Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:58:02 (21537): wrapper (7.7.26015): starting
13:58:02 (21537): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:58:02] Arguments: --nthreads 8
[2025-10-12 13:58:02] Threads: 8
[2025-10-12 13:58:02] Checking for CVMFS
[2025-10-12 13:58:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:58:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:58:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:58:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:58:03] 2.11.2.0 2866 8828 71460 151630 3 57 14814585 20275201 1 130560 0 5425522 99.989 293358 36455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:58:03] CVMFS is ok
[2025-10-12 13:58:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:58:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:58:03] Further information can be found at the LHC@home message board.
[2025-10-12 13:58:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:58:03] Checking for apptainer binary...
[2025-10-12 13:58:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:58:03] Running /usr/bin/apptainer --version
[2025-10-12 13:58:03] apptainer version 1.3.2-1.el7
[2025-10-12 13:58:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:58:04] c-204-35.aglt2.org
[2025-10-12 13:58:04] apptainer works
[2025-10-12 13:58:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:58:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:58:05] Starting ATLAS job with PandaID=6840182010
[2025-10-12 13:58:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:59:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:59:40] 2025-10-12 19:58:58,876 | INFO     | -- intersect: -68333934418.91201
[2025-10-12 15:59:40] 2025-10-12 19:58:58,876 | INFO     | intersect: -68333934418.91201
[2025-10-12 15:59:40] 2025-10-12 19:58:58,876 | INFO     | chi2: 1.3467620336891952
[2025-10-12 15:59:40] 2025-10-12 19:58:58,876 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,877 | INFO     | sum of deviations: 18678632856.000004
[2025-10-12 15:59:40] 2025-10-12 19:58:58,877 | INFO     | mean x: 1760295349.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,877 | INFO     | mean y: 2481546.2477876106
[2025-10-12 15:59:40] 2025-10-12 19:58:58,877 | INFO     | -- intersect: -73491349358.75618
[2025-10-12 15:59:40] 2025-10-12 19:58:58,878 | INFO     | intersect: -73491349358.75618
[2025-10-12 15:59:40] 2025-10-12 19:58:58,878 | INFO     | chi2: 1.3483472317974872
[2025-10-12 15:59:40] 2025-10-12 19:58:58,878 | INFO     | current chi2=1.3483472317974872 (change=-0.11770439533030166 %)
[2025-10-12 15:59:40] 2025-10-12 19:58:58,878 | INFO     | right removable region: 112
[2025-10-12 15:59:40] 2025-10-12 19:58:58,878 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,879 | INFO     | sum of deviations: 3260521065.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,879 | INFO     | mean x: 1760295654.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,879 | INFO     | mean y: 2523983.318584071
[2025-10-12 15:59:40] 2025-10-12 19:58:58,879 | INFO     | -- intersect: -12826478394.970945
[2025-10-12 15:59:40] 2025-10-12 19:58:58,879 | INFO     | intersect: -12826478394.970945
[2025-10-12 15:59:40] 2025-10-12 19:58:58,880 | INFO     | chi2: 0.009883688156366682
[2025-10-12 15:59:40] 2025-10-12 19:58:58,880 | INFO     | current chi2=0.009883688156366682 (change=99.26611473228925 %)
[2025-10-12 15:59:40] 2025-10-12 19:58:58,880 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,881 | INFO     | sum of deviations: 2918379476.5
[2025-10-12 15:59:40] 2025-10-12 19:58:58,881 | INFO     | mean x: 1760295806.5
[2025-10-12 15:59:40] 2025-10-12 19:58:58,881 | INFO     | mean y: 2524937.4166666665
[2025-10-12 15:59:40] 2025-10-12 19:58:58,881 | INFO     | -- intersect: -13150176496.979742
[2025-10-12 15:59:40] 2025-10-12 19:58:58,881 | INFO     | intersect: -13150176496.979742
[2025-10-12 15:59:40] 2025-10-12 19:58:58,881 | INFO     | chi2: 0.00044254348136779637
[2025-10-12 15:59:40] 2025-10-12 19:58:58,881 | INFO     | current chi2=0.00044254348136779637 (change=95.52248640015289 %)
[2025-10-12 15:59:40] 2025-10-12 19:58:58,882 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,882 | INFO     | sum of deviations: 2269926144.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,882 | INFO     | mean x: 1760295959.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,882 | INFO     | mean y: 2526837.3883495145
[2025-10-12 15:59:40] 2025-10-12 19:58:58,883 | INFO     | -- intersect: -11791123816.191687
[2025-10-12 15:59:40] 2025-10-12 19:58:58,883 | INFO     | intersect: -11791123816.191687
[2025-10-12 15:59:40] 2025-10-12 19:58:58,883 | INFO     | chi2: 0.00014929549756710373
[2025-10-12 15:59:40] 2025-10-12 19:58:58,883 | INFO     | current chi2=0.00014929549756710373 (change=66.26421948287049 %)
[2025-10-12 15:59:40] 2025-10-12 19:58:58,883 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 15:59:40] 2025-10-12 19:58:58,884 | INFO     | sum of deviations: 1957608675.500001
[2025-10-12 15:59:40] 2025-10-12 19:58:58,884 | INFO     | mean x: 1760296111.5
[2025-10-12 15:59:40] 2025-10-12 19:58:58,884 | INFO     | mean y: 2527849.5204081633
[2025-10-12 15:59:40] 2025-10-12 19:58:58,884 | INFO     | -- intersect: -11806120287.289454
[2025-10-12 15:59:40] 2025-10-12 19:58:58,884 | INFO     | intersect: -11806120287.289454
[2025-10-12 15:59:40] 2025-10-12 19:58:58,885 | INFO     | chi2: 0.00014818002453955296
[2025-10-12 15:59:40] 2025-10-12 19:58:58,885 | INFO     | current chi2=0.00014818002453955296 (change=0.7471578485140841 %)
[2025-10-12 15:59:40] 2025-10-12 19:58:58,885 | INFO     | left removable region: 40
[2025-10-12 15:59:40] 2025-10-12 19:58:58,885 | INFO     | sum of square deviations: 115715658.0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,885 | INFO     | sum of deviations: 829186816.5000002
[2025-10-12 15:59:40] 2025-10-12 19:58:58,885 | INFO     | mean x: 1760296538.5
[2025-10-12 15:59:40] 2025-10-12 19:58:58,886 | INFO     | mean y: 2530659.7916666665
[2025-10-12 15:59:40] 2025-10-12 19:58:58,886 | INFO     | -- intersect: -12611273799.19335
[2025-10-12 15:59:40] 2025-10-12 19:58:58,886 | INFO     | intersect: -12611273799.19335
[2025-10-12 15:59:40] 2025-10-12 19:58:58,886 | INFO     | chi2: 0.00012191085956266557
[2025-10-12 15:59:40] 2025-10-12 19:58:58,886 | INFO     | -- intersect: -12611273799.19335
[2025-10-12 15:59:40] 2025-10-12 19:58:58,886 | INFO     | current memory leak: 7.17 B/s (using 72 data points, chi2=0.00)
[2025-10-12 15:59:40] 2025-10-12 19:58:58,887 | INFO     | could have reported an average CPU frequency of 1943 MHz (7 samples)
[2025-10-12 15:59:40] 2025-10-12 19:58:58,887 | INFO     | ..............................
[2025-10-12 15:59:40] 2025-10-12 19:58:58,887 | INFO     | . Timing measurements:
[2025-10-12 15:59:40] 2025-10-12 19:58:58,887 | INFO     | . get job = 0 s
[2025-10-12 15:59:40] 2025-10-12 19:58:58,887 | INFO     | . initial setup = 2 s
[2025-10-12 15:59:40] 2025-10-12 19:58:58,887 | INFO     | . payload setup = 8 s
[2025-10-12 15:59:40] 2025-10-12 19:58:58,888 | INFO     | . stage-in = 0 s
[2025-10-12 15:59:40] 2025-10-12 19:58:58,888 | INFO     | . payload execution = 7198 s
[2025-10-12 15:59:40] 2025-10-12 19:58:58,888 | INFO     | . stage-out = 0 s
[2025-10-12 15:59:40] 2025-10-12 19:58:58,888 | INFO     | . log creation = 0 s
[2025-10-12 15:59:40] 2025-10-12 19:58:58,888 | INFO     | ..............................
[2025-10-12 15:59:40] 2025-10-12 19:58:58,996 | INFO     | 
[2025-10-12 15:59:40] 2025-10-12 19:58:58,996 | INFO     | job summary report
[2025-10-12 15:59:40] 2025-10-12 19:58:58,996 | INFO     | --------------------------------------------------
[2025-10-12 15:59:40] 2025-10-12 19:58:58,997 | INFO     | PanDA job id: 6840182010
[2025-10-12 15:59:40] 2025-10-12 19:58:58,997 | INFO     | task id: 46676269
[2025-10-12 15:59:40] 2025-10-12 19:58:58,997 | INFO     | errors: (none)
[2025-10-12 15:59:40] 2025-10-12 19:58:58,997 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:59:40] 2025-10-12 19:58:58,997 | INFO     | pilot state: finished 
[2025-10-12 15:59:40] 2025-10-12 19:58:58,998 | INFO     | transexitcode: 0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,998 | INFO     | exeerrorcode: 0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,998 | INFO     | exeerrordiag: 
[2025-10-12 15:59:40] 2025-10-12 19:58:58,998 | INFO     | exitcode: 0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,998 | INFO     | exitmsg: OK
[2025-10-12 15:59:40] 2025-10-12 19:58:58,998 | INFO     | cpuconsumptiontime: 54197 s
[2025-10-12 15:59:40] 2025-10-12 19:58:58,999 | INFO     | nevents: 400
[2025-10-12 15:59:40] 2025-10-12 19:58:58,999 | INFO     | neventsw: 0
[2025-10-12 15:59:40] 2025-10-12 19:58:58,999 | INFO     | pid: 31561
[2025-10-12 15:59:40] 2025-10-12 19:58:58,999 | INFO     | pgrp: 31561
[2025-10-12 15:59:40] 2025-10-12 19:58:58,999 | INFO     | corecount: 8
[2025-10-12 15:59:40] 2025-10-12 19:58:58,999 | INFO     | event service: False
[2025-10-12 15:59:40] 2025-10-12 19:58:59,000 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7211: 2376429, 7212: 2385483, 7220: 2385621}
[2025-10-12 15:59:40] 2025-10-12 19:58:59,000 | INFO     | --------------------------------------------------
[2025-10-12 15:59:40] 2025-10-12 19:58:59,000 | INFO     | 
[2025-10-12 15:59:40] 2025-10-12 19:58:59,000 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:59:40] 2025-10-12 19:58:59,029 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,030 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,030 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,032 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,032 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,032 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:59:40] 2025-10-12 19:58:59,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,033 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:59:40] 2025-10-12 19:58:59,033 | INFO     | job 6840182010 has completed (purged errors)
[2025-10-12 15:59:40] 2025-10-12 19:58:59,033 | INFO     | overall cleanup function is called
[2025-10-12 15:59:40] 2025-10-12 19:59:00,041 | INFO     | --- collectZombieJob: --- 10, [31561]
[2025-10-12 15:59:40] 2025-10-12 19:59:00,041 | INFO     | zombie collector waiting for pid 31561
[2025-10-12 15:59:40] 2025-10-12 19:59:00,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:59:40] 2025-10-12 19:59:00,049 | INFO     | collected zombie processes
[2025-10-12 15:59:40] 2025-10-12 19:59:00,049 | INFO     | will attempt to kill all subprocesses of pid=31561
[2025-10-12 15:59:40] 2025-10-12 19:59:00,137 | INFO     | process IDs to be killed: [31561] (in reverse order)
[2025-10-12 15:59:40] 2025-10-12 19:59:00,200 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:59:40] 2025-10-12 19:59:00,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:59:40] 2025-10-12 19:59:00,203 | INFO     | did not find any defunct processes belonging to 31561
[2025-10-12 15:59:40] 2025-10-12 19:59:00,206 | INFO     | did not find any defunct processes belonging to 31561
[2025-10-12 15:59:40] 2025-10-12 19:59:00,206 | INFO     | ready for new job
[2025-10-12 15:59:40] 2025-10-12 19:59:00,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:59:40] 2025-10-12 19:59:00,208 | INFO     | ***************************************
[2025-10-12 15:59:40] 2025-10-12 19:59:00,208 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:59:40] 2025-10-12 19:59:00,208 | INFO     | ***************************************
[2025-10-12 15:59:40] 2025-10-12 19:59:00,208 | INFO     | 
[2025-10-12 15:59:40] 2025-10-12 19:59:00,209 | INFO     | architecture information:
[2025-10-12 15:59:40] 2025-10-12 19:59:00,209 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:59:40] 2025-10-12 19:59:00,231 | INFO     | cat /etc/os-release:
[2025-10-12 15:59:40] NAME="CentOS Linux"
[2025-10-12 15:59:40] VERSION="7 (Core)"
[2025-10-12 15:59:40] ID="centos"
[2025-10-12 15:59:40] ID_LIKE="rhel fedora"
[2025-10-12 15:59:40] VERSION_ID="7"
[2025-10-12 15:59:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:59:40] ANSI_COLOR="0;31"
[2025-10-12 15:59:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:59:40] HOME_URL="https://www.centos.org/"
[2025-10-12 15:59:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:59:40] 
[2025-10-12 15:59:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:59:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:59:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:59:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:59:40] 
[2025-10-12 15:59:40] 2025-10-12 19:59:00,231 | INFO     | ***************************************
[2025-10-12 15:59:40] 2025-10-12 19:59:00,734 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:59:40] 2025-10-12 19:59:00,757 | INFO     | sufficient remaining disk space (18553503744 B)
[2025-10-12 15:59:40] 2025-10-12 19:59:00,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:59:40] 2025-10-12 19:59:00,758 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:59:40] 2025-10-12 19:59:00,758 | INFO     | update_server=False
[2025-10-12 15:59:40] 2025-10-12 19:59:00,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:59:40] 2025-10-12 19:59:00,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:59:40] 2025-10-12 19:59:00,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:59:40] 2025-10-12 19:59:00,760 | INFO     | aborting loop
[2025-10-12 15:59:40] 2025-10-12 19:59:00,795 | INFO     | all payload control threads have been joined
[2025-10-12 15:59:40] 2025-10-12 19:59:00,827 | INFO     | all data control threads have been joined
[2025-10-12 15:59:40] 2025-10-12 19:59:01,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:59:40] 2025-10-12 19:59:01,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:59:40] 2025-10-12 19:59:01,763 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:01,764 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:01,765 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:01,799 | INFO     | [payload] control thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:01,832 | INFO     | [data] control thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:01,901 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:01,938 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:01,997 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:02,018 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:02,292 | INFO     | [job] validate thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:02,442 | INFO     | all job control threads have been joined
[2025-10-12 15:59:40] 2025-10-12 19:59:02,706 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:02,823 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:03,249 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:03,447 | INFO     | [job] control thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:05,330 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:11,072 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:59:40] 2025-10-12 19:59:12,077 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:59:40] 2025-10-12 19:59:31,617 | INFO     | PID=25208 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:59:40] 2025-10-12 19:59:31,618 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:59:40] 2025-10-12 19:59:31,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:59:40] 2025-10-12 19:59:31,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:59:40] 2025-10-12 19:59:33,729 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:59:40] 2025-10-12 19:59:34,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182756034368)>', '<ExcThread(monitor, started 140182003107584)>']
[2025-10-12 15:59:40] 2025-10-12 19:59:35,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:59:40] 2025-10-12 19:59:35,639 | INFO     | [monitor] control thread has ended
[2025-10-12 15:59:40] 2025-10-12 19:59:39,760 | INFO     | all workflow threads have been joined
[2025-10-12 15:59:40] 2025-10-12 19:59:39,760 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:59:40] 2025-10-12 19:59:39,761 | INFO     | traces error code: 0
[2025-10-12 15:59:40] 2025-10-12 19:59:39,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:59:40] 2025-10-12 19:59:39,873 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:59:40] 2025-10-12 19:59:39,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:59:40] 2025-10-12 19:59:39,883 [wrapper] pilotpid: 25208
[2025-10-12 15:59:40] 2025-10-12 19:59:39,888 [wrapper] Pilot exit status: 0
[2025-10-12 15:59:40] 2025-10-12 19:59:39,907 [wrapper] pandaids: 6840182010
[2025-10-12 15:59:40] 2025-10-12 19:59:39,951 [wrapper] cleanup supervisor_pilot 22853 25209
[2025-10-12 15:59:40] 2025-10-12 19:59:39,956 [wrapper] Test setup, not cleaning
[2025-10-12 15:59:40] 2025-10-12 19:59:39,961 [wrapper] apfmon messages muted
[2025-10-12 15:59:40] 2025-10-12 19:59:39,966 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:59:40] 2025-10-12 19:59:39,970 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:59:40]  *** Error codes and diagnostics ***
[2025-10-12 15:59:40]     "exeErrorCode": 0,
[2025-10-12 15:59:40]     "exeErrorDiag": "",
[2025-10-12 15:59:40]     "pilotErrorCode": 0,
[2025-10-12 15:59:40]     "pilotErrorDiag": "",
[2025-10-12 15:59:40]  *** Listing of results directory ***
[2025-10-12 15:59:40] total 414032
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 10:34 queuedata.json
[2025-10-12 15:59:40] -rwx------ 1 boincer umatlas     36292 Oct 12 10:34 runpilot2-wrapper.sh
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:59:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:58 run_atlas
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:58 job.xml
[2025-10-12 15:59:40] -rw-r--r-- 2 boincer umatlas 221103769 Oct 12 13:58 EVNT.46676267._004247.pool.root.1
[2025-10-12 15:59:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:58 start_atlas.sh
[2025-10-12 15:59:40] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:58 shared
[2025-10-12 15:59:40] -rw-r--r-- 2 boincer umatlas    569687 Oct 12 13:58 input.tar.gz
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:58 boinc_lockfile
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:58 pandaJob.out
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas    975528 Oct 12 13:58 agis_schedconf.cvmfs.json
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas   1560580 Oct 12 13:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:59:40] drwx------ 5 boincer umatlas      4096 Oct 12 13:58 pilot3
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 15:57 init_data.xml
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas 196213850 Oct 12 15:58 HITS.46676269._080870.pool.root.1
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas       529 Oct 12 15:58 boinc_task_state.xml
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas      1049 Oct 12 15:58 memory_monitor_summary.json
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas    358893 Oct 12 15:58 log.46676269._080870.job.log.tgz.1
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas      7844 Oct 12 15:58 heartbeat.json
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:59 boinc_mmap_file
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas        27 Oct 12 15:59 wrapper_checkpoint.txt
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas        95 Oct 12 15:59 pilot_heartbeat.json
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas      4818 Oct 12 15:59 pilotlog.txt
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas   1019274 Oct 12 15:59 log.46676269._080870.job.log.1
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas       357 Oct 12 15:59 output.list
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:59 runtime_log
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas   1392640 Oct 12 15:59 result.tar.gz
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 15:59 runtime_log.err
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas       659 Oct 12 15:59 7tQKDmlKCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmd7TMDmw4rIWm.diag
[2025-10-12 15:59:40] -rw-r--r-- 1 boincer umatlas     20860 Oct 12 15:59 stderr.txt
[2025-10-12 15:59:40] HITS file was successfully produced:
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas 196213850 Oct 12 15:58 shared/HITS.pool.root.1
[2025-10-12 15:59:40]  *** Contents of shared directory: ***
[2025-10-12 15:59:40] total 409480
[2025-10-12 15:59:40] -rw-r--r-- 2 boincer umatlas 221103769 Oct 12 13:58 ATLAS.root_0
[2025-10-12 15:59:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:58 start_atlas.sh
[2025-10-12 15:59:40] -rw-r--r-- 2 boincer umatlas    569687 Oct 12 13:58 input.tar.gz
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas 196213850 Oct 12 15:58 HITS.pool.root.1
[2025-10-12 15:59:40] -rw------- 1 boincer umatlas   1392640 Oct 12 15:59 result.tar.gz
15:59:41 (21537): run_atlas exited; CPU time 54219.649501
15:59:41 (21537): called boinc_finish(0)

</stderr_txt>
]]>

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