Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
23:59:35 (34761): wrapper (7.7.26015): starting
23:59:35 (34761): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 23:59:35] Arguments: --nthreads 12
[2025-10-12 23:59:35] Threads: 12
[2025-10-12 23:59:35] Checking for CVMFS
[2025-10-12 23:59:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:59:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:59:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:59:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:59:36] 2.13.2.0 17250 1 42100 151641 2 186 2429899 4096000 854 130560 0 45759 100.000 0 0 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 23:59:36] CVMFS is ok
[2025-10-12 23:59:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:59:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:59:36] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 23:59:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 23:59:36] Further information can be found at the LHC@home message board.
[2025-10-12 23:59:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:59:36] Checking for apptainer binary...
[2025-10-12 23:59:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:59:36] Running /usr/bin/apptainer --version
[2025-10-12 23:59:36] apptainer version 1.4.3
[2025-10-12 23:59:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:59:36] test-run
[2025-10-12 23:59:36] apptainer works
[2025-10-12 23:59:36] Set ATHENA_PROC_NUMBER=12
[2025-10-12 23:59:36] Set ATHENA_CORE_NUMBER=12
[2025-10-12 23:59:36] Starting ATLAS job with PandaID=6840182376
[2025-10-12 23:59:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:27:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:27:50] 2025-10-13 00:27:09,108 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:27:50] 2025-10-13 00:27:09,108 | INFO     | summary of transferred files:
[2025-10-13 00:27:50] 2025-10-13 00:27:09,108 | INFO     |  -- lfn=log.46676269._081221.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:27:50] 2025-10-13 00:27:09,108 | INFO     | stage-out finished correctly
[2025-10-13 00:27:50] 2025-10-13 00:27:10,782 | WARNING  | process 45261 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 00:27:50] 2025-10-13 00:27:10,782 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-6840182376/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:27:50] 2025-10-13 00:27:10,783 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-6840182376/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:27:50] 2025-10-13 00:27:10,783 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 00:27:50] 2025-10-13 00:27:10,783 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 00:27:50] 2025-10-13 00:27:10,783 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4119207 B
[2025-10-13 00:27:50] 2025-10-13 00:27:10,783 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15667 B
[2025-10-13 00:27:50] 2025-10-13 00:27:10,783 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2025-10-13 00:27:50] 2025-10-13 00:27:10,793 | INFO     | sufficient remaining disk space (25608323072 B)
[2025-10-13 00:27:50] 2025-10-13 00:27:10,793 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 00:27:50] 2025-10-13 00:27:10,793 | INFO     | size of work directory /var/lib/boinc-client/slots/9/PanDA_Pilot-6840182376: 4397056 B (within 2537553920 B limit)
[2025-10-13 00:27:50] 2025-10-13 00:27:10,793 | INFO     | pfn file=/var/lib/boinc-client/slots/9/PanDA_Pilot-6840182376/HITS.46676269._081221.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 00:27:50] 2025-10-13 00:27:10,793 | INFO     | total size of present files: 0 B (workdir size: 4397056 B)
[2025-10-13 00:27:50] 2025-10-13 00:27:10,793 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/9/PanDA_Pilot-6840182376/HITS.46676269._081221.pool.root.1 since it does not exist
[2025-10-13 00:27:50] 2025-10-13 00:27:10,816 | INFO     | number of running child processes to parent process 45261: 1
[2025-10-13 00:27:50] 2025-10-13 00:27:10,816 | INFO     | maximum number of monitored processes: 6
[2025-10-13 00:27:50] 2025-10-13 00:27:11,045 | INFO     | time since job start (1650s) is within the limit (172800.0s)
[2025-10-13 00:27:50] 2025-10-13 00:27:11,453 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:27:50] 2025-10-13 00:27:13,050 | INFO     | time since job start (1652s) is within the limit (172800.0s)
[2025-10-13 00:27:50] 2025-10-13 00:27:13,320 | INFO     | monitor loop #130: job 0:6840182376 is in state 'finished'
[2025-10-13 00:27:50] 2025-10-13 00:27:13,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:27:50] 2025-10-13 00:27:13,778 | INFO     | job 6840182376 has state=finished
[2025-10-13 00:27:50] 2025-10-13 00:27:13,778 | INFO     | preparing for final server update for job 6840182376 in state='finished'
[2025-10-13 00:27:50] 2025-10-13 00:27:13,778 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:27:50] 2025-10-13 00:27:13,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:27:50] 2025-10-13 00:27:13,778 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:27:50] 2025-10-13 00:27:13,778 | INFO     | job 6840182376 has finished - writing final server update
[2025-10-13 00:27:50] 2025-10-13 00:27:13,778 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:27:50] 2025-10-13 00:27:13,779 | INFO     | executing command: lscpu
[2025-10-13 00:27:50] 2025-10-13 00:27:13,787 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:27:50] 2025-10-13 00:27:14,876 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 00:27:50] 2025-10-13 00:27:14,876 | INFO     | found 32 cores (32 cores per socket, 1 socket) , CPU MHz: 4299.979999999998
[2025-10-13 00:27:50] 2025-10-13 00:27:14,877 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-6840182376/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:27:50] 2025-10-13 00:27:14,877 | INFO     | extracted standard info from prmon json
[2025-10-13 00:27:50] 2025-10-13 00:27:14,877 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | sum of square deviations: 2474465.0
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | sum of deviations: -196955336.0
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | mean x: 1760314479.5
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | mean y: 2788756.4
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | -- intersect: 140115229132.63794
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | intersect: 140115229132.63794
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | chi2: 0.045734602162919934
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | -- intersect: 140115229132.63794
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | current memory leak: -79.60 B/s (using 20 data points, chi2=0.05)
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | ..............................
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | . Timing measurements:
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | . get job = 0 s
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | . initial setup = 2 s
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | . payload setup = 1 s
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | . stage-in = 0 s
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | . payload execution = 1631 s
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | . stage-out = 0 s
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | . log creation = 0 s
[2025-10-13 00:27:50] 2025-10-13 00:27:14,878 | INFO     | ..............................
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | 
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | job summary report
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | --------------------------------------------------
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | PanDA job id: 6840182376
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | task id: 46676269
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | errors: (none)
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | pilot state: finished 
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | transexitcode: 0
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | exeerrorcode: 0
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | exeerrordiag: 
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | exitcode: 0
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | exitmsg: OK
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | cpuconsumptiontime: 15515 s
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | nevents: 400
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | neventsw: 0
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | pid: 45261
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | pgrp: 45261
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | corecount: 12
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | event service: False
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | sizes: {0: 2348813, 1: 2349075, 11: 2349103, 1636: 2373927, 1637: 2382939, 1639: 2383023, 1642: 2383345}
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | --------------------------------------------------
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | 
[2025-10-13 00:27:50] 2025-10-13 00:27:14,898 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:27:50] 2025-10-13 00:27:14,905 | INFO     | job 6840182376 has completed (purged errors)
[2025-10-13 00:27:50] 2025-10-13 00:27:14,905 | INFO     | overall cleanup function is called
[2025-10-13 00:27:50] 2025-10-13 00:27:15,910 | INFO     | --- collectZombieJob: --- 10, [45261]
[2025-10-13 00:27:50] 2025-10-13 00:27:15,911 | INFO     | zombie collector waiting for pid 45261
[2025-10-13 00:27:50] 2025-10-13 00:27:15,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:27:50] 2025-10-13 00:27:15,911 | INFO     | collected zombie processes
[2025-10-13 00:27:50] 2025-10-13 00:27:15,911 | INFO     | will attempt to kill all subprocesses of pid=45261
[2025-10-13 00:27:50] 2025-10-13 00:27:15,928 | INFO     | process IDs to be killed: [45261] (in reverse order)
[2025-10-13 00:27:50] 2025-10-13 00:27:15,945 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:27:50] 2025-10-13 00:27:15,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:27:50] 2025-10-13 00:27:15,946 | INFO     | did not find any defunct processes belonging to 45261
[2025-10-13 00:27:50] 2025-10-13 00:27:15,947 | INFO     | did not find any defunct processes belonging to 45261
[2025-10-13 00:27:50] 2025-10-13 00:27:15,947 | INFO     | ready for new job
[2025-10-13 00:27:50] 2025-10-13 00:27:15,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:27:50] 2025-10-13 00:27:15,947 | INFO     | ***************************************
[2025-10-13 00:27:50] 2025-10-13 00:27:15,947 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:27:50] 2025-10-13 00:27:15,948 | INFO     | ***************************************
[2025-10-13 00:27:50] 2025-10-13 00:27:15,948 | INFO     | 
[2025-10-13 00:27:50] 2025-10-13 00:27:15,948 | INFO     | pilot is running in a VM
[2025-10-13 00:27:50] 2025-10-13 00:27:15,948 | INFO     | architecture information:
[2025-10-13 00:27:50] 2025-10-13 00:27:15,948 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:27:50] 2025-10-13 00:27:15,952 | INFO     | cat /etc/os-release:
[2025-10-13 00:27:50] NAME="CentOS Linux"
[2025-10-13 00:27:50] VERSION="7 (Core)"
[2025-10-13 00:27:50] ID="centos"
[2025-10-13 00:27:50] ID_LIKE="rhel fedora"
[2025-10-13 00:27:50] VERSION_ID="7"
[2025-10-13 00:27:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:27:50] ANSI_COLOR="0;31"
[2025-10-13 00:27:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:27:50] HOME_URL="https://www.centos.org/"
[2025-10-13 00:27:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:27:50] 
[2025-10-13 00:27:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:27:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:27:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:27:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:27:50] 
[2025-10-13 00:27:50] 2025-10-13 00:27:15,952 | INFO     | ***************************************
[2025-10-13 00:27:50] 2025-10-13 00:27:16,455 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2025-10-13 00:27:50] 2025-10-13 00:27:16,462 | INFO     | sufficient remaining disk space (25613565952 B)
[2025-10-13 00:27:50] 2025-10-13 00:27:16,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:27:50] 2025-10-13 00:27:16,462 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:27:50] 2025-10-13 00:27:16,462 | INFO     | update_server=False
[2025-10-13 00:27:50] 2025-10-13 00:27:16,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:27:50] 2025-10-13 00:27:16,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:27:50] 2025-10-13 00:27:16,537 | INFO     | all job control threads have been joined
[2025-10-13 00:27:50] 2025-10-13 00:27:16,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:27:50] 2025-10-13 00:27:16,829 | INFO     | aborting loop
[2025-10-13 00:27:50] 2025-10-13 00:27:17,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:27:50] 2025-10-13 00:27:17,262 | INFO     | all payload control threads have been joined
[2025-10-13 00:27:50] 2025-10-13 00:27:17,467 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:17,467 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:17,475 | INFO     | all data control threads have been joined
[2025-10-13 00:27:50] 2025-10-13 00:27:17,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:27:50] 2025-10-13 00:27:17,543 | INFO     | [job] control thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:17,669 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:17,830 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:17,851 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:17,926 | INFO     | [job] validate thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:18,105 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:18,105 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:18,262 | INFO     | [payload] control thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:18,479 | INFO     | [data] control thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:18,654 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:18,874 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:19,139 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:21,498 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:27,206 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:27:50] 2025-10-13 00:27:28,211 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:27:50] 2025-10-13 00:27:43,473 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:27:50] 2025-10-13 00:27:45,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136823187740480)>', '<ExcThread(monitor, started 136822558553856)>']
[2025-10-13 00:27:50] 2025-10-13 00:27:46,146 | INFO     | PID=38615 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 00:27:50] 2025-10-13 00:27:46,146 | INFO     | .. there are 2 such processes running
[2025-10-13 00:27:50] 2025-10-13 00:27:46,147 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:27:50] 2025-10-13 00:27:46,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:27:50] 2025-10-13 00:27:46,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:27:50] 2025-10-13 00:27:46,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:27:50] 2025-10-13 00:27:46,147 | INFO     | [monitor] control thread has ended
[2025-10-13 00:27:50] 2025-10-13 00:27:50,365 | INFO     | all workflow threads have been joined
[2025-10-13 00:27:50] 2025-10-13 00:27:50,365 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:27:50] 2025-10-13 00:27:50,365 | INFO     | traces error code: 0
[2025-10-13 00:27:50] 2025-10-13 00:27:50,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:27:50] 2025-10-13 00:27:50,409 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:27:50] 2025-10-13 00:27:50,410 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:27:50] 2025-10-13 00:27:50,412 [wrapper] pilotpid: 38615
[2025-10-13 00:27:50] 2025-10-13 00:27:50,412 [wrapper] Pilot exit status: 0
[2025-10-13 00:27:50] 2025-10-13 00:27:50,415 [wrapper] pandaids: 6840182376
[2025-10-13 00:27:50] 2025-10-13 00:27:50,428 [wrapper] cleanup supervisor_pilot   52294 38616
[2025-10-13 00:27:50] 2025-10-13 00:27:50,429 [wrapper] Test setup, not cleaning
[2025-10-13 00:27:50] 2025-10-13 00:27:50,430 [wrapper] apfmon messages muted
[2025-10-13 00:27:50] 2025-10-13 00:27:50,431 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:27:50] 2025-10-13 00:27:50,432 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:27:50]  *** Error codes and diagnostics ***
[2025-10-13 00:27:50]     "exeErrorCode": 0,
[2025-10-13 00:27:50]     "exeErrorDiag": "",
[2025-10-13 00:27:50]     "pilotErrorCode": 0,
[2025-10-13 00:27:50]     "pilotErrorDiag": "",
[2025-10-13 00:27:50]  *** Listing of results directory ***
[2025-10-13 00:27:50] total 414544
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:30 pilot3.tar.gz
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:43 queuedata.json
[2025-10-13 00:27:50] -rwx------ 1 boinc boinc     36292 Oct 12 14:44 runpilot2-wrapper.sh
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:27:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:59 run_atlas
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:59 job.xml
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc      6938 Oct 12 23:59 init_data.xml
[2025-10-13 00:27:50] -rw-r--r-- 2 boinc boinc 221074351 Oct 12 23:59 EVNT.46676267._004534.pool.root.1
[2025-10-13 00:27:50] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:59 start_atlas.sh
[2025-10-13 00:27:50] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:59 shared
[2025-10-13 00:27:50] -rw-r--r-- 2 boinc boinc    569679 Oct 12 23:59 input.tar.gz
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:59 boinc_lockfile
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc      2549 Oct 12 23:59 pandaJob.out
[2025-10-13 00:27:50] -rw------- 1 boinc boinc    975603 Oct 12 23:59 agis_schedconf.cvmfs.json
[2025-10-13 00:27:50] -rw------- 1 boinc boinc   1560580 Oct 12 23:59 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:27:50] drwx------ 5 boinc boinc      4096 Oct 12 23:59 pilot3
[2025-10-13 00:27:50] -rw------- 1 boinc boinc 198259141 Oct 13 00:26 HITS.46676269._081221.pool.root.1
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc       529 Oct 13 00:27 boinc_task_state.xml
[2025-10-13 00:27:50] -rw------- 1 boinc boinc      1018 Oct 13 00:27 memory_monitor_summary.json
[2025-10-13 00:27:50] -rw------- 1 boinc boinc    338489 Oct 13 00:27 log.46676269._081221.job.log.tgz.1
[2025-10-13 00:27:50] -rw------- 1 boinc boinc      7736 Oct 13 00:27 heartbeat.json
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:27 wrapper_checkpoint.txt
[2025-10-13 00:27:50] -rw------- 1 boinc boinc        95 Oct 13 00:27 pilot_heartbeat.json
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:27 boinc_mmap_file
[2025-10-13 00:27:50] -rw------- 1 boinc boinc      4962 Oct 13 00:27 pilotlog.txt
[2025-10-13 00:27:50] -rw------- 1 boinc boinc    284771 Oct 13 00:27 log.46676269._081221.job.log.1
[2025-10-13 00:27:50] -rw------- 1 boinc boinc       357 Oct 13 00:27 output.list
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:27 runtime_log
[2025-10-13 00:27:50] -rw------- 1 boinc boinc    645120 Oct 13 00:27 result.tar.gz
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc      8762 Oct 13 00:27 runtime_log.err
[2025-10-13 00:27:50] -rw------- 1 boinc boinc       642 Oct 13 00:27 rAPKDmTUCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4IkNDmnAdMim.diag
[2025-10-13 00:27:50] -rw-r--r-- 1 boinc boinc     22560 Oct 13 00:27 stderr.txt
[2025-10-13 00:27:50] HITS file was successfully produced:
[2025-10-13 00:27:50] -rw------- 1 boinc boinc 198259141 Oct 13 00:26 shared/HITS.pool.root.1
[2025-10-13 00:27:50]  *** Contents of shared directory: ***
[2025-10-13 00:27:50] total 410728
[2025-10-13 00:27:50] -rw-r--r-- 2 boinc boinc 221074351 Oct 12 23:59 ATLAS.root_0
[2025-10-13 00:27:50] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:59 start_atlas.sh
[2025-10-13 00:27:50] -rw-r--r-- 2 boinc boinc    569679 Oct 12 23:59 input.tar.gz
[2025-10-13 00:27:50] -rw------- 1 boinc boinc 198259141 Oct 13 00:26 HITS.pool.root.1
[2025-10-13 00:27:50] -rw------- 1 boinc boinc    645120 Oct 13 00:27 result.tar.gz
00:27:51 (34761): run_atlas exited; CPU time 15520.012406
00:27:51 (34761): called boinc_finish(0)

</stderr_txt>
]]>

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