Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:49:52 (3302183): wrapper (7.7.26015): starting
14:49:52 (3302183): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 14:49:52] Arguments: --nthreads 10
[2025-10-12 14:49:52] Threads: 10
[2025-10-12 14:49:52] Checking for CVMFS
[2025-10-12 14:49:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:49:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:49:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:49:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:49:52] 2.13.2.0 7513 77963 111396 151633 0 137 40706943 40960001 30312 16776704 0 467536840 99.757 291176403 46114 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:49:52] CVMFS is ok
[2025-10-12 14:49:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:49:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:49:52] Further information can be found at the LHC@home message board.
[2025-10-12 14:49:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:49:52] Checking for apptainer binary...
[2025-10-12 14:49:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:49:52] Running /usr/bin/apptainer --version
[2025-10-12 14:49:53] apptainer version 1.4.3-1.el9
[2025-10-12 14:49:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:49:53] c-208-40.aglt2.org
[2025-10-12 14:49:53] apptainer works
[2025-10-12 14:49:53] Set ATHENA_PROC_NUMBER=10
[2025-10-12 14:49:53] Set ATHENA_CORE_NUMBER=10
[2025-10-12 14:49:53] Starting ATLAS job with PandaID=6840182248
[2025-10-12 14:49:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:38:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:38:29] 2025-10-12 19:37:37,869 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:38:29] 2025-10-12 19:37:38,336 | INFO     | time since job start (2845s) is within the limit (172800.0s)
[2025-10-12 15:38:29] 2025-10-12 19:37:38,630 | INFO     | monitor loop #202: job 0:6840182248 is in state 'finished'
[2025-10-12 15:38:29] 2025-10-12 19:37:38,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:38:29] 2025-10-12 19:37:40,343 | INFO     | time since job start (2847s) is within the limit (172800.0s)
[2025-10-12 15:38:29] 2025-10-12 19:37:40,468 | INFO     | job 6840182248 has state=finished
[2025-10-12 15:38:29] 2025-10-12 19:37:40,468 | INFO     | preparing for final server update for job 6840182248 in state='finished'
[2025-10-12 15:38:29] 2025-10-12 19:37:40,469 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:38:29] 2025-10-12 19:37:40,469 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:38:29] 2025-10-12 19:37:40,469 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:38:29] 2025-10-12 19:37:40,469 | INFO     | job 6840182248 has finished - writing final server update
[2025-10-12 15:38:29] 2025-10-12 19:37:40,469 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:38:29] 2025-10-12 19:37:40,505 | INFO     | executing command: lscpu
[2025-10-12 15:38:29] 2025-10-12 19:37:40,591 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:38:29] 2025-10-12 19:37:41,134 | INFO     | monitor loop #203: job 0:6840182248 is in state 'finished'
[2025-10-12 15:38:29] 2025-10-12 19:37:41,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:38:29] 2025-10-12 19:37:42,349 | INFO     | time since job start (2849s) is within the limit (172800.0s)
[2025-10-12 15:38:29] 2025-10-12 19:37:43,643 | INFO     | monitor loop #204: job 0:6840182248 is in state 'finished'
[2025-10-12 15:38:29] 2025-10-12 19:37:43,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:38:29] 2025-10-12 19:37:44,356 | INFO     | time since job start (2851s) is within the limit (172800.0s)
[2025-10-12 15:38:29] 2025-10-12 19:37:46,147 | INFO     | monitor loop #205: job 0:6840182248 is in state 'finished'
[2025-10-12 15:38:29] 2025-10-12 19:37:46,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:38:29] 2025-10-12 19:37:46,363 | INFO     | time since job start (2853s) is within the limit (172800.0s)
[2025-10-12 15:38:29] 2025-10-12 19:37:48,370 | INFO     | time since job start (2855s) is within the limit (172800.0s)
[2025-10-12 15:38:29] 2025-10-12 19:37:48,654 | INFO     | monitor loop #206: job 0:6840182248 is in state 'finished'
[2025-10-12 15:38:29] 2025-10-12 19:37:48,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:38:29] 2025-10-12 19:37:50,076 | INFO     | PID=3311373 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:38:29] 2025-10-12 19:37:50,076 | INFO     | .. there are 31 such processes running
[2025-10-12 15:38:29] 2025-10-12 19:37:51,078 | INFO     | time since job start (2858s) is within the limit (172800.0s)
[2025-10-12 15:38:29] 2025-10-12 19:37:51,159 | INFO     | monitor loop #207: job 0:6840182248 is in state 'finished'
[2025-10-12 15:38:29] 2025-10-12 19:37:51,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:38:29] 2025-10-12 19:37:53,092 | INFO     | time since job start (2860s) is within the limit (172800.0s)
[2025-10-12 15:38:29] 2025-10-12 19:37:53,665 | INFO     | monitor loop #208: job 0:6840182248 is in state 'finished'
[2025-10-12 15:38:29] 2025-10-12 19:37:53,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:38:29] 2025-10-12 19:37:55,099 | INFO     | time since job start (2862s) is within the limit (172800.0s)
[2025-10-12 15:38:29] 2025-10-12 19:37:55,753 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 15:38:29] 2025-10-12 19:37:55,762 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3792.357906249999
[2025-10-12 15:38:29] 2025-10-12 19:37:55,787 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840182248/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:38:29] 2025-10-12 19:37:55,787 | INFO     | extracted standard info from prmon json
[2025-10-12 15:38:29] 2025-10-12 19:37:55,787 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:38:29] 2025-10-12 19:37:55,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:38:29] 2025-10-12 19:37:55,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:38:29] 2025-10-12 19:37:55,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:38:29] 2025-10-12 19:37:55,792 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:38:29] 2025-10-12 19:37:55,792 | INFO     | sum of square deviations: 18384184.769230794
[2025-10-12 15:38:29] 2025-10-12 19:37:55,792 | INFO     | sum of deviations: -197559439.69230768
[2025-10-12 15:38:29] 2025-10-12 19:37:55,792 | INFO     | mean x: 1760296517.0769231
[2025-10-12 15:38:29] 2025-10-12 19:37:55,792 | INFO     | mean y: 2653959.230769231
[2025-10-12 15:38:29] 2025-10-12 19:37:55,792 | INFO     | -- intersect: 18919086641.52633
[2025-10-12 15:38:29] 2025-10-12 19:37:55,792 | INFO     | intersect: 18919086641.52633
[2025-10-12 15:38:29] 2025-10-12 19:37:55,792 | INFO     | chi2: 0.002857593024284568
[2025-10-12 15:38:29] 2025-10-12 19:37:55,792 | INFO     | -- intersect: 18919086641.52633
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | current memory leak: -10.75 B/s (using 39 data points, chi2=0.00)
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | could have reported an average CPU frequency of 3793 MHz (5 samples)
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | ..............................
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | . Timing measurements:
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | . get job = 0 s
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | . initial setup = 2 s
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | . payload setup = 12 s
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | . stage-in = 0 s
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | . payload execution = 2807 s
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | . stage-out = 1 s
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | . log creation = 0 s
[2025-10-12 15:38:29] 2025-10-12 19:37:55,793 | INFO     | ..............................
[2025-10-12 15:38:29] 2025-10-12 19:37:56,315 | INFO     | 
[2025-10-12 15:38:29] 2025-10-12 19:37:56,315 | INFO     | job summary report
[2025-10-12 15:38:29] 2025-10-12 19:37:56,315 | INFO     | --------------------------------------------------
[2025-10-12 15:38:29] 2025-10-12 19:37:56,315 | INFO     | PanDA job id: 6840182248
[2025-10-12 15:38:29] 2025-10-12 19:37:56,315 | INFO     | task id: 46676269
[2025-10-12 15:38:29] 2025-10-12 19:37:56,315 | INFO     | errors: (none)
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | pilot state: finished 
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | transexitcode: 0
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | exeerrorcode: 0
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | exeerrordiag: 
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | exitcode: 0
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | exitmsg: OK
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | cpuconsumptiontime: 23266 s
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | nevents: 400
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | neventsw: 0
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | pid: 3322418
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | pgrp: 3322418
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | corecount: 10
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | event service: False
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | sizes: {0: 2348857, 1: 2348885, 9: 2349147, 11: 2349175, 2823: 2374557, 2824: 2374556, 2825: 2383738, 2827: 2383794, 2845: 2384020}
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | --------------------------------------------------
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | 
[2025-10-12 15:38:29] 2025-10-12 19:37:56,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:38:29] 2025-10-12 19:37:56,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:38:29] 2025-10-12 19:37:56,347 | INFO     | job 6840182248 has completed (purged errors)
[2025-10-12 15:38:29] 2025-10-12 19:37:56,347 | INFO     | overall cleanup function is called
[2025-10-12 15:38:29] 2025-10-12 19:37:57,354 | INFO     | --- collectZombieJob: --- 10, [3322418]
[2025-10-12 15:38:29] 2025-10-12 19:37:57,354 | INFO     | zombie collector waiting for pid 3322418
[2025-10-12 15:38:29] 2025-10-12 19:37:57,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:38:29] 2025-10-12 19:37:57,354 | INFO     | collected zombie processes
[2025-10-12 15:38:29] 2025-10-12 19:37:57,354 | INFO     | will attempt to kill all subprocesses of pid=3322418
[2025-10-12 15:38:29] 2025-10-12 19:37:58,134 | INFO     | process IDs to be killed: [3322418] (in reverse order)
[2025-10-12 15:38:29] 2025-10-12 19:37:58,423 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:38:29] 2025-10-12 19:37:58,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:38:29] 2025-10-12 19:37:58,445 | INFO     | did not find any defunct processes belonging to 3322418
[2025-10-12 15:38:29] 2025-10-12 19:37:58,465 | INFO     | did not find any defunct processes belonging to 3322418
[2025-10-12 15:38:29] 2025-10-12 19:37:58,465 | INFO     | ready for new job
[2025-10-12 15:38:29] 2025-10-12 19:37:58,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:38:29] 2025-10-12 19:37:58,467 | INFO     | ***************************************
[2025-10-12 15:38:29] 2025-10-12 19:37:58,467 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:38:29] 2025-10-12 19:37:58,467 | INFO     | ***************************************
[2025-10-12 15:38:29] 2025-10-12 19:37:58,467 | INFO     | 
[2025-10-12 15:38:29] 2025-10-12 19:37:58,471 | INFO     | architecture information:
[2025-10-12 15:38:29] 2025-10-12 19:37:58,471 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:38:29] 2025-10-12 19:37:58,502 | INFO     | cat /etc/os-release:
[2025-10-12 15:38:29] NAME="CentOS Linux"
[2025-10-12 15:38:29] VERSION="7 (Core)"
[2025-10-12 15:38:29] ID="centos"
[2025-10-12 15:38:29] ID_LIKE="rhel fedora"
[2025-10-12 15:38:29] VERSION_ID="7"
[2025-10-12 15:38:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:38:29] ANSI_COLOR="0;31"
[2025-10-12 15:38:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:38:29] HOME_URL="https://www.centos.org/"
[2025-10-12 15:38:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:38:29] 
[2025-10-12 15:38:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:38:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:38:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:38:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:38:29] 
[2025-10-12 15:38:29] 2025-10-12 19:37:58,502 | INFO     | ***************************************
[2025-10-12 15:38:29] 2025-10-12 19:37:59,005 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 15:38:29] 2025-10-12 19:37:59,041 | INFO     | sufficient remaining disk space (170701881344 B)
[2025-10-12 15:38:29] 2025-10-12 19:37:59,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:38:29] 2025-10-12 19:37:59,042 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:38:29] 2025-10-12 19:37:59,042 | INFO     | update_server=False
[2025-10-12 15:38:29] 2025-10-12 19:37:59,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:38:29] 2025-10-12 19:37:59,116 | INFO     | all data control threads have been joined
[2025-10-12 15:38:29] 2025-10-12 19:37:59,428 | INFO     | all payload control threads have been joined
[2025-10-12 15:38:29] 2025-10-12 19:37:59,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:38:29] 2025-10-12 19:37:59,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:38:29] 2025-10-12 19:37:59,692 | INFO     | aborting loop
[2025-10-12 15:38:29] 2025-10-12 19:38:00,047 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:00,122 | INFO     | [data] control thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:00,137 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:00,205 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:00,327 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:00,434 | INFO     | [payload] control thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:00,698 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:00,721 | INFO     | all job control threads have been joined
[2025-10-12 15:38:29] 2025-10-12 19:38:00,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:38:29] 2025-10-12 19:38:01,054 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:01,305 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:01,352 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:01,352 | INFO     | [job] validate thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:01,475 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:01,727 | INFO     | [job] control thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:01,894 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:02,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:38:29] 2025-10-12 19:38:06,028 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:09,507 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:38:29] 2025-10-12 19:38:10,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:38:29] 2025-10-12 19:38:17,369 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:38:29] 2025-10-12 19:38:18,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354314159936)>', '<ExcThread(monitor, started 140353667581696)>']
[2025-10-12 15:38:29] 2025-10-12 19:38:23,916 | INFO     | all workflow threads have been joined
[2025-10-12 15:38:29] 2025-10-12 19:38:23,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:38:29] 2025-10-12 19:38:23,919 | INFO     | traces error code: 0
[2025-10-12 15:38:29] 2025-10-12 19:38:23,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:38:29] 2025-10-12 19:38:28,642 | INFO     | PID=3311373 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:38:29] 2025-10-12 19:38:28,642 | INFO     | .. there are 31 such processes running
[2025-10-12 15:38:29] 2025-10-12 19:38:28,643 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:38:29] 2025-10-12 19:38:28,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:38:29] 2025-10-12 19:38:28,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:38:29] 2025-10-12 19:38:28,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:38:29] 2025-10-12 19:38:28,643 | INFO     | [monitor] control thread has ended
[2025-10-12 15:38:29] 2025-10-12 19:38:28,942 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:38:29] 2025-10-12 19:38:28,956 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:38:29] 2025-10-12 19:38:28,966 [wrapper] pilotpid: 3311373
[2025-10-12 15:38:29] 2025-10-12 19:38:28,975 [wrapper] Pilot exit status: 0
[2025-10-12 15:38:29] 2025-10-12 19:38:29,048 [wrapper] pandaids: 6840182248
[2025-10-12 15:38:29] 2025-10-12 19:38:29,222 [wrapper] cleanup supervisor_pilot 3588820 3311374
[2025-10-12 15:38:29] 2025-10-12 19:38:29,238 [wrapper] Test setup, not cleaning
[2025-10-12 15:38:29] 2025-10-12 19:38:29,261 [wrapper] apfmon messages muted
[2025-10-12 15:38:29] 2025-10-12 19:38:29,304 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:38:29] 2025-10-12 19:38:29,311 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:38:29]  *** Error codes and diagnostics ***
[2025-10-12 15:38:29]     "exeErrorCode": 0,
[2025-10-12 15:38:29]     "exeErrorDiag": "",
[2025-10-12 15:38:29]     "pilotErrorCode": 0,
[2025-10-12 15:38:29]     "pilotErrorDiag": "",
[2025-10-12 15:38:29]  *** Listing of results directory ***
[2025-10-12 15:38:29] total 406812
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 15:38:29] -rwx------. 1 boincer umatlas     36292 Oct 12 10:42 runpilot2-wrapper.sh
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:42 queuedata.json
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:38:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:49 run_atlas
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:49 job.xml
[2025-10-12 15:38:29] -rw-r--r--. 2 boincer umatlas 219789106 Oct 12 14:49 EVNT.46676267._004526.pool.root.1
[2025-10-12 15:38:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:49 shared
[2025-10-12 15:38:29] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 14:49 input.tar.gz
[2025-10-12 15:38:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:49 start_atlas.sh
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:49 boinc_lockfile
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:49 pandaJob.out
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas    975528 Oct 12 14:50 agis_schedconf.cvmfs.json
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:38:29] drwx------. 5 boincer umatlas      4096 Oct 12 14:50 pilot3
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 15:28 init_data.xml
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas 191371997 Oct 12 15:37 HITS.46676269._081095.pool.root.1
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas       529 Oct 12 15:37 boinc_task_state.xml
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas      1048 Oct 12 15:37 memory_monitor_summary.json
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas    327604 Oct 12 15:37 log.46676269._081095.job.log.tgz.1
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas      7801 Oct 12 15:37 heartbeat.json
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas        95 Oct 12 15:38 pilot_heartbeat.json
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas       823 Oct 12 15:38 pilotlog.txt
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:38 wrapper_checkpoint.txt
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:38 boinc_mmap_file
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas    433339 Oct 12 15:38 log.46676269._081095.job.log.1
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas       357 Oct 12 15:38 output.list
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:38 runtime_log
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas    778240 Oct 12 15:38 result.tar.gz
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 15:38 runtime_log.err
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas       657 Oct 12 15:38 Gg1MDmZSCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm68TMDmuyJ42m.diag
[2025-10-12 15:38:29] -rw-r--r--. 1 boincer umatlas     22287 Oct 12 15:38 stderr.txt
[2025-10-12 15:38:29] HITS file was successfully produced:
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas 191371997 Oct 12 15:37 shared/HITS.pool.root.1
[2025-10-12 15:38:29]  *** Contents of shared directory: ***
[2025-10-12 15:38:29] total 402868
[2025-10-12 15:38:29] -rw-r--r--. 2 boincer umatlas 219789106 Oct 12 14:49 ATLAS.root_0
[2025-10-12 15:38:29] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 14:49 input.tar.gz
[2025-10-12 15:38:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:49 start_atlas.sh
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas 191371997 Oct 12 15:37 HITS.pool.root.1
[2025-10-12 15:38:29] -rw-------. 1 boincer umatlas    778240 Oct 12 15:38 result.tar.gz
15:38:30 (3302183): run_atlas exited; CPU time 23331.640881
15:38:30 (3302183): called boinc_finish(0)

</stderr_txt>
]]>

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