Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:03:27 (1912228): wrapper (7.7.26015): starting
14:03:27 (1912228): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:03:27] Arguments: --nthreads 8
[2025-10-12 14:03:27] Threads: 8
[2025-10-12 14:03:27] Checking for CVMFS
[2025-10-12 14:03:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:03:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:03:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:03:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:03:30] 2.13.2.0 3657063 129579 454884 151630 2 208 32427349 32935937 27120 16776704 0 187911320 99.584 216091567 30632 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 14:03:30] CVMFS is ok
[2025-10-12 14:03:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:03:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:03:30] Further information can be found at the LHC@home message board.
[2025-10-12 14:03:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:03:30] Checking for apptainer binary...
[2025-10-12 14:03:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:03:30] Running /usr/bin/apptainer --version
[2025-10-12 14:03:30] apptainer version 1.4.3-1.el9
[2025-10-12 14:03:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:03:32] c6-6-39-4.aglt2.org
[2025-10-12 14:03:32] apptainer works
[2025-10-12 14:03:32] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:03:32] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:03:32] Starting ATLAS job with PandaID=6839988432
[2025-10-12 14:03:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:15:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:15:26] 2025-10-13 01:14:30,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:15:26] 2025-10-13 01:14:30,745 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 21:15:26] 2025-10-13 01:14:30,749 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2809.4344642857136
[2025-10-12 21:15:26] 2025-10-13 01:14:30,815 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6839988432/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:15:26] 2025-10-13 01:14:30,816 | INFO     | extracted standard info from prmon json
[2025-10-12 21:15:26] 2025-10-13 01:14:30,816 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:15:26] 2025-10-13 01:14:30,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:15:26] 2025-10-13 01:14:30,816 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:15:26] 2025-10-13 01:14:30,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:15:26] 2025-10-13 01:14:30,823 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:15:26] 2025-10-13 01:14:30,824 | INFO     | sum of square deviations: 22808719338.10971
[2025-10-12 21:15:26] 2025-10-13 01:14:30,828 | INFO     | sum of deviations: 15466111709.176594
[2025-10-12 21:15:26] 2025-10-13 01:14:30,829 | INFO     | mean x: 1760305236.300716
[2025-10-12 21:15:26] 2025-10-13 01:14:30,829 | INFO     | mean y: 2079976.7446300716
[2025-10-12 21:15:26] 2025-10-13 01:14:30,829 | INFO     | -- intersect: -1191545891.6480174
[2025-10-12 21:15:26] 2025-10-13 01:14:30,829 | INFO     | intersect: -1191545891.6480174
[2025-10-12 21:15:26] 2025-10-13 01:14:30,829 | INFO     | chi2: 4.510850944743365
[2025-10-12 21:15:26] 2025-10-13 01:14:30,830 | INFO     | sum of square deviations: 22001886825.152153
[2025-10-12 21:15:26] 2025-10-13 01:14:30,834 | INFO     | sum of deviations: 60735348314.978195
[2025-10-12 21:15:26] 2025-10-13 01:14:30,835 | INFO     | mean x: 1760305083.8043478
[2025-10-12 21:15:26] 2025-10-13 01:14:30,835 | INFO     | mean y: 2088511.234299517
[2025-10-12 21:15:26] 2025-10-13 01:14:30,835 | INFO     | -- intersect: -4857164845.312525
[2025-10-12 21:15:26] 2025-10-13 01:14:30,835 | INFO     | intersect: -4857164845.312525
[2025-10-12 21:15:26] 2025-10-13 01:14:30,835 | INFO     | chi2: 3.6115651642215973
[2025-10-12 21:15:26] 2025-10-13 01:14:30,836 | INFO     | current chi2=3.6115651642215973 (change=19.93605622393117 %)
[2025-10-12 21:15:26] 2025-10-13 01:14:30,836 | INFO     | right removable region: 413
[2025-10-12 21:15:26] 2025-10-13 01:14:30,836 | INFO     | sum of square deviations: 22001809965.15216
[2025-10-12 21:15:26] 2025-10-13 01:14:30,840 | INFO     | sum of deviations: -71275758992.1304
[2025-10-12 21:15:26] 2025-10-13 01:14:30,840 | INFO     | mean x: 1760305388.8043478
[2025-10-12 21:15:26] 2025-10-13 01:14:30,841 | INFO     | mean y: 2096333.6280193236
[2025-10-12 21:15:26] 2025-10-13 01:14:30,841 | INFO     | -- intersect: 5704677295.998375
[2025-10-12 21:15:26] 2025-10-13 01:14:30,841 | INFO     | intersect: 5704677295.998375
[2025-10-12 21:15:26] 2025-10-13 01:14:30,841 | INFO     | chi2: 2.016444165004877
[2025-10-12 21:15:26] 2025-10-13 01:14:30,841 | INFO     | current chi2=2.016444165004877 (change=55.29792073145971 %)
[2025-10-12 21:15:26] 2025-10-13 01:14:30,842 | INFO     | sum of square deviations: 21214182264.797222
[2025-10-12 21:15:26] 2025-10-13 01:14:30,846 | INFO     | sum of deviations: -100822233317.51097
[2025-10-12 21:15:26] 2025-10-13 01:14:30,846 | INFO     | mean x: 1760305541.3056235
[2025-10-12 21:15:26] 2025-10-13 01:14:30,846 | INFO     | mean y: 2102055.3960880195
[2025-10-12 21:15:26] 2025-10-13 01:14:30,846 | INFO     | -- intersect: 8368106164.360948
[2025-10-12 21:15:26] 2025-10-13 01:14:30,846 | INFO     | intersect: 8368106164.360948
[2025-10-12 21:15:26] 2025-10-13 01:14:30,847 | INFO     | chi2: 1.7162320085886125
[2025-10-12 21:15:26] 2025-10-13 01:14:30,847 | INFO     | current chi2=1.7162320085886125 (change=14.888195846252883 %)
[2025-10-12 21:15:26] 2025-10-13 01:14:30,847 | INFO     | left removable region: 20
[2025-10-12 21:15:26] 2025-10-13 01:14:30,848 | INFO     | sum of square deviations: 18820648764.569874
[2025-10-12 21:15:26] 2025-10-13 01:14:30,852 | INFO     | sum of deviations: -64150948399.867714
[2025-10-12 21:15:26] 2025-10-13 01:14:30,852 | INFO     | mean x: 1760305663.3002543
[2025-10-12 21:15:26] 2025-10-13 01:14:30,852 | INFO     | mean y: 2115220.6768447836
[2025-10-12 21:15:26] 2025-10-13 01:14:30,852 | INFO     | -- intersect: 6002188819.996805
[2025-10-12 21:15:26] 2025-10-13 01:14:30,852 | INFO     | intersect: 6002188819.996805
[2025-10-12 21:15:26] 2025-10-13 01:14:30,853 | INFO     | chi2: 0.661329696190239
[2025-10-12 21:15:26] 2025-10-13 01:14:30,853 | INFO     | -- intersect: 6002188819.996805
[2025-10-12 21:15:26] 2025-10-13 01:14:30,853 | INFO     | current memory leak: -3.41 B/s (using 393 data points, chi2=0.66)
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | could have reported an average CPU frequency of 2852 MHz (17 samples)
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | ..............................
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | . Timing measurements:
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | . get job = 0 s
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | . initial setup = 6 s
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | . payload setup = 57 s
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | . stage-in = 0 s
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | . payload execution = 25584 s
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | . stage-out = 5 s
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | . log creation = 0 s
[2025-10-12 21:15:26] 2025-10-13 01:14:30,854 | INFO     | ..............................
[2025-10-12 21:15:26] 2025-10-13 01:14:31,073 | INFO     | time since job start (25776s) is within the limit (172800.0s)
[2025-10-12 21:15:26] 2025-10-13 01:14:31,364 | INFO     | 
[2025-10-12 21:15:26] 2025-10-13 01:14:31,364 | INFO     | job summary report
[2025-10-12 21:15:26] 2025-10-13 01:14:31,364 | INFO     | --------------------------------------------------
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | PanDA job id: 6839988432
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | task id: 46676269
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | errors: (none)
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | pilot state: finished 
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | transexitcode: 0
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | exeerrorcode: 0
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | exeerrordiag: 
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | exitcode: 0
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | exitmsg: OK
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | cpuconsumptiontime: 40143 s
[2025-10-12 21:15:26] 2025-10-13 01:14:31,365 | INFO     | nevents: 400
[2025-10-12 21:15:26] 2025-10-13 01:14:31,367 | INFO     | neventsw: 0
[2025-10-12 21:15:26] 2025-10-13 01:14:31,367 | INFO     | pid: 1941705
[2025-10-12 21:15:26] 2025-10-13 01:14:31,367 | INFO     | pgrp: 1941705
[2025-10-12 21:15:26] 2025-10-13 01:14:31,367 | INFO     | corecount: 8
[2025-10-12 21:15:26] 2025-10-13 01:14:31,367 | INFO     | event service: False
[2025-10-12 21:15:26] 2025-10-13 01:14:31,367 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348885, 3: 2348913, 14: 2348941, 26: 2348969, 37: 2349125, 44: 2349415, 49: 2349443, 25646: 2385234, 25652: 2394232, 25653: 239
[2025-10-12 21:15:26] 2025-10-13 01:14:31,367 | INFO     | --------------------------------------------------
[2025-10-12 21:15:26] 2025-10-13 01:14:31,367 | INFO     | 
[2025-10-12 21:15:26] 2025-10-13 01:14:31,367 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 21:15:26] 2025-10-13 01:14:31,505 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,507 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:15:26] 2025-10-13 01:14:31,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:15:26] 2025-10-13 01:14:31,507 | INFO     | job 6839988432 has completed (purged errors)
[2025-10-12 21:15:26] 2025-10-13 01:14:31,508 | INFO     | overall cleanup function is called
[2025-10-12 21:15:26] 2025-10-13 01:14:32,573 | INFO     | --- collectZombieJob: --- 10, [1941705]
[2025-10-12 21:15:26] 2025-10-13 01:14:32,573 | INFO     | zombie collector waiting for pid 1941705
[2025-10-12 21:15:26] 2025-10-13 01:14:32,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:15:26] 2025-10-13 01:14:32,574 | INFO     | collected zombie processes
[2025-10-12 21:15:26] 2025-10-13 01:14:32,574 | INFO     | will attempt to kill all subprocesses of pid=1941705
[2025-10-12 21:15:26] 2025-10-13 01:14:33,258 | INFO     | process IDs to be killed: [1941705] (in reverse order)
[2025-10-12 21:15:26] 2025-10-13 01:14:33,421 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:15:26] 2025-10-13 01:14:33,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:15:26] 2025-10-13 01:14:33,448 | INFO     | did not find any defunct processes belonging to 1941705
[2025-10-12 21:15:26] 2025-10-13 01:14:33,487 | INFO     | did not find any defunct processes belonging to 1941705
[2025-10-12 21:15:26] 2025-10-13 01:14:33,487 | INFO     | ready for new job
[2025-10-12 21:15:26] 2025-10-13 01:14:33,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:15:26] 2025-10-13 01:14:33,490 | INFO     | ***************************************
[2025-10-12 21:15:26] 2025-10-13 01:14:33,491 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:15:26] 2025-10-13 01:14:33,491 | INFO     | ***************************************
[2025-10-12 21:15:26] 2025-10-13 01:14:33,491 | INFO     | 
[2025-10-12 21:15:26] 2025-10-13 01:14:33,520 | INFO     | architecture information:
[2025-10-12 21:15:26] 2025-10-13 01:14:33,520 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:15:26] 2025-10-13 01:14:33,552 | INFO     | cat /etc/os-release:
[2025-10-12 21:15:26] NAME="CentOS Linux"
[2025-10-12 21:15:26] VERSION="7 (Core)"
[2025-10-12 21:15:26] ID="centos"
[2025-10-12 21:15:26] ID_LIKE="rhel fedora"
[2025-10-12 21:15:26] VERSION_ID="7"
[2025-10-12 21:15:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:15:26] ANSI_COLOR="0;31"
[2025-10-12 21:15:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:15:26] HOME_URL="https://www.centos.org/"
[2025-10-12 21:15:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:15:26] 
[2025-10-12 21:15:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:15:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:15:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:15:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:15:26] 
[2025-10-12 21:15:26] 2025-10-13 01:14:33,552 | INFO     | ***************************************
[2025-10-12 21:15:26] 2025-10-13 01:14:34,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 21:15:26] 2025-10-13 01:14:34,226 | INFO     | sufficient remaining disk space (75143053312 B)
[2025-10-12 21:15:26] 2025-10-13 01:14:34,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:15:26] 2025-10-13 01:14:34,231 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:15:26] 2025-10-13 01:14:34,232 | INFO     | update_server=False
[2025-10-12 21:15:26] 2025-10-13 01:14:34,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:15:26] 2025-10-13 01:14:34,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:15:26] 2025-10-13 01:14:34,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:15:26] 2025-10-13 01:14:34,233 | INFO     | aborting loop
[2025-10-12 21:15:26] 2025-10-13 01:14:34,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:15:26] 2025-10-13 01:14:34,950 | INFO     | all data control threads have been joined
[2025-10-12 21:15:26] 2025-10-13 01:14:34,977 | INFO     | all payload control threads have been joined
[2025-10-12 21:15:26] 2025-10-13 01:14:35,238 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:35,239 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:35,240 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:35,281 | INFO     | all job control threads have been joined
[2025-10-12 21:15:26] 2025-10-13 01:14:35,327 | INFO     | [job] validate thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:35,404 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:35,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:35,875 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:35,956 | INFO     | [data] control thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:35,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:15:26] 2025-10-13 01:14:35,983 | INFO     | [payload] control thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:36,239 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:36,287 | INFO     | [job] control thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:36,547 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:36,659 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:36,750 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:36,964 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:38,879 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:15:26] 2025-10-13 01:14:41,564 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:15:26] 2025-10-13 01:14:43,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661767046976)>', '<ExcThread(monitor, started 139661011818240)>']
[2025-10-12 21:15:26] 2025-10-13 01:14:48,522 | INFO     | all workflow threads have been joined
[2025-10-12 21:15:26] 2025-10-13 01:14:48,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:15:26] 2025-10-13 01:14:48,523 | INFO     | traces error code: 0
[2025-10-12 21:15:26] 2025-10-13 01:14:48,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:15:26] 2025-10-13 01:15:04,876 | INFO     | PID=1917415 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:15:26] 2025-10-13 01:15:04,876 | INFO     | .. there are 31 such processes running
[2025-10-12 21:15:26] 2025-10-13 01:15:04,877 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:15:26] 2025-10-13 01:15:04,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:15:26] 2025-10-13 01:15:04,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:15:26] 2025-10-13 01:15:04,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:15:26] 2025-10-13 01:15:04,877 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 21:15:26] 2025-10-13 01:15:04,877 | INFO     | [monitor] control thread has ended
[2025-10-12 21:15:26] 2025-10-13 01:15:05,055 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:15:26] 2025-10-13 01:15:05,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:15:26] 2025-10-13 01:15:05,143 [wrapper] pilotpid: 1917415
[2025-10-12 21:15:26] 2025-10-13 01:15:05,195 [wrapper] Pilot exit status: 0
[2025-10-12 21:15:26] 2025-10-13 01:15:05,358 [wrapper] pandaids: 6839988432
[2025-10-12 21:15:26] 2025-10-13 01:15:05,766 [wrapper] cleanup supervisor_pilot 3362157 1917416
[2025-10-12 21:15:26] 2025-10-13 01:15:05,802 [wrapper] Test setup, not cleaning
[2025-10-12 21:15:26] 2025-10-13 01:15:05,852 [wrapper] apfmon messages muted
[2025-10-12 21:15:26] 2025-10-13 01:15:05,855 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:15:26] 2025-10-13 01:15:05,857 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:15:26]  *** Error codes and diagnostics ***
[2025-10-12 21:15:26]     "exeErrorCode": 0,
[2025-10-12 21:15:26]     "exeErrorDiag": "",
[2025-10-12 21:15:26]     "pilotErrorCode": 0,
[2025-10-12 21:15:26]     "pilotErrorDiag": "",
[2025-10-12 21:15:26]  *** Listing of results directory ***
[2025-10-12 21:15:26] total 408508
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:46 queuedata.json
[2025-10-12 21:15:26] -rwx------. 1 boincer umatlas     36292 Oct 12 08:46 runpilot2-wrapper.sh
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:15:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:03 run_atlas
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:03 job.xml
[2025-10-12 21:15:26] -rw-r--r--. 2 boincer umatlas 220777790 Oct 12 14:03 EVNT.46676267._003810.pool.root.1
[2025-10-12 21:15:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:03 start_atlas.sh
[2025-10-12 21:15:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:03 shared
[2025-10-12 21:15:26] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 14:03 input.tar.gz
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:03 boinc_lockfile
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:03 pandaJob.out
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas    975528 Oct 12 14:04 agis_schedconf.cvmfs.json
[2025-10-12 21:15:26] drwx------. 5 boincer umatlas      4096 Oct 12 14:04 pilot3
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 21:11 init_data.xml
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas 186070822 Oct 12 21:12 HITS.46676269._078525.pool.root.1
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas       531 Oct 12 21:12 boinc_task_state.xml
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas      1043 Oct 12 21:13 memory_monitor_summary.json
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas    610775 Oct 12 21:13 log.46676269._078525.job.log.tgz.1
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas        95 Oct 12 21:14 pilot_heartbeat.json
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas      7829 Oct 12 21:14 heartbeat.json
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas       893 Oct 12 21:15 pilotlog.txt
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas   3173020 Oct 12 21:15 log.46676269._078525.job.log.1
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas       357 Oct 12 21:15 output.list
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:15 runtime_log
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas   3799040 Oct 12 21:15 result.tar.gz
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 21:15 runtime_log.err
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas       657 Oct 12 21:15 rhFKDmLeAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSrjNDmbgQS9m.diag
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas        28 Oct 12 21:15 wrapper_checkpoint.txt
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:15 boinc_mmap_file
[2025-10-12 21:15:26] -rw-r--r--. 1 boincer umatlas     21229 Oct 12 21:15 stderr.txt
[2025-10-12 21:15:26] HITS file was successfully produced:
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas 186070822 Oct 12 21:12 shared/HITS.pool.root.1
[2025-10-12 21:15:26]  *** Contents of shared directory: ***
[2025-10-12 21:15:26] total 401608
[2025-10-12 21:15:26] -rw-r--r--. 2 boincer umatlas 220777790 Oct 12 14:03 ATLAS.root_0
[2025-10-12 21:15:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:03 start_atlas.sh
[2025-10-12 21:15:26] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 14:03 input.tar.gz
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas 186070822 Oct 12 21:12 HITS.pool.root.1
[2025-10-12 21:15:26] -rw-------. 1 boincer umatlas   3799040 Oct 12 21:15 result.tar.gz
21:15:28 (1912228): run_atlas exited; CPU time 41090.103964
21:15:28 (1912228): called boinc_finish(0)

</stderr_txt>
]]>

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