Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:32:29 (485836): wrapper (7.7.26015): starting
18:32:29 (485836): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:32:29] Arguments: --nthreads 8
[2025-10-12 18:32:29] Threads: 8
[2025-10-12 18:32:29] Checking for CVMFS
[2025-10-12 18:32:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:32:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:32:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:32:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:32:52] 2.13.2.0 2356181 129867 270048 151640 1 411 30524932 32935937 21102 16776704 0 123674864 99.728 93001657 30460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 18:32:52] CVMFS is ok
[2025-10-12 18:32:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:32:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:32:52] Further information can be found at the LHC@home message board.
[2025-10-12 18:32:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:32:52] Checking for apptainer binary...
[2025-10-12 18:32:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:32:52] Running /usr/bin/apptainer --version
[2025-10-12 18:32:52] apptainer version 1.4.3-1.el9
[2025-10-12 18:32:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:32:53] c-6-2.aglt2.org
[2025-10-12 18:32:53] apptainer works
[2025-10-12 18:32:53] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:32:53] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:32:53] Starting ATLAS job with PandaID=6840181406
[2025-10-12 18:32:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:53:24]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:53:24] 2025-10-13 03:52:24,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:53:24] 2025-10-13 03:52:24,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:53:24] 2025-10-13 03:52:24,933 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:53:24] 2025-10-13 03:52:24,934 | INFO     | sum of square deviations: 9416390173.538475
[2025-10-12 23:53:24] 2025-10-13 03:52:24,936 | INFO     | sum of deviations: -37498380548.5769
[2025-10-12 23:53:24] 2025-10-13 03:52:24,936 | INFO     | mean x: 1760318018.0384614
[2025-10-12 23:53:24] 2025-10-13 03:52:24,937 | INFO     | mean y: 2128988.1314102565
[2025-10-12 23:53:24] 2025-10-13 03:52:24,937 | INFO     | -- intersect: 7012148083.603757
[2025-10-12 23:53:24] 2025-10-13 03:52:24,937 | INFO     | intersect: 7012148083.603757
[2025-10-12 23:53:24] 2025-10-13 03:52:24,937 | INFO     | chi2: 3.212788787059318
[2025-10-12 23:53:24] 2025-10-13 03:52:24,938 | INFO     | sum of square deviations: 8970965113.635138
[2025-10-12 23:53:24] 2025-10-13 03:52:24,940 | INFO     | sum of deviations: -21655982833.66126
[2025-10-12 23:53:24] 2025-10-13 03:52:24,941 | INFO     | mean x: 1760317865.5602605
[2025-10-12 23:53:24] 2025-10-13 03:52:24,941 | INFO     | mean y: 2134336.765472313
[2025-10-12 23:53:24] 2025-10-13 03:52:24,941 | INFO     | -- intersect: 4251555998.256362
[2025-10-12 23:53:24] 2025-10-13 03:52:24,941 | INFO     | intersect: 4251555998.256362
[2025-10-12 23:53:24] 2025-10-13 03:52:24,941 | INFO     | chi2: 2.561341977302431
[2025-10-12 23:53:24] 2025-10-13 03:52:24,942 | INFO     | current chi2=2.561341977302431 (change=20.276677146684126 %)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,942 | INFO     | right removable region: 306
[2025-10-12 23:53:24] 2025-10-13 03:52:24,942 | INFO     | sum of square deviations: 8970710011.635132
[2025-10-12 23:53:24] 2025-10-13 03:52:24,945 | INFO     | sum of deviations: -85943338544.46269
[2025-10-12 23:53:24] 2025-10-13 03:52:24,945 | INFO     | mean x: 1760318170.5602605
[2025-10-12 23:53:24] 2025-10-13 03:52:24,945 | INFO     | mean y: 2145482.7817589575
[2025-10-12 23:53:24] 2025-10-13 03:52:24,945 | INFO     | -- intersect: 16866766040.375038
[2025-10-12 23:53:24] 2025-10-13 03:52:24,945 | INFO     | intersect: 16866766040.375038
[2025-10-12 23:53:24] 2025-10-13 03:52:24,946 | INFO     | chi2: 1.5388479195600016
[2025-10-12 23:53:24] 2025-10-13 03:52:24,946 | INFO     | current chi2=1.5388479195600016 (change=52.102424978626836 %)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,946 | INFO     | sum of square deviations: 8539290701.76157
[2025-10-12 23:53:24] 2025-10-13 03:52:24,949 | INFO     | sum of deviations: -89804370318.54971
[2025-10-12 23:53:24] 2025-10-13 03:52:24,949 | INFO     | mean x: 1760318323.0860927
[2025-10-12 23:53:24] 2025-10-13 03:52:24,949 | INFO     | mean y: 2146834.059602649
[2025-10-12 23:53:24] 2025-10-13 03:52:24,949 | INFO     | -- intersect: 18514724059.278168
[2025-10-12 23:53:24] 2025-10-13 03:52:24,949 | INFO     | intersect: 18514724059.278168
[2025-10-12 23:53:24] 2025-10-13 03:52:24,950 | INFO     | chi2: 1.496793716625989
[2025-10-12 23:53:24] 2025-10-13 03:52:24,950 | INFO     | current chi2=1.496793716625989 (change=2.7328368449844582 %)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,950 | INFO     | left removable region: 20
[2025-10-12 23:53:24] 2025-10-13 03:52:24,950 | INFO     | sum of square deviations: 7252439255.681839
[2025-10-12 23:53:24] 2025-10-13 03:52:24,953 | INFO     | sum of deviations: -47247430734.136375
[2025-10-12 23:53:24] 2025-10-13 03:52:24,953 | INFO     | mean x: 1760318445.1363637
[2025-10-12 23:53:24] 2025-10-13 03:52:24,953 | INFO     | mean y: 2142290.8496503495
[2025-10-12 23:53:24] 2025-10-13 03:52:24,953 | INFO     | -- intersect: 11470080301.008646
[2025-10-12 23:53:24] 2025-10-13 03:52:24,953 | INFO     | intersect: 11470080301.008646
[2025-10-12 23:53:24] 2025-10-13 03:52:24,954 | INFO     | chi2: 0.7250794516087058
[2025-10-12 23:53:24] 2025-10-13 03:52:24,954 | INFO     | -- intersect: 11470080301.008646
[2025-10-12 23:53:24] 2025-10-13 03:52:24,954 | INFO     | current memory leak: -6.51 B/s (using 286 data points, chi2=0.73)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | could have reported an average CPU frequency of 2600 MHz (14 samples)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | ..............................
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | . Timing measurements:
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | . get job = 0 s
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | . initial setup = 3 s
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | . payload setup = 31 s
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | . stage-in = 0 s
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | . payload execution = 19017 s
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | . stage-out = 2 s
[2025-10-12 23:53:24] 2025-10-13 03:52:24,955 | INFO     | . log creation = 0 s
[2025-10-12 23:53:24] 2025-10-13 03:52:24,956 | INFO     | ..............................
[2025-10-12 23:53:24] 2025-10-13 03:52:24,986 | INFO     | sufficient remaining disk space (75824627712 B)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,986 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,987 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6840181406: 3372623 B (within 2537553920 B limit)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,987 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6840181406/HITS.46676269._080365.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,987 | INFO     | total size of present files: 0 B (workdir size: 3372623 B)
[2025-10-12 23:53:24] 2025-10-13 03:52:24,987 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6840181406/HITS.46676269._080365.pool.root.1 since it does not exist
[2025-10-12 23:53:24] 2025-10-13 03:52:25,231 | INFO     | 
[2025-10-12 23:53:24] 2025-10-13 03:52:25,231 | INFO     | job summary report
[2025-10-12 23:53:24] 2025-10-13 03:52:25,231 | INFO     | --------------------------------------------------
[2025-10-12 23:53:24] 2025-10-13 03:52:25,231 | INFO     | PanDA job id: 6840181406
[2025-10-12 23:53:24] 2025-10-13 03:52:25,231 | INFO     | task id: 46676269
[2025-10-12 23:53:24] 2025-10-13 03:52:25,231 | INFO     | errors: (none)
[2025-10-12 23:53:24] 2025-10-13 03:52:25,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | pilot state: finished 
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | transexitcode: 0
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | exeerrorcode: 0
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | exeerrordiag: 
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | exitcode: 0
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | exitmsg: OK
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | cpuconsumptiontime: 46787 s
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | nevents: 400
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | neventsw: 0
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | pid: 498305
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | pgrp: 498305
[2025-10-12 23:53:24] 2025-10-13 03:52:25,232 | INFO     | corecount: 8
[2025-10-12 23:53:24] 2025-10-13 03:52:25,233 | INFO     | event service: False
[2025-10-12 23:53:24] 2025-10-13 03:52:25,233 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 28: 2349203, 34: 2349231, 19053: 2381763, 19057: 2390761, 19059: 2390817, 19069: 2391039}
[2025-10-12 23:53:24] 2025-10-13 03:52:25,233 | INFO     | --------------------------------------------------
[2025-10-12 23:53:24] 2025-10-13 03:52:25,233 | INFO     | 
[2025-10-12 23:53:24] 2025-10-13 03:52:25,233 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:53:24] 2025-10-13 03:52:25,299 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,300 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,300 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,300 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,302 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:53:24] 2025-10-13 03:52:25,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,302 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:53:24] 2025-10-13 03:52:25,302 | INFO     | job 6840181406 has completed (purged errors)
[2025-10-12 23:53:24] 2025-10-13 03:52:25,302 | INFO     | overall cleanup function is called
[2025-10-12 23:53:24] 2025-10-13 03:52:25,648 | INFO     | number of running child processes to parent process 498305: 1
[2025-10-12 23:53:24] 2025-10-13 03:52:25,649 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:53:24] 2025-10-13 03:52:25,649 | INFO     | aborting job monitoring since job object (job id=6840181406) has expired
[2025-10-12 23:53:24] 2025-10-13 03:52:26,318 | INFO     | --- collectZombieJob: --- 10, [498305]
[2025-10-12 23:53:24] 2025-10-13 03:52:26,318 | INFO     | zombie collector waiting for pid 498305
[2025-10-12 23:53:24] 2025-10-13 03:52:26,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:53:24] 2025-10-13 03:52:26,319 | INFO     | collected zombie processes
[2025-10-12 23:53:24] 2025-10-13 03:52:26,319 | INFO     | will attempt to kill all subprocesses of pid=498305
[2025-10-12 23:53:24] 2025-10-13 03:52:26,653 | INFO     | process IDs to be killed: [498305] (in reverse order)
[2025-10-12 23:53:24] 2025-10-13 03:52:26,770 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:53:24] 2025-10-13 03:52:26,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:53:24] 2025-10-13 03:52:26,805 | INFO     | did not find any defunct processes belonging to 498305
[2025-10-12 23:53:24] 2025-10-13 03:52:26,817 | INFO     | did not find any defunct processes belonging to 498305
[2025-10-12 23:53:24] 2025-10-13 03:52:26,817 | INFO     | ready for new job
[2025-10-12 23:53:24] 2025-10-13 03:52:26,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:53:24] 2025-10-13 03:52:26,820 | INFO     | ***************************************
[2025-10-12 23:53:24] 2025-10-13 03:52:26,820 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:53:24] 2025-10-13 03:52:26,820 | INFO     | ***************************************
[2025-10-12 23:53:24] 2025-10-13 03:52:26,820 | INFO     | 
[2025-10-12 23:53:24] 2025-10-13 03:52:26,834 | INFO     | architecture information:
[2025-10-12 23:53:24] 2025-10-13 03:52:26,852 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:53:24] 2025-10-13 03:52:26,873 | INFO     | cat /etc/os-release:
[2025-10-12 23:53:24] NAME="CentOS Linux"
[2025-10-12 23:53:24] VERSION="7 (Core)"
[2025-10-12 23:53:24] ID="centos"
[2025-10-12 23:53:24] ID_LIKE="rhel fedora"
[2025-10-12 23:53:24] VERSION_ID="7"
[2025-10-12 23:53:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:53:24] ANSI_COLOR="0;31"
[2025-10-12 23:53:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:53:24] HOME_URL="https://www.centos.org/"
[2025-10-12 23:53:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:53:24] 
[2025-10-12 23:53:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:53:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:53:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:53:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:53:24] 
[2025-10-12 23:53:24] 2025-10-13 03:52:26,873 | INFO     | ***************************************
[2025-10-12 23:53:24] 2025-10-13 03:52:27,377 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:53:24] 2025-10-13 03:52:27,418 | INFO     | sufficient remaining disk space (75829870592 B)
[2025-10-12 23:53:24] 2025-10-13 03:52:27,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:53:24] 2025-10-13 03:52:27,418 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:53:24] 2025-10-13 03:52:27,419 | INFO     | update_server=False
[2025-10-12 23:53:24] 2025-10-13 03:52:27,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:53:24] 2025-10-13 03:52:27,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:53:24] 2025-10-13 03:52:27,441 | INFO     | aborting loop
[2025-10-12 23:53:24] 2025-10-13 03:52:27,561 | INFO     | all payload control threads have been joined
[2025-10-12 23:53:24] 2025-10-13 03:52:27,623 | INFO     | all job control threads have been joined
[2025-10-12 23:53:24] 2025-10-13 03:52:28,236 | INFO     | all data control threads have been joined
[2025-10-12 23:53:24] 2025-10-13 03:52:28,425 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:28,448 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:28,471 | INFO     | [job] validate thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:28,477 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:28,538 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:28,567 | INFO     | [payload] control thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:28,643 | INFO     | [job] control thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:28,699 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:53:24] 2025-10-13 03:52:28,917 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:29,086 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:29,113 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:29,244 | INFO     | [data] control thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:29,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:29,825 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:30,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:53:24] 2025-10-13 03:52:30,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:53:24] 2025-10-13 03:52:30,709 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:31,258 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:34,610 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:53:24] 2025-10-13 03:52:58,608 | INFO     | PID=490334 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:53:24] 2025-10-13 03:52:58,609 | INFO     | .. there are 25 such processes running
[2025-10-12 23:53:24] 2025-10-13 03:52:58,609 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:53:24] 2025-10-13 03:52:58,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:53:24] 2025-10-13 03:52:58,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:53:24] 2025-10-13 03:53:17,112 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:53:24] 2025-10-13 03:53:18,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139739923879744)>', '<ExcThread(monitor, started 139738757453568)>']
[2025-10-12 23:53:24] 2025-10-13 03:53:18,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:53:24] 2025-10-13 03:53:18,774 | INFO     | [monitor] control thread has ended
[2025-10-12 23:53:24] 2025-10-13 03:53:23,145 | INFO     | all workflow threads have been joined
[2025-10-12 23:53:24] 2025-10-13 03:53:23,146 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:53:24] 2025-10-13 03:53:23,146 | INFO     | traces error code: 0
[2025-10-12 23:53:24] 2025-10-13 03:53:23,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:53:24] 2025-10-13 03:53:23,328 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:53:24] 2025-10-13 03:53:23,335 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:53:24] 2025-10-13 03:53:23,337 [wrapper] pilotpid: 490334
[2025-10-12 23:53:24] 2025-10-13 03:53:23,340 [wrapper] Pilot exit status: 0
[2025-10-12 23:53:24] 2025-10-13 03:53:23,450 [wrapper] pandaids: 6840181406
[2025-10-12 23:53:24] 2025-10-13 03:53:23,701 [wrapper] cleanup supervisor_pilot 1279152 490335
[2025-10-12 23:53:24] 2025-10-13 03:53:23,746 [wrapper] Test setup, not cleaning
[2025-10-12 23:53:24] 2025-10-13 03:53:23,807 [wrapper] apfmon messages muted
[2025-10-12 23:53:24] 2025-10-13 03:53:23,842 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:53:24] 2025-10-13 03:53:23,860 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:53:24]  *** Error codes and diagnostics ***
[2025-10-12 23:53:24]     "exeErrorCode": 0,
[2025-10-12 23:53:24]     "exeErrorDiag": "",
[2025-10-12 23:53:24]     "pilotErrorCode": 0,
[2025-10-12 23:53:24]     "pilotErrorDiag": "",
[2025-10-12 23:53:24]  *** Listing of results directory ***
[2025-10-12 23:53:24] total 402680
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:11 queuedata.json
[2025-10-12 23:53:24] -rwx------. 1 boincer umatlas     36292 Oct 12 10:11 runpilot2-wrapper.sh
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:53:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:32 run_atlas
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:32 job.xml
[2025-10-12 23:53:24] -rw-r--r--. 2 boincer umatlas 219966092 Oct 12 18:32 EVNT.46676267._004217.pool.root.1
[2025-10-12 23:53:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:32 start_atlas.sh
[2025-10-12 23:53:24] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:32 shared
[2025-10-12 23:53:24] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 18:32 input.tar.gz
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:32 boinc_lockfile
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 18:32 pandaJob.out
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas    975603 Oct 12 18:33 agis_schedconf.cvmfs.json
[2025-10-12 23:53:24] drwx------. 5 boincer umatlas      4096 Oct 12 18:33 pilot3
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas      6656 Oct 12 23:48 init_data.xml
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas 182840888 Oct 12 23:51 HITS.46676269._080365.pool.root.1
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas       531 Oct 12 23:51 boinc_task_state.xml
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas      1044 Oct 12 23:52 memory_monitor_summary.json
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas    505215 Oct 12 23:52 log.46676269._080365.job.log.tgz.1
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas      7825 Oct 12 23:52 heartbeat.json
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas        95 Oct 12 23:52 pilot_heartbeat.json
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas      4823 Oct 12 23:53 pilotlog.txt
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:53 wrapper_checkpoint.txt
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:53 boinc_mmap_file
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas   2314050 Oct 12 23:53 log.46676269._080365.job.log.1
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas       357 Oct 12 23:53 output.list
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:53 runtime_log
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas   2836480 Oct 12 23:53 result.tar.gz
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 23:53 runtime_log.err
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas       656 Oct 12 23:53 MiIKDmhyBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvBkNDmYMITum.diag
[2025-10-12 23:53:24] -rw-r--r--. 1 boincer umatlas     21438 Oct 12 23:53 stderr.txt
[2025-10-12 23:53:24] HITS file was successfully produced:
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas 182840888 Oct 12 23:51 shared/HITS.pool.root.1
[2025-10-12 23:53:24]  *** Contents of shared directory: ***
[2025-10-12 23:53:24] total 396720
[2025-10-12 23:53:24] -rw-r--r--. 2 boincer umatlas 219966092 Oct 12 18:32 ATLAS.root_0
[2025-10-12 23:53:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:32 start_atlas.sh
[2025-10-12 23:53:24] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 18:32 input.tar.gz
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas 182840888 Oct 12 23:51 HITS.pool.root.1
[2025-10-12 23:53:24] -rw-------. 1 boincer umatlas   2836480 Oct 12 23:53 result.tar.gz
23:53:25 (485836): run_atlas exited; CPU time 47328.911420
23:53:25 (485836): called boinc_finish(0)

</stderr_txt>
]]>

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