz.1
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas      7853 Oct 12 16:25 heartbeat.json
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:25 boinc_mmap_file
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas        27 Oct 12 16:26 wrapper_checkpoint.txt
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas      4746 Oct 12 16:26 pilotlog.txt
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas   1087153 Oct 12 16:26 log.46676269._077231.job.log.1
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas       357 Oct 12 16:26 output.list
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:26 runtime_log
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas   1484800 Oct 12 16:26 result.tar.gz
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas       659 Oct 12 16:26 x5SLDmoY9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdejNDmYMF57m.diag
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 16:26 runtime_log.err
[2025-10-12 16:26:10] -rw-r--r-- 1 boincer umatlas     20846 Oct 12 16:26 stderr.txt
[2025-10-12 16:26:10] HITS file was successfully produced:
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas 194956815 Oct 12 16:24 shared/HITS.pool.root.1
[2025-10-12 16:26:10]  *** Contents of shared directory: ***
[2025-10-12 16:26:10] total 410248
[2025-10-12 16:26:10] -rw-r--r-- 2 boincer umatlas 223052880 Oct 12 14:15 ATLAS.root_0
[2025-10-12 16:26:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 14:15 start_atlas.sh
[2025-10-12 16:26:10] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 14:15 input.tar.gz
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas 194956815 Oct 12 16:24 HITS.pool.root.1
[2025-10-12 16:26:10] -rw------- 1 boincer umatlas   1484800 Oct 12 16:26 result.tar.gz
16:26:12 (25086): run_atlas exited; CPU time 57399.137601
16:26:12 (25086): called boinc_finish(0)

</stderr_txt>
]]>

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