Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:16:38 (4174544): wrapper (7.7.26015): starting
10:16:38 (4174544): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 10:16:38] Arguments: --nthreads 3
[2025-10-13 10:16:38] Threads: 3
[2025-10-13 10:16:38] Checking for CVMFS
[2025-10-13 10:16:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:16:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:16:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:16:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:16:39] 2.9.2.0 2497006 5577 86448 151653 1 57 29157853 36864001 0 130560 0 4399330 99.991 190616 956 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 10:16:39] CVMFS is ok
[2025-10-13 10:16:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:16:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:16:39] Further information can be found at the LHC@home message board.
[2025-10-13 10:16:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:16:39] Checking for apptainer binary...
[2025-10-13 10:16:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:16:39] Running /usr/bin/apptainer --version
[2025-10-13 10:16:39] apptainer version 1.4.1-1.1
[2025-10-13 10:16:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:16:39] thA367
[2025-10-13 10:16:39] apptainer works
[2025-10-13 10:16:39] Set ATHENA_PROC_NUMBER=3
[2025-10-13 10:16:39] Set ATHENA_CORE_NUMBER=3
[2025-10-13 10:16:39] Starting ATLAS job with PandaID=6840182364
[2025-10-13 10:16:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:38:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:38:57] 2025-10-13 09:38:12,594 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840182364/log.46676269._081211.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0812
[2025-10-13 11:38:57] 2025-10-13 09:38:12,607 | INFO     | adding to output.list: log.46676269._081211.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/12/log.46676269._081211.job.log.tg
[2025-10-13 11:38:57] 2025-10-13 09:38:12,608 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 11:38:57] 2025-10-13 09:38:12,608 | INFO     | summary of transferred files:
[2025-10-13 11:38:57] 2025-10-13 09:38:12,608 | INFO     |  -- lfn=log.46676269._081211.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 11:38:57] 2025-10-13 09:38:12,608 | INFO     | stage-out finished correctly
[2025-10-13 11:38:57] 2025-10-13 09:38:13,251 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 11:38:57] 2025-10-13 09:38:13,749 | INFO     | time since job start (4888s) is within the limit (172800.0s)
[2025-10-13 11:38:57] 2025-10-13 09:38:14,130 | INFO     | job 6840182364 has state=finished
[2025-10-13 11:38:57] 2025-10-13 09:38:14,130 | INFO     | preparing for final server update for job 6840182364 in state='finished'
[2025-10-13 11:38:57] 2025-10-13 09:38:14,130 | INFO     | this job has now completed (state=finished)
[2025-10-13 11:38:57] 2025-10-13 09:38:14,130 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 11:38:57] 2025-10-13 09:38:14,130 | INFO     | log transfer has been attempted: DONE
[2025-10-13 11:38:57] 2025-10-13 09:38:14,131 | INFO     | job 6840182364 has finished - writing final server update
[2025-10-13 11:38:57] 2025-10-13 09:38:14,131 | INFO     | total number of processed events: 400 (read)
[2025-10-13 11:38:57] 2025-10-13 09:38:14,132 | INFO     | executing command: lscpu
[2025-10-13 11:38:57] 2025-10-13 09:38:14,147 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 11:38:57] 2025-10-13 09:38:14,828 | INFO     | PID=4178269 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:38:57] 2025-10-13 09:38:15,829 | INFO     | time since job start (4890s) is within the limit (172800.0s)
[2025-10-13 11:38:57] 2025-10-13 09:38:16,696 | WARNING  | process 4184716 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 11:38:57] 2025-10-13 09:38:16,696 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840182364/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:38:57] 2025-10-13 09:38:16,697 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840182364/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:38:57] 2025-10-13 09:38:16,697 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 11:38:57] 2025-10-13 09:38:16,697 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 11:38:57] 2025-10-13 09:38:16,697 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1694734 B
[2025-10-13 11:38:57] 2025-10-13 09:38:16,697 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-10-13 11:38:57] 2025-10-13 09:38:16,697 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 11:38:57] 2025-10-13 09:38:17,835 | INFO     | time since job start (4892s) is within the limit (172800.0s)
[2025-10-13 11:38:57] 2025-10-13 09:38:18,972 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 11:38:57] 2025-10-13 09:38:18,975 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4001.751333333333
[2025-10-13 11:38:57] 2025-10-13 09:38:18,976 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840182364/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:38:57] 2025-10-13 09:38:18,977 | INFO     | extracted standard info from prmon json
[2025-10-13 11:38:57] 2025-10-13 09:38:18,977 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:38:57] 2025-10-13 09:38:18,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:38:57] 2025-10-13 09:38:18,978 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:38:57] 2025-10-13 09:38:18,978 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | sum of square deviations: 120605052.0
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | sum of deviations: -5032347317.0
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | mean x: 1760345926.0
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | mean y: 2458496.821917808
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | -- intersect: 73454374074.1062
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | intersect: 73454374074.1062
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | chi2: 0.03144723727803676
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | -- intersect: 73454374074.1062
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | current memory leak: -41.73 B/s (using 73 data points, chi2=0.03)
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | could have reported an average CPU frequency of 3975 MHz (6 samples)
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | ..............................
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | . Timing measurements:
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | . get job = 0 s
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | . initial setup = 1 s
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | . payload setup = 3 s
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | . stage-in = 0 s
[2025-10-13 11:38:57] 2025-10-13 09:38:18,979 | INFO     | . payload execution = 4866 s
[2025-10-13 11:38:57] 2025-10-13 09:38:18,980 | INFO     | . stage-out = 0 s
[2025-10-13 11:38:57] 2025-10-13 09:38:18,980 | INFO     | . log creation = 0 s
[2025-10-13 11:38:57] 2025-10-13 09:38:18,980 | INFO     | ..............................
[2025-10-13 11:38:57] 2025-10-13 09:38:18,997 | INFO     | sufficient remaining disk space (274535022592 B)
[2025-10-13 11:38:57] 2025-10-13 09:38:19,002 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 11:38:57] 2025-10-13 09:38:19,012 | INFO     | 
[2025-10-13 11:38:57] 2025-10-13 09:38:19,012 | INFO     | job summary report
[2025-10-13 11:38:57] 2025-10-13 09:38:19,012 | INFO     | --------------------------------------------------
[2025-10-13 11:38:57] 2025-10-13 09:38:19,012 | INFO     | PanDA job id: 6840182364
[2025-10-13 11:38:57] 2025-10-13 09:38:19,012 | INFO     | task id: 46676269
[2025-10-13 11:38:57] 2025-10-13 09:38:19,012 | INFO     | errors: (none)
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | pilot state: finished 
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | transexitcode: 0
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | exeerrorcode: 0
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | exeerrordiag: 
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | exitcode: 0
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | exitmsg: OK
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | cpuconsumptiontime: 13929 s
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | nevents: 400
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | neventsw: 0
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | pid: 4184716
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | pgrp: 4184716
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | corecount: 3
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | event service: False
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | sizes: {0: 2348854, 3: 2349116, 11: 2349144, 4874: 2384549, 4875: 2384549, 4881: 2384743}
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | --------------------------------------------------
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | 
[2025-10-13 11:38:57] 2025-10-13 09:38:19,013 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 11:38:57] 2025-10-13 09:38:19,016 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6840182364: 1994081 B (within 2537553920 B limit)
[2025-10-13 11:38:57] 2025-10-13 09:38:19,016 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6840182364/HITS.46676269._081211.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 11:38:57] 2025-10-13 09:38:19,016 | INFO     | total size of present files: 0 B (workdir size: 1994081 B)
[2025-10-13 11:38:57] 2025-10-13 09:38:19,016 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6840182364/HITS.46676269._081211.pool.root.1 since it does not exist
[2025-10-13 11:38:57] 2025-10-13 09:38:19,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:38:57] 2025-10-13 09:38:19,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,028 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:38:57] 2025-10-13 09:38:19,028 | INFO     | job 6840182364 has completed (purged errors)
[2025-10-13 11:38:57] 2025-10-13 09:38:19,028 | INFO     | overall cleanup function is called
[2025-10-13 11:38:57] 2025-10-13 09:38:19,071 | INFO     | number of running child processes to parent process 4184716: 1
[2025-10-13 11:38:57] 2025-10-13 09:38:19,071 | INFO     | maximum number of monitored processes: 6
[2025-10-13 11:38:57] 2025-10-13 09:38:19,071 | INFO     | aborting job monitoring since job object (job id=6840182364) has expired
[2025-10-13 11:38:57] 2025-10-13 09:38:20,032 | INFO     | --- collectZombieJob: --- 10, [4184716]
[2025-10-13 11:38:57] 2025-10-13 09:38:20,032 | INFO     | zombie collector waiting for pid 4184716
[2025-10-13 11:38:57] 2025-10-13 09:38:20,032 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:38:57] 2025-10-13 09:38:20,033 | INFO     | collected zombie processes
[2025-10-13 11:38:57] 2025-10-13 09:38:20,033 | INFO     | will attempt to kill all subprocesses of pid=4184716
[2025-10-13 11:38:57] 2025-10-13 09:38:20,085 | INFO     | process IDs to be killed: [4184716] (in reverse order)
[2025-10-13 11:38:57] 2025-10-13 09:38:20,114 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:38:57] 2025-10-13 09:38:20,114 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:38:57] 2025-10-13 09:38:20,116 | INFO     | did not find any defunct processes belonging to 4184716
[2025-10-13 11:38:57] 2025-10-13 09:38:20,117 | INFO     | did not find any defunct processes belonging to 4184716
[2025-10-13 11:38:57] 2025-10-13 09:38:20,117 | INFO     | ready for new job
[2025-10-13 11:38:57] 2025-10-13 09:38:20,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:38:57] 2025-10-13 09:38:20,118 | INFO     | ***************************************
[2025-10-13 11:38:57] 2025-10-13 09:38:20,118 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:38:57] 2025-10-13 09:38:20,118 | INFO     | ***************************************
[2025-10-13 11:38:57] 2025-10-13 09:38:20,118 | INFO     | 
[2025-10-13 11:38:57] 2025-10-13 09:38:20,119 | INFO     | architecture information:
[2025-10-13 11:38:57] 2025-10-13 09:38:20,119 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:38:57] 2025-10-13 09:38:20,128 | INFO     | cat /etc/os-release:
[2025-10-13 11:38:57] NAME="CentOS Linux"
[2025-10-13 11:38:57] VERSION="7 (Core)"
[2025-10-13 11:38:57] ID="centos"
[2025-10-13 11:38:57] ID_LIKE="rhel fedora"
[2025-10-13 11:38:57] VERSION_ID="7"
[2025-10-13 11:38:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:38:57] ANSI_COLOR="0;31"
[2025-10-13 11:38:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:38:57] HOME_URL="https://www.centos.org/"
[2025-10-13 11:38:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:38:57] 
[2025-10-13 11:38:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:38:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:38:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:38:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:38:57] 
[2025-10-13 11:38:57] 2025-10-13 09:38:20,128 | INFO     | ***************************************
[2025-10-13 11:38:57] 2025-10-13 09:38:20,631 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 11:38:57] 2025-10-13 09:38:20,644 | INFO     | sufficient remaining disk space (274537119744 B)
[2025-10-13 11:38:57] 2025-10-13 09:38:20,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:38:57] 2025-10-13 09:38:20,644 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:38:57] 2025-10-13 09:38:20,644 | INFO     | update_server=False
[2025-10-13 11:38:57] 2025-10-13 09:38:20,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:38:57] 2025-10-13 09:38:20,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:38:57] 2025-10-13 09:38:20,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:38:57] 2025-10-13 09:38:20,644 | INFO     | aborting loop
[2025-10-13 11:38:57] 2025-10-13 09:38:20,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:38:57] 2025-10-13 09:38:20,657 | INFO     | all payload control threads have been joined
[2025-10-13 11:38:57] 2025-10-13 09:38:21,307 | INFO     | all data control threads have been joined
[2025-10-13 11:38:57] 2025-10-13 09:38:21,650 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:21,650 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:21,650 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:21,663 | INFO     | [payload] control thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:21,846 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:22,076 | INFO     | [job] validate thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:22,140 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:22,152 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:22,181 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:22,257 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:22,313 | INFO     | [data] control thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:22,324 | INFO     | all job control threads have been joined
[2025-10-13 11:38:57] 2025-10-13 09:38:22,582 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:22,656 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:22,780 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:23,329 | INFO     | [job] control thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:23,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:38:57] 2025-10-13 09:38:27,799 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:38:57] 2025-10-13 09:38:50,566 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:38:57] 2025-10-13 09:38:50,971 | INFO     | PID=4178269 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:38:57] 2025-10-13 09:38:50,971 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:38:57] 2025-10-13 09:38:50,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:38:57] 2025-10-13 09:38:50,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:38:57] 2025-10-13 09:38:52,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392834819904)>', '<ExcThread(monitor, started 140392196462336)>']
[2025-10-13 11:38:57] 2025-10-13 09:38:52,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:38:57] 2025-10-13 09:38:52,983 | INFO     | [monitor] control thread has ended
[2025-10-13 11:38:57] 2025-10-13 09:38:57,651 | INFO     | all workflow threads have been joined
[2025-10-13 11:38:57] 2025-10-13 09:38:57,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:38:57] 2025-10-13 09:38:57,652 | INFO     | traces error code: 0
[2025-10-13 11:38:57] 2025-10-13 09:38:57,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:38:57] 2025-10-13 09:38:57,704 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:38:57] 2025-10-13 09:38:57,707 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:38:57] 2025-10-13 09:38:57,709 [wrapper] pilotpid: 4178269
[2025-10-13 11:38:57] 2025-10-13 09:38:57,711 [wrapper] Pilot exit status: 0
[2025-10-13 11:38:57] 2025-10-13 09:38:57,720 [wrapper] pandaids: 6840182364
[2025-10-13 11:38:57] 2025-10-13 09:38:57,740 [wrapper] cleanup supervisor_pilot    9291 4178270
[2025-10-13 11:38:57] 2025-10-13 09:38:57,743 [wrapper] Test setup, not cleaning
[2025-10-13 11:38:57] 2025-10-13 09:38:57,745 [wrapper] apfmon messages muted
[2025-10-13 11:38:57] 2025-10-13 09:38:57,747 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:38:57] 2025-10-13 09:38:57,750 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:38:57]  *** Error codes and diagnostics ***
[2025-10-13 11:38:57]     "exeErrorCode": 0,
[2025-10-13 11:38:57]     "exeErrorDiag": "",
[2025-10-13 11:38:57]     "pilotErrorCode": 0,
[2025-10-13 11:38:57]     "pilotErrorDiag": "",
[2025-10-13 11:38:57]  *** Listing of results directory ***
[2025-10-13 11:38:57] total 405660
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-13 11:38:57] -rwx------ 1 boinc boinc     36292 Oct 12 16:43 runpilot2-wrapper.sh
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:43 queuedata.json
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:38:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:16 run_atlas
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:16 job.xml
[2025-10-13 11:38:57] -rw-r--r-- 2 boinc boinc 221074351 Oct 13 10:16 EVNT.46676267._004534.pool.root.1
[2025-10-13 11:38:57] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:16 shared
[2025-10-13 11:38:57] -rw-r--r-- 2 boinc boinc    569678 Oct 13 10:16 input.tar.gz
[2025-10-13 11:38:57] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:16 start_atlas.sh
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:16 boinc_setup_complete
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc      6447 Oct 13 10:16 init_data.xml
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:16 boinc_lockfile
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc      2547 Oct 13 10:16 pandaJob.out
[2025-10-13 11:38:57] -rw------- 1 boinc boinc    972849 Oct 13 10:16 agis_schedconf.cvmfs.json
[2025-10-13 11:38:57] -rw------- 1 boinc boinc   1560580 Oct 13 10:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:38:57] drwx------ 5 boinc boinc      4096 Oct 13 10:16 pilot3
[2025-10-13 11:38:57] -rw------- 1 boinc boinc 188513386 Oct 13 11:37 HITS.46676269._081211.pool.root.1
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc       529 Oct 13 11:38 boinc_task_state.xml
[2025-10-13 11:38:57] -rw------- 1 boinc boinc      1028 Oct 13 11:38 memory_monitor_summary.json
[2025-10-13 11:38:57] -rw------- 1 boinc boinc    235797 Oct 13 11:38 log.46676269._081211.job.log.tgz.1
[2025-10-13 11:38:57] -rw------- 1 boinc boinc        95 Oct 13 11:38 pilot_heartbeat.json
[2025-10-13 11:38:57] -rw------- 1 boinc boinc      7780 Oct 13 11:38 heartbeat.json
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:38 boinc_mmap_file
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:38 wrapper_checkpoint.txt
[2025-10-13 11:38:57] -rw------- 1 boinc boinc      4752 Oct 13 11:38 pilotlog.txt
[2025-10-13 11:38:57] -rw------- 1 boinc boinc    719440 Oct 13 11:38 log.46676269._081211.job.log.1
[2025-10-13 11:38:57] -rw------- 1 boinc boinc       357 Oct 13 11:38 output.list
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:38 runtime_log
[2025-10-13 11:38:57] -rw------- 1 boinc boinc    972800 Oct 13 11:38 result.tar.gz
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc      8777 Oct 13 11:38 runtime_log.err
[2025-10-13 11:38:57] -rw------- 1 boinc boinc       662 Oct 13 11:38 cPnMDmKTCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmI9TMDmTVOPKm.diag
[2025-10-13 11:38:57] -rw-r--r-- 1 boinc boinc     22735 Oct 13 11:38 stderr.txt
[2025-10-13 11:38:57] HITS file was successfully produced:
[2025-10-13 11:38:57] -rw------- 1 boinc boinc 188513386 Oct 13 11:37 shared/HITS.pool.root.1
[2025-10-13 11:38:57]  *** Contents of shared directory: ***
[2025-10-13 11:38:57] total 401524
[2025-10-13 11:38:57] -rw-r--r-- 2 boinc boinc 221074351 Oct 13 10:16 ATLAS.root_0
[2025-10-13 11:38:57] -rw-r--r-- 2 boinc boinc    569678 Oct 13 10:16 input.tar.gz
[2025-10-13 11:38:57] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:16 start_atlas.sh
[2025-10-13 11:38:57] -rw------- 1 boinc boinc 188513386 Oct 13 11:37 HITS.pool.root.1
[2025-10-13 11:38:57] -rw------- 1 boinc boinc    972800 Oct 13 11:38 result.tar.gz
11:38:59 (4174544): run_atlas exited; CPU time 13949.752768
11:38:59 (4174544): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN