Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:57:26 (11143): wrapper (7.7.26015): starting
13:57:26 (11143): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 13:57:26] Arguments: --nthreads 12
[2025-10-12 13:57:26] Threads: 12
[2025-10-12 13:57:26] Checking for CVMFS
[2025-10-12 13:57:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:57:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:57:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:57:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:57:26] 2.11.2.0 2945 223211 97236 151630 1 56 15838152 20275200 1 130560 2 110073113 99.984 13429301 12781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:57:26] CVMFS is ok
[2025-10-12 13:57:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:57:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:57:26] Further information can be found at the LHC@home message board.
[2025-10-12 13:57:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:57:26] Checking for apptainer binary...
[2025-10-12 13:57:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:57:26] Running /usr/bin/apptainer --version
[2025-10-12 13:57:26] apptainer version 1.3.2-1.el7
[2025-10-12 13:57:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:57:27] c-205-2.aglt2.org
[2025-10-12 13:57:27] apptainer works
[2025-10-12 13:57:27] Set ATHENA_PROC_NUMBER=12
[2025-10-12 13:57:27] Set ATHENA_CORE_NUMBER=12
[2025-10-12 13:57:27] Starting ATLAS job with PandaID=6840390774
[2025-10-12 13:57:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:13:14]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:13:14]  status=None
[2025-10-12 15:13:14]  status_code=0
[2025-10-12 15:13:14]  storage_token=
[2025-10-12 15:13:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840390774/log.46676269._083546.job.log.tgz.1
[2025-10-12 15:13:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/f3/log.46676269._083546.job.log.tgz.1
[2025-10-12 15:13:14]  workdir=None
[2025-10-12 15:13:14] ]
[2025-10-12 15:13:14] 2025-10-12 19:12:34,918 | INFO     | transferring file log.46676269._083546.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840390774/log.46676269._083546.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 15:13:14] 2025-10-12 19:12:34,918 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840390774/log.46676269._083546.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._083546.job
[2025-10-12 15:13:14] 2025-10-12 19:12:34,940 | INFO     | adding to output.list: log.46676269._083546.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/f3/log.46676269._083546.job.log.tg
[2025-10-12 15:13:14] 2025-10-12 19:12:34,941 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:13:14] 2025-10-12 19:12:34,941 | INFO     | summary of transferred files:
[2025-10-12 15:13:14] 2025-10-12 19:12:34,941 | INFO     |  -- lfn=log.46676269._083546.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:13:14] 2025-10-12 19:12:34,942 | INFO     | stage-out finished correctly
[2025-10-12 15:13:14] 2025-10-12 19:12:36,864 | INFO     | time since job start (4493s) is within the limit (172800.0s)
[2025-10-12 15:13:14] 2025-10-12 19:12:37,138 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:13:14] 2025-10-12 19:12:37,674 | INFO     | job 6840390774 has state=finished
[2025-10-12 15:13:14] 2025-10-12 19:12:37,675 | INFO     | preparing for final server update for job 6840390774 in state='finished'
[2025-10-12 15:13:14] 2025-10-12 19:12:37,675 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:13:14] 2025-10-12 19:12:37,675 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:13:14] 2025-10-12 19:12:37,676 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:13:14] 2025-10-12 19:12:37,676 | INFO     | job 6840390774 has finished - writing final server update
[2025-10-12 15:13:14] 2025-10-12 19:12:37,676 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:13:14] 2025-10-12 19:12:37,677 | INFO     | executing command: lscpu
[2025-10-12 15:13:14] 2025-10-12 19:12:37,703 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:13:14] 2025-10-12 19:12:38,865 | INFO     | time since job start (4495s) is within the limit (172800.0s)
[2025-10-12 15:13:14] 2025-10-12 19:12:39,427 | WARNING  | process 21230 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 15:13:14] 2025-10-12 19:12:39,427 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840390774/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:13:14] 2025-10-12 19:12:39,522 | INFO     | number of running child processes to parent process 21230: 1
[2025-10-12 15:13:14] 2025-10-12 19:12:39,522 | INFO     | maximum number of monitored processes: 6
[2025-10-12 15:13:14] 2025-10-12 19:12:40,457 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 15:13:14] 2025-10-12 19:12:40,870 | INFO     | time since job start (4497s) is within the limit (172800.0s)
[2025-10-12 15:13:14] 2025-10-12 19:12:42,025 | INFO     | monitor loop #334: job 0:6840390774 is in state 'finished'
[2025-10-12 15:13:14] 2025-10-12 19:12:42,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:13:14] 2025-10-12 19:12:42,424 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 15:13:14] 2025-10-12 19:12:42,428 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-10-12 15:13:14] 2025-10-12 19:12:42,430 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840390774/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:13:14] 2025-10-12 19:12:42,431 | INFO     | extracted standard info from prmon json
[2025-10-12 15:13:14] 2025-10-12 19:12:42,431 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:13:14] 2025-10-12 19:12:42,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:13:14] 2025-10-12 19:12:42,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:13:14] 2025-10-12 19:12:42,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:13:14] 2025-10-12 19:12:42,433 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:13:14] 2025-10-12 19:12:42,434 | INFO     | sum of square deviations: 93240818.0
[2025-10-12 15:13:14] 2025-10-12 19:12:42,434 | INFO     | sum of deviations: -539002710.0
[2025-10-12 15:13:14] 2025-10-12 19:12:42,434 | INFO     | mean x: 1760294210.0
[2025-10-12 15:13:14] 2025-10-12 19:12:42,434 | INFO     | mean y: 2680790.8358208956
[2025-10-12 15:13:14] 2025-10-12 19:12:42,434 | INFO     | -- intersect: 10178517617.871264
[2025-10-12 15:13:14] 2025-10-12 19:12:42,434 | INFO     | intersect: 10178517617.871264
[2025-10-12 15:13:14] 2025-10-12 19:12:42,435 | INFO     | chi2: 0.02490066270849709
[2025-10-12 15:13:14] 2025-10-12 19:12:42,435 | INFO     | -- intersect: 10178517617.871264
[2025-10-12 15:13:14] 2025-10-12 19:12:42,435 | INFO     | current memory leak: -5.78 B/s (using 67 data points, chi2=0.02)
[2025-10-12 15:13:14] 2025-10-12 19:12:42,435 | INFO     | could have reported an average CPU frequency of 2076 MHz (6 samples)
[2025-10-12 15:13:14] 2025-10-12 19:12:42,435 | INFO     | ..............................
[2025-10-12 15:13:14] 2025-10-12 19:12:42,436 | INFO     | . Timing measurements:
[2025-10-12 15:13:14] 2025-10-12 19:12:42,436 | INFO     | . get job = 0 s
[2025-10-12 15:13:14] 2025-10-12 19:12:42,436 | INFO     | . initial setup = 2 s
[2025-10-12 15:13:14] 2025-10-12 19:12:42,436 | INFO     | . payload setup = 7 s
[2025-10-12 15:13:14] 2025-10-12 19:12:42,436 | INFO     | . stage-in = 0 s
[2025-10-12 15:13:14] 2025-10-12 19:12:42,436 | INFO     | . payload execution = 4463 s
[2025-10-12 15:13:14] 2025-10-12 19:12:42,436 | INFO     | . stage-out = 0 s
[2025-10-12 15:13:14] 2025-10-12 19:12:42,436 | INFO     | . log creation = 0 s
[2025-10-12 15:13:14] 2025-10-12 19:12:42,436 | INFO     | ..............................
[2025-10-12 15:13:14] 2025-10-12 19:12:42,525 | INFO     | 
[2025-10-12 15:13:14] 2025-10-12 19:12:42,525 | INFO     | job summary report
[2025-10-12 15:13:14] 2025-10-12 19:12:42,525 | INFO     | --------------------------------------------------
[2025-10-12 15:13:14] 2025-10-12 19:12:42,525 | INFO     | PanDA job id: 6840390774
[2025-10-12 15:13:14] 2025-10-12 19:12:42,525 | INFO     | task id: 46676269
[2025-10-12 15:13:14] 2025-10-12 19:12:42,526 | INFO     | errors: (none)
[2025-10-12 15:13:14] 2025-10-12 19:12:42,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:13:14] 2025-10-12 19:12:42,526 | INFO     | pilot state: finished 
[2025-10-12 15:13:14] 2025-10-12 19:12:42,526 | INFO     | transexitcode: 0
[2025-10-12 15:13:14] 2025-10-12 19:12:42,526 | INFO     | exeerrorcode: 0
[2025-10-12 15:13:14] 2025-10-12 19:12:42,526 | INFO     | exeerrordiag: 
[2025-10-12 15:13:14] 2025-10-12 19:12:42,526 | INFO     | exitcode: 0
[2025-10-12 15:13:14] 2025-10-12 19:12:42,527 | INFO     | exitmsg: OK
[2025-10-12 15:13:14] 2025-10-12 19:12:42,527 | INFO     | cpuconsumptiontime: 48529 s
[2025-10-12 15:13:14] 2025-10-12 19:12:42,527 | INFO     | nevents: 400
[2025-10-12 15:13:14] 2025-10-12 19:12:42,527 | INFO     | neventsw: 0
[2025-10-12 15:13:14] 2025-10-12 19:12:42,527 | INFO     | pid: 21230
[2025-10-12 15:13:14] 2025-10-12 19:12:42,527 | INFO     | pgrp: 21230
[2025-10-12 15:13:14] 2025-10-12 19:12:42,528 | INFO     | corecount: 12
[2025-10-12 15:13:14] 2025-10-12 19:12:42,528 | INFO     | event service: False
[2025-10-12 15:13:14] 2025-10-12 19:12:42,528 | INFO     | sizes: {0: 2348029, 1: 2348885, 6: 2349147, 12: 2349175, 4475: 2375279, 4476: 2384277, 4478: 2384461, 4484: 2384655}
[2025-10-12 15:13:14] 2025-10-12 19:12:42,528 | INFO     | --------------------------------------------------
[2025-10-12 15:13:14] 2025-10-12 19:12:42,528 | INFO     | 
[2025-10-12 15:13:14] 2025-10-12 19:12:42,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:13:14] 2025-10-12 19:12:42,552 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,552 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,552 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,552 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,555 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:13:14] 2025-10-12 19:12:42,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,555 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:13:14] 2025-10-12 19:12:42,555 | INFO     | job 6840390774 has completed (purged errors)
[2025-10-12 15:13:14] 2025-10-12 19:12:42,556 | INFO     | overall cleanup function is called
[2025-10-12 15:13:14] 2025-10-12 19:12:43,564 | INFO     | --- collectZombieJob: --- 10, [21230]
[2025-10-12 15:13:14] 2025-10-12 19:12:43,564 | INFO     | zombie collector waiting for pid 21230
[2025-10-12 15:13:14] 2025-10-12 19:12:43,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:13:14] 2025-10-12 19:12:43,565 | INFO     | collected zombie processes
[2025-10-12 15:13:14] 2025-10-12 19:12:43,565 | INFO     | will attempt to kill all subprocesses of pid=21230
[2025-10-12 15:13:14] 2025-10-12 19:12:43,656 | INFO     | process IDs to be killed: [21230] (in reverse order)
[2025-10-12 15:13:14] 2025-10-12 19:12:43,708 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:13:14] 2025-10-12 19:12:43,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:13:14] 2025-10-12 19:12:43,712 | INFO     | did not find any defunct processes belonging to 21230
[2025-10-12 15:13:14] 2025-10-12 19:12:43,714 | INFO     | did not find any defunct processes belonging to 21230
[2025-10-12 15:13:14] 2025-10-12 19:12:43,715 | INFO     | ready for new job
[2025-10-12 15:13:14] 2025-10-12 19:12:43,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:13:14] 2025-10-12 19:12:43,717 | INFO     | ***************************************
[2025-10-12 15:13:14] 2025-10-12 19:12:43,717 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:13:14] 2025-10-12 19:12:43,717 | INFO     | ***************************************
[2025-10-12 15:13:14] 2025-10-12 19:12:43,717 | INFO     | 
[2025-10-12 15:13:14] 2025-10-12 19:12:43,718 | INFO     | architecture information:
[2025-10-12 15:13:14] 2025-10-12 19:12:43,719 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:13:14] 2025-10-12 19:12:43,734 | INFO     | cat /etc/os-release:
[2025-10-12 15:13:14] NAME="CentOS Linux"
[2025-10-12 15:13:14] VERSION="7 (Core)"
[2025-10-12 15:13:14] ID="centos"
[2025-10-12 15:13:14] ID_LIKE="rhel fedora"
[2025-10-12 15:13:14] VERSION_ID="7"
[2025-10-12 15:13:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:13:14] ANSI_COLOR="0;31"
[2025-10-12 15:13:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:13:14] HOME_URL="https://www.centos.org/"
[2025-10-12 15:13:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:13:14] 
[2025-10-12 15:13:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:13:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:13:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:13:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:13:14] 
[2025-10-12 15:13:14] 2025-10-12 19:12:43,734 | INFO     | ***************************************
[2025-10-12 15:13:14] 2025-10-12 19:12:44,238 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:13:14] 2025-10-12 19:12:44,254 | INFO     | sufficient remaining disk space (29435625472 B)
[2025-10-12 15:13:14] 2025-10-12 19:12:44,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:13:14] 2025-10-12 19:12:44,255 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:13:14] 2025-10-12 19:12:44,255 | INFO     | update_server=False
[2025-10-12 15:13:14] 2025-10-12 19:12:44,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:13:14] 2025-10-12 19:12:44,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:13:14] 2025-10-12 19:12:44,301 | INFO     | all job control threads have been joined
[2025-10-12 15:13:14] 2025-10-12 19:12:44,438 | INFO     | all payload control threads have been joined
[2025-10-12 15:13:14] 2025-10-12 19:12:44,526 | INFO     | all data control threads have been joined
[2025-10-12 15:13:14] 2025-10-12 19:12:44,528 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 15:13:14] 2025-10-12 19:12:44,528 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 15:13:14] 2025-10-12 19:12:44,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:13:14] 2025-10-12 19:12:44,529 | INFO     | will abort loop
[2025-10-12 15:13:14] 2025-10-12 19:12:45,257 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:45,261 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:45,306 | INFO     | [job] control thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:45,443 | INFO     | [payload] control thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:45,531 | INFO     | [data] control thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:45,534 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:45,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:13:14] 2025-10-12 19:12:45,577 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:45,771 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:46,105 | INFO     | [job] validate thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:46,233 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:46,394 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:46,592 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:46,735 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:47,546 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:47,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:13:14] 2025-10-12 19:12:49,712 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:13:14] 2025-10-12 19:12:51,731 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:54,483 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:13:14] 2025-10-12 19:12:55,488 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:13:14] 2025-10-12 19:12:55,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140609086977856)>', '<ExcThread(monitor, started 140608790304512)>']
[2025-10-12 15:13:14] 2025-10-12 19:13:00,562 | INFO     | all workflow threads have been joined
[2025-10-12 15:13:14] 2025-10-12 19:13:00,562 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:13:14] 2025-10-12 19:13:00,562 | INFO     | traces error code: 0
[2025-10-12 15:13:14] 2025-10-12 19:13:00,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:13:14] 2025-10-12 19:13:14,079 | INFO     | PID=14817 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:13:14] 2025-10-12 19:13:14,079 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:13:14] 2025-10-12 19:13:14,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:13:14] 2025-10-12 19:13:14,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:13:14] 2025-10-12 19:13:14,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:13:14] 2025-10-12 19:13:14,080 | INFO     | [monitor] control thread has ended
[2025-10-12 15:13:14] 2025-10-12 19:13:14,179 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:13:14] 2025-10-12 19:13:14,183 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:13:14] 2025-10-12 19:13:14,187 [wrapper] pilotpid: 14817
[2025-10-12 15:13:14] 2025-10-12 19:13:14,190 [wrapper] Pilot exit status: 0
[2025-10-12 15:13:14] 2025-10-12 19:13:14,207 [wrapper] pandaids: 6840390774
[2025-10-12 15:13:14] 2025-10-12 19:13:14,248 [wrapper] cleanup supervisor_pilot 14254 14818
[2025-10-12 15:13:14] 2025-10-12 19:13:14,252 [wrapper] Test setup, not cleaning
[2025-10-12 15:13:14] 2025-10-12 19:13:14,256 [wrapper] apfmon messages muted
[2025-10-12 15:13:14] 2025-10-12 19:13:14,260 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:13:14] 2025-10-12 19:13:14,264 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:13:14]  *** Error codes and diagnostics ***
[2025-10-12 15:13:14]     "exeErrorCode": 0,
[2025-10-12 15:13:14]     "exeErrorDiag": "",
[2025-10-12 15:13:14]     "pilotErrorCode": 0,
[2025-10-12 15:13:14]     "pilotErrorDiag": "",
[2025-10-12 15:13:14]  *** Listing of results directory ***
[2025-10-12 15:13:14] total 411172
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 15:13:14] -rwx------ 1 boincer umatlas     36292 Oct 12 12:34 runpilot2-wrapper.sh
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:34 queuedata.json
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:13:14] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:57 run_atlas
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:57 job.xml
[2025-10-12 15:13:14] -rw-r--r-- 2 boincer umatlas 219715365 Oct 12 13:57 EVNT.46676267._004744.pool.root.1
[2025-10-12 15:13:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:57 start_atlas.sh
[2025-10-12 15:13:14] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:57 shared
[2025-10-12 15:13:14] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 13:57 input.tar.gz
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:57 boinc_lockfile
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:57 pandaJob.out
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas    975528 Oct 12 13:57 agis_schedconf.cvmfs.json
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas   1560580 Oct 12 13:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:13:14] drwx------ 5 boincer umatlas      4096 Oct 12 13:57 pilot3
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas 195350615 Oct 12 15:12 HITS.46676269._083546.pool.root.1
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 15:12 init_data.xml
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas       529 Oct 12 15:12 boinc_task_state.xml
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas      1048 Oct 12 15:12 memory_monitor_summary.json
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas    382140 Oct 12 15:12 log.46676269._083546.job.log.tgz.1
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:12 boinc_mmap_file
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas        27 Oct 12 15:12 wrapper_checkpoint.txt
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas        95 Oct 12 15:12 pilot_heartbeat.json
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas      7853 Oct 12 15:12 heartbeat.json
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas       745 Oct 12 15:13 pilotlog.txt
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas    651876 Oct 12 15:13 log.46676269._083546.job.log.1
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas       357 Oct 12 15:13 output.list
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:13 runtime_log
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas   1054720 Oct 12 15:13 result.tar.gz
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 15:13 runtime_log.err
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas       658 Oct 12 15:13 RQnNDmRCES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIfkNDm8o75Pm.diag
[2025-10-12 15:13:14] -rw-r--r-- 1 boincer umatlas     21959 Oct 12 15:13 stderr.txt
[2025-10-12 15:13:14] HITS file was successfully produced:
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas 195350615 Oct 12 15:12 shared/HITS.pool.root.1
[2025-10-12 15:13:14]  *** Contents of shared directory: ***
[2025-10-12 15:13:14] total 406956
[2025-10-12 15:13:14] -rw-r--r-- 2 boincer umatlas 219715365 Oct 12 13:57 ATLAS.root_0
[2025-10-12 15:13:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:57 start_atlas.sh
[2025-10-12 15:13:14] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 13:57 input.tar.gz
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas 195350615 Oct 12 15:12 HITS.pool.root.1
[2025-10-12 15:13:14] -rw------- 1 boincer umatlas   1054720 Oct 12 15:13 result.tar.gz
15:13:15 (11143): run_atlas exited; CPU time 48503.858953
15:13:15 (11143): called boinc_finish(0)

</stderr_txt>
]]>

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