Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
19:59:32 (2571148): wrapper (7.7.26015): starting
19:59:32 (2571148): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:59:32] Arguments: --nthreads 8
[2025-10-12 19:59:32] Threads: 8
[2025-10-12 19:59:32] Checking for CVMFS
[2025-10-12 19:59:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:59:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:59:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:59:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:59:32] 2.13.2.0 8166 1909 57772 151630 3 188 3259923 4096000 5755 130560 0 6636005 99.998 72183 364 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 19:59:32] CVMFS is ok
[2025-10-12 19:59:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:59:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 19:59:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 19:59:32] Further information can be found at the LHC@home message board.
[2025-10-12 19:59:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:59:32] Checking for apptainer binary...
[2025-10-12 19:59:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:59:32] Running /usr/bin/apptainer --version
[2025-10-12 19:59:32] apptainer version 1.4.2
[2025-10-12 19:59:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:59:32] JM7
[2025-10-12 19:59:32] apptainer works
[2025-10-12 19:59:32] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:59:32] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:59:32] Starting ATLAS job with PandaID=6840223509
[2025-10-12 19:59:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:56:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:56:00] 2025-10-12 19:55:20,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:56:00] 2025-10-12 19:55:20,473 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:56:00] 2025-10-12 19:55:20,473 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:56:00] 2025-10-12 19:55:20,476 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:56:00] 2025-10-12 19:55:20,477 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 21:56:00] 2025-10-12 19:55:20,477 | INFO     | sum of deviations: 11067533566.499994
[2025-10-12 21:56:00] 2025-10-12 19:55:20,478 | INFO     | mean x: 1760295455.5
[2025-10-12 21:56:00] 2025-10-12 19:55:20,478 | INFO     | mean y: 2412877.236842105
[2025-10-12 21:56:00] 2025-10-12 19:55:20,478 | INFO     | -- intersect: -42408425379.29033
[2025-10-12 21:56:00] 2025-10-12 19:55:20,478 | INFO     | intersect: -42408425379.29033
[2025-10-12 21:56:00] 2025-10-12 19:55:20,478 | INFO     | chi2: 2.2300199106651926
[2025-10-12 21:56:00] 2025-10-12 19:55:20,479 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,480 | INFO     | sum of deviations: 17904444768.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,480 | INFO     | mean x: 1760295303.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,480 | INFO     | mean y: 2430193.1834862386
[2025-10-12 21:56:00] 2025-10-12 19:55:20,480 | INFO     | -- intersect: -78489502957.56795
[2025-10-12 21:56:00] 2025-10-12 19:55:20,480 | INFO     | intersect: -78489502957.56795
[2025-10-12 21:56:00] 2025-10-12 19:55:20,480 | INFO     | chi2: 1.421734116940152
[2025-10-12 21:56:00] 2025-10-12 19:55:20,481 | INFO     | current chi2=1.421734116940152 (change=36.24567609730162 %)
[2025-10-12 21:56:00] 2025-10-12 19:55:20,481 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,482 | INFO     | sum of deviations: 16991995727.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,482 | INFO     | mean x: 1760295150.5
[2025-10-12 21:56:00] 2025-10-12 19:55:20,482 | INFO     | mean y: 2427554.153846154
[2025-10-12 21:56:00] 2025-10-12 19:55:20,482 | INFO     | -- intersect: -85758919854.33194
[2025-10-12 21:56:00] 2025-10-12 19:55:20,482 | INFO     | intersect: -85758919854.33194
[2025-10-12 21:56:00] 2025-10-12 19:55:20,482 | INFO     | chi2: 1.4231775171104533
[2025-10-12 21:56:00] 2025-10-12 19:55:20,483 | INFO     | current chi2=1.4231775171104533 (change=-0.10152391738391132 %)
[2025-10-12 21:56:00] 2025-10-12 19:55:20,483 | INFO     | right removable region: 103
[2025-10-12 21:56:00] 2025-10-12 19:55:20,483 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,484 | INFO     | sum of deviations: -5584259457.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,484 | INFO     | mean x: 1760295608.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,484 | INFO     | mean y: 2455940.5504587158
[2025-10-12 21:56:00] 2025-10-12 19:55:20,484 | INFO     | -- intersect: 24483494119.667404
[2025-10-12 21:56:00] 2025-10-12 19:55:20,484 | INFO     | intersect: 24483494119.667404
[2025-10-12 21:56:00] 2025-10-12 19:55:20,485 | INFO     | chi2: 0.8436263021314591
[2025-10-12 21:56:00] 2025-10-12 19:55:20,485 | INFO     | current chi2=0.8436263021314591 (change=62.16956189060152 %)
[2025-10-12 21:56:00] 2025-10-12 19:55:20,485 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,486 | INFO     | sum of deviations: -5503462944.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,486 | INFO     | mean x: 1760295760.5
[2025-10-12 21:56:00] 2025-10-12 19:55:20,486 | INFO     | mean y: 2455731.6346153845
[2025-10-12 21:56:00] 2025-10-12 19:55:20,486 | INFO     | -- intersect: 27779331893.28578
[2025-10-12 21:56:00] 2025-10-12 19:55:20,486 | INFO     | intersect: 27779331893.28578
[2025-10-12 21:56:00] 2025-10-12 19:55:20,487 | INFO     | chi2: 0.8439643429288947
[2025-10-12 21:56:00] 2025-10-12 19:55:20,487 | INFO     | current chi2=0.8439643429288947 (change=-0.040069968963927095 %)
[2025-10-12 21:56:00] 2025-10-12 19:55:20,487 | INFO     | left removable region: 20
[2025-10-12 21:56:00] 2025-10-12 19:55:20,487 | INFO     | sum of square deviations: 177275882.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,488 | INFO     | sum of deviations: 799925512.9999999
[2025-10-12 21:56:00] 2025-10-12 19:55:20,488 | INFO     | mean x: 1760295730.0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,488 | INFO     | mean y: 2478553.8554216865
[2025-10-12 21:56:00] 2025-10-12 19:55:20,488 | INFO     | -- intersect: -7940539125.514856
[2025-10-12 21:56:00] 2025-10-12 19:55:20,488 | INFO     | intersect: -7940539125.514856
[2025-10-12 21:56:00] 2025-10-12 19:55:20,489 | INFO     | chi2: 0.00031692743313017376
[2025-10-12 21:56:00] 2025-10-12 19:55:20,489 | INFO     | -- intersect: -7940539125.514856
[2025-10-12 21:56:00] 2025-10-12 19:55:20,489 | INFO     | current memory leak: 4.51 B/s (using 83 data points, chi2=0.00)
[2025-10-12 21:56:00] 2025-10-12 19:55:20,489 | INFO     | could have reported an average CPU frequency of 2316 MHz (7 samples)
[2025-10-12 21:56:00] 2025-10-12 19:55:20,490 | INFO     | ..............................
[2025-10-12 21:56:00] 2025-10-12 19:55:20,490 | INFO     | . Timing measurements:
[2025-10-12 21:56:00] 2025-10-12 19:55:20,490 | INFO     | . get job = 0 s
[2025-10-12 21:56:00] 2025-10-12 19:55:20,490 | INFO     | . initial setup = 2 s
[2025-10-12 21:56:00] 2025-10-12 19:55:20,490 | INFO     | . payload setup = 5 s
[2025-10-12 21:56:00] 2025-10-12 19:55:20,490 | INFO     | . stage-in = 0 s
[2025-10-12 21:56:00] 2025-10-12 19:55:20,491 | INFO     | . payload execution = 6903 s
[2025-10-12 21:56:00] 2025-10-12 19:55:20,491 | INFO     | . stage-out = 0 s
[2025-10-12 21:56:00] 2025-10-12 19:55:20,491 | INFO     | . log creation = 0 s
[2025-10-12 21:56:00] 2025-10-12 19:55:20,491 | INFO     | ..............................
[2025-10-12 21:56:00] 2025-10-12 19:55:20,603 | INFO     | 
[2025-10-12 21:56:00] 2025-10-12 19:55:20,604 | INFO     | job summary report
[2025-10-12 21:56:00] 2025-10-12 19:55:20,604 | INFO     | --------------------------------------------------
[2025-10-12 21:56:00] 2025-10-12 19:55:20,604 | INFO     | PanDA job id: 6840223509
[2025-10-12 21:56:00] 2025-10-12 19:55:20,604 | INFO     | task id: 46676269
[2025-10-12 21:56:00] 2025-10-12 19:55:20,604 | INFO     | errors: (none)
[2025-10-12 21:56:00] 2025-10-12 19:55:20,604 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:56:00] 2025-10-12 19:55:20,604 | INFO     | pilot state: finished 
[2025-10-12 21:56:00] 2025-10-12 19:55:20,604 | INFO     | transexitcode: 0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,605 | INFO     | exeerrorcode: 0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,605 | INFO     | exeerrordiag: 
[2025-10-12 21:56:00] 2025-10-12 19:55:20,605 | INFO     | exitcode: 0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,605 | INFO     | exitmsg: OK
[2025-10-12 21:56:00] 2025-10-12 19:55:20,605 | INFO     | cpuconsumptiontime: 51848 s
[2025-10-12 21:56:00] 2025-10-12 19:55:20,605 | INFO     | nevents: 400
[2025-10-12 21:56:00] 2025-10-12 19:55:20,605 | INFO     | neventsw: 0
[2025-10-12 21:56:00] 2025-10-12 19:55:20,605 | INFO     | pid: 2584184
[2025-10-12 21:56:00] 2025-10-12 19:55:20,606 | INFO     | pgrp: 2584184
[2025-10-12 21:56:00] 2025-10-12 19:55:20,606 | INFO     | corecount: 8
[2025-10-12 21:56:00] 2025-10-12 19:55:20,606 | INFO     | event service: False
[2025-10-12 21:56:00] 2025-10-12 19:55:20,606 | INFO     | sizes: {0: 2348693, 1: 2348892, 5: 2349154, 11: 2349210, 6913: 2376666, 6914: 2385678, 6918: 2385862, 6922: 2386056}
[2025-10-12 21:56:00] 2025-10-12 19:55:20,606 | INFO     | --------------------------------------------------
[2025-10-12 21:56:00] 2025-10-12 19:55:20,606 | INFO     | 
[2025-10-12 21:56:00] 2025-10-12 19:55:20,606 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-12 21:56:00] 2025-10-12 19:55:20,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,627 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,627 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,629 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:56:00] 2025-10-12 19:55:20,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:56:00] 2025-10-12 19:55:20,630 | INFO     | job 6840223509 has completed (purged errors)
[2025-10-12 21:56:00] 2025-10-12 19:55:20,630 | INFO     | overall cleanup function is called
[2025-10-12 21:56:00] 2025-10-12 19:55:21,636 | INFO     | --- collectZombieJob: --- 10, [2584184]
[2025-10-12 21:56:00] 2025-10-12 19:55:21,636 | INFO     | zombie collector waiting for pid 2584184
[2025-10-12 21:56:00] 2025-10-12 19:55:21,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:56:00] 2025-10-12 19:55:21,637 | INFO     | collected zombie processes
[2025-10-12 21:56:00] 2025-10-12 19:55:21,637 | INFO     | will attempt to kill all subprocesses of pid=2584184
[2025-10-12 21:56:00] 2025-10-12 19:55:22,029 | INFO     | process IDs to be killed: [2584184] (in reverse order)
[2025-10-12 21:56:00] 2025-10-12 19:55:22,120 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:56:00] 2025-10-12 19:55:22,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:56:00] 2025-10-12 19:55:22,130 | INFO     | did not find any defunct processes belonging to 2584184
[2025-10-12 21:56:00] 2025-10-12 19:55:22,138 | INFO     | did not find any defunct processes belonging to 2584184
[2025-10-12 21:56:00] 2025-10-12 19:55:22,138 | INFO     | ready for new job
[2025-10-12 21:56:00] 2025-10-12 19:55:22,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:56:00] 2025-10-12 19:55:22,142 | INFO     | ***************************************
[2025-10-12 21:56:00] 2025-10-12 19:55:22,142 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:56:00] 2025-10-12 19:55:22,142 | INFO     | ***************************************
[2025-10-12 21:56:00] 2025-10-12 19:55:22,142 | INFO     | 
[2025-10-12 21:56:00] 2025-10-12 19:55:22,146 | INFO     | architecture information:
[2025-10-12 21:56:00] 2025-10-12 19:55:22,147 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:56:00] 2025-10-12 19:55:22,162 | INFO     | cat /etc/os-release:
[2025-10-12 21:56:00] NAME="CentOS Linux"
[2025-10-12 21:56:00] VERSION="7 (Core)"
[2025-10-12 21:56:00] ID="centos"
[2025-10-12 21:56:00] ID_LIKE="rhel fedora"
[2025-10-12 21:56:00] VERSION_ID="7"
[2025-10-12 21:56:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:56:00] ANSI_COLOR="0;31"
[2025-10-12 21:56:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:56:00] HOME_URL="https://www.centos.org/"
[2025-10-12 21:56:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:56:00] 
[2025-10-12 21:56:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:56:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:56:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:56:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:56:00] 
[2025-10-12 21:56:00] 2025-10-12 19:55:22,163 | INFO     | ***************************************
[2025-10-12 21:56:00] 2025-10-12 19:55:22,666 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-12 21:56:00] 2025-10-12 19:55:22,683 | INFO     | sufficient remaining disk space (216858099712 B)
[2025-10-12 21:56:00] 2025-10-12 19:55:22,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:56:00] 2025-10-12 19:55:22,683 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:56:00] 2025-10-12 19:55:22,683 | INFO     | update_server=False
[2025-10-12 21:56:00] 2025-10-12 19:55:22,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:56:00] 2025-10-12 19:55:22,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:56:00] 2025-10-12 19:55:22,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:56:00] 2025-10-12 19:55:22,774 | INFO     | aborting loop
[2025-10-12 21:56:00] 2025-10-12 19:55:22,786 | INFO     | all payload control threads have been joined
[2025-10-12 21:56:00] 2025-10-12 19:55:23,158 | INFO     | all job control threads have been joined
[2025-10-12 21:56:00] 2025-10-12 19:55:23,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:56:00] 2025-10-12 19:55:23,432 | INFO     | all data control threads have been joined
[2025-10-12 21:56:00] 2025-10-12 19:55:23,689 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:23,775 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:23,792 | INFO     | [payload] control thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:23,918 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:23,940 | INFO     | [job] validate thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:23,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:24,158 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:24,163 | INFO     | [job] control thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:24,256 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:24,295 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:24,417 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:24,435 | INFO     | [data] control thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:24,616 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:25,208 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:25,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:56:00] 2025-10-12 19:55:26,616 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:26,688 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:56:00] 2025-10-12 19:55:52,445 | INFO     | PID=2575124 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:56:00] 2025-10-12 19:55:52,446 | INFO     | .. there are 8 such processes running
[2025-10-12 21:56:00] 2025-10-12 19:55:52,447 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:56:00] 2025-10-12 19:55:52,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:56:00] 2025-10-12 19:55:52,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:56:00] 2025-10-12 19:55:53,768 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:56:00] 2025-10-12 19:55:55,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131359555135296)>', '<ExcThread(monitor, started 131359066539776)>']
[2025-10-12 21:56:00] 2025-10-12 19:55:56,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:56:00] 2025-10-12 19:55:56,468 | INFO     | [monitor] control thread has ended
[2025-10-12 21:56:00] 2025-10-12 19:56:00,718 | INFO     | all workflow threads have been joined
[2025-10-12 21:56:00] 2025-10-12 19:56:00,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:56:00] 2025-10-12 19:56:00,719 | INFO     | traces error code: 0
[2025-10-12 21:56:00] 2025-10-12 19:56:00,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:56:00] 2025-10-12 19:56:00,837 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:56:00] 2025-10-12 19:56:00,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:56:00] 2025-10-12 19:56:00,843 [wrapper] pilotpid: 2575124
[2025-10-12 21:56:00] 2025-10-12 19:56:00,846 [wrapper] Pilot exit status: 0
[2025-10-12 21:56:00] 2025-10-12 19:56:00,857 [wrapper] pandaids: 6840223509
[2025-10-12 21:56:00] 2025-10-12 19:56:00,921 [wrapper] cleanup supervisor_pilot 2743728 2575125
[2025-10-12 21:56:00] 2025-10-12 19:56:00,925 [wrapper] Test setup, not cleaning
[2025-10-12 21:56:00] 2025-10-12 19:56:00,928 [wrapper] apfmon messages muted
[2025-10-12 21:56:00] 2025-10-12 19:56:00,931 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:56:00] 2025-10-12 19:56:00,933 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:56:00]  *** Error codes and diagnostics ***
[2025-10-12 21:56:00]     "exeErrorCode": 0,
[2025-10-12 21:56:00]     "exeErrorDiag": "",
[2025-10-12 21:56:00]     "pilotErrorCode": 0,
[2025-10-12 21:56:00]     "pilotErrorDiag": "",
[2025-10-12 21:56:00]  *** Listing of results directory ***
[2025-10-12 21:56:01] total 408660
[2025-10-12 21:56:01] -rw-r--r-- 1 josemi7 josemi7    557409 oct 12 17:00 pilot3.tar.gz
[2025-10-12 21:56:01] -rw-r--r-- 1 josemi7 josemi7      5112 oct 12 17:05 queuedata.json
[2025-10-12 21:56:01] -rwx------ 1 josemi7 josemi7     36292 oct 12 17:06 runpilot2-wrapper.sh
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7       100 oct 12 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:56:01] -rwxr-xr-x 1 josemi7 josemi7      7986 oct 12 19:59 run_atlas
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7       105 oct 12 19:59 job.xml
[2025-10-12 21:56:01] -rw-r--r-- 2 josemi7 josemi7 221430180 oct 12 19:59 EVNT.46676267._004547.pool.root.1
[2025-10-12 21:56:01] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 19:59 start_atlas.sh
[2025-10-12 21:56:01] drwxrwx--x 1 josemi7 josemi7        76 oct 12 19:59 shared
[2025-10-12 21:56:01] -rw-r--r-- 2 josemi7 josemi7    569684 oct 12 19:59 input.tar.gz
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7      6165 oct 12 19:59 init_data.xml
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 19:59 boinc_setup_complete
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 19:59 boinc_lockfile
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7      2550 oct 12 19:59 pandaJob.out
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7    975528 oct 12 19:59 agis_schedconf.cvmfs.json
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7   1560580 oct 12 19:59 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:56:01] drwx------ 1 josemi7 josemi7       414 oct 12 19:59 pilot3
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7 190456797 oct 12 21:54 HITS.46676269._081618.pool.root.1
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7       529 oct 12 21:54 boinc_task_state.xml
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7      1033 oct 12 21:55 memory_monitor_summary.json
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7    352841 oct 12 21:55 log.46676269._081618.job.log.tgz.1
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7      7770 oct 12 21:55 heartbeat.json
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7        95 oct 12 21:55 pilot_heartbeat.json
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7      8192 oct 12 21:55 boinc_mmap_file
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7        27 oct 12 21:55 wrapper_checkpoint.txt
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7      4831 oct 12 21:56 pilotlog.txt
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7    993554 oct 12 21:56 log.46676269._081618.job.log.1
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7       357 oct 12 21:56 output.list
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7       620 oct 12 21:56 runtime_log
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7   1361920 oct 12 21:56 result.tar.gz
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7      8729 oct 12 21:56 runtime_log.err
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7       639 oct 12 21:56 26vLDmNpCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNNkNDmykxuIn.diag
[2025-10-12 21:56:01] -rw-rw-r-- 1 josemi7 josemi7     20946 oct 12 21:56 stderr.txt
[2025-10-12 21:56:01] HITS file was successfully produced:
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7 190456797 oct 12 21:54 shared/HITS.pool.root.1
[2025-10-12 21:56:01]  *** Contents of shared directory: ***
[2025-10-12 21:56:01] total 404148
[2025-10-12 21:56:01] -rw-r--r-- 2 josemi7 josemi7 221430180 oct 12 19:59 ATLAS.root_0
[2025-10-12 21:56:01] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 19:59 start_atlas.sh
[2025-10-12 21:56:01] -rw-r--r-- 2 josemi7 josemi7    569684 oct 12 19:59 input.tar.gz
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7 190456797 oct 12 21:54 HITS.pool.root.1
[2025-10-12 21:56:01] -rw------- 1 josemi7 josemi7   1361920 oct 12 21:56 result.tar.gz
21:56:02 (2571148): run_atlas exited; CPU time 52059.805434
21:56:02 (2571148): called boinc_finish(0)

</stderr_txt>
]]>

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