Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:24:15 (88741): wrapper (7.7.26015): starting
14:24:15 (88741): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:24:15] Arguments: --nthreads 8
[2025-10-12 14:24:15] Threads: 8
[2025-10-12 14:24:15] Checking for CVMFS
[2025-10-12 14:24:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:24:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:24:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:24:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:24:17] 2.13.2.0 317867 138353 519356 151631 0 442 38207345 40960000 64781 16776704 0 441158494 99.817 196033703 30619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 14:24:17] CVMFS is ok
[2025-10-12 14:24:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:24:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:24:17] Further information can be found at the LHC@home message board.
[2025-10-12 14:24:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:24:17] Checking for apptainer binary...
[2025-10-12 14:24:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:24:17] Running /usr/bin/apptainer --version
[2025-10-12 14:24:17] apptainer version 1.4.3-1.el9
[2025-10-12 14:24:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:24:18] c8-6-11.aglt2.org
[2025-10-12 14:24:18] apptainer works
[2025-10-12 14:24:18] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:24:18] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:24:18] Starting ATLAS job with PandaID=6839474206
[2025-10-12 14:24:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:59:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:59:00] 2025-10-12 19:57:23,994 | INFO     | time since job start (5501s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:25,434 | INFO     | monitor loop #344: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:25,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:26,001 | INFO     | time since job start (5504s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:27,941 | INFO     | monitor loop #345: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:27,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:28,008 | INFO     | time since job start (5506s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:30,020 | INFO     | time since job start (5508s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:30,446 | INFO     | monitor loop #346: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:30,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:32,027 | INFO     | time since job start (5510s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:32,960 | INFO     | monitor loop #347: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:32,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:34,033 | INFO     | time since job start (5512s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:35,465 | INFO     | monitor loop #348: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:35,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:36,040 | INFO     | time since job start (5514s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:37,969 | INFO     | monitor loop #349: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:37,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:38,047 | INFO     | time since job start (5516s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:40,056 | INFO     | time since job start (5518s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:40,056 | INFO     | 5523s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 15:59:00] 2025-10-12 19:57:40,476 | INFO     | monitor loop #350: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:40,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:42,091 | INFO     | time since job start (5520s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:42,981 | INFO     | monitor loop #351: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:42,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:44,102 | INFO     | time since job start (5522s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:45,486 | INFO     | monitor loop #352: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:45,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:47,559 | INFO     | PID=103128 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 15:59:00] 2025-10-12 19:57:47,559 | INFO     | .. there are 66 such processes running
[2025-10-12 15:59:00] 2025-10-12 19:57:47,990 | INFO     | monitor loop #353: job 0:6839474206 is in state 'finished'
[2025-10-12 15:59:00] 2025-10-12 19:57:47,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:59:00] 2025-10-12 19:57:48,560 | INFO     | time since job start (5526s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:50,068 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 15:59:00] 2025-10-12 19:57:50,076 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1337421875
[2025-10-12 15:59:00] 2025-10-12 19:57:50,125 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6839474206/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:59:00] 2025-10-12 19:57:50,125 | INFO     | extracted standard info from prmon json
[2025-10-12 15:59:00] 2025-10-12 19:57:50,151 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:59:00] 2025-10-12 19:57:50,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:59:00] 2025-10-12 19:57:50,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:59:00] 2025-10-12 19:57:50,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:59:00] 2025-10-12 19:57:50,152 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:59:00] 2025-10-12 19:57:50,152 | INFO     | sum of square deviations: 164757951.95061755
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | sum of deviations: 4994601006.382719
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | mean x: 1760296430.0246913
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | mean y: 2360000.3086419753
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | -- intersect: -53360638366.94726
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | intersect: -53360638366.94726
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | chi2: 0.2184530214592122
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | -- intersect: -53360638366.94726
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | current memory leak: 30.31 B/s (using 81 data points, chi2=0.22)
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | ..............................
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | . Timing measurements:
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | . get job = 0 s
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | . initial setup = 5 s
[2025-10-12 15:59:00] 2025-10-12 19:57:50,153 | INFO     | . payload setup = 46 s
[2025-10-12 15:59:00] 2025-10-12 19:57:50,154 | INFO     | . stage-in = 0 s
[2025-10-12 15:59:00] 2025-10-12 19:57:50,154 | INFO     | . payload execution = 5375 s
[2025-10-12 15:59:00] 2025-10-12 19:57:50,154 | INFO     | . stage-out = 2 s
[2025-10-12 15:59:00] 2025-10-12 19:57:50,154 | INFO     | . log creation = 0 s
[2025-10-12 15:59:00] 2025-10-12 19:57:50,154 | INFO     | ..............................
[2025-10-12 15:59:00] 2025-10-12 19:57:50,567 | INFO     | time since job start (5528s) is within the limit (172800.0s)
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | 
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | job summary report
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | --------------------------------------------------
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | PanDA job id: 6839474206
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | task id: 46676269
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | errors: (none)
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | pilot state: finished 
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | transexitcode: 0
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | exeerrorcode: 0
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | exeerrordiag: 
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | exitcode: 0
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | exitmsg: OK
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | cpuconsumptiontime: 23559 s
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | nevents: 400
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | neventsw: 0
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | pid: 129879
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | pgrp: 129879
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | corecount: 8
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | event service: False
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | sizes: {0: 2348580, 1: 2348835, 12: 2348835, 23: 2348863, 32: 2349153, 34: 2349181, 5423: 2375818, 5427: 2384900, 5464: 2385038}
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | --------------------------------------------------
[2025-10-12 15:59:00] 2025-10-12 19:57:50,654 | INFO     | 
[2025-10-12 15:59:00] 2025-10-12 19:57:50,655 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:59:00] 2025-10-12 19:57:50,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:59:00] 2025-10-12 19:57:50,698 | INFO     | job 6839474206 has completed (purged errors)
[2025-10-12 15:59:00] 2025-10-12 19:57:50,698 | INFO     | overall cleanup function is called
[2025-10-12 15:59:00] 2025-10-12 19:57:51,718 | INFO     | --- collectZombieJob: --- 10, [129879]
[2025-10-12 15:59:00] 2025-10-12 19:57:51,720 | INFO     | zombie collector waiting for pid 129879
[2025-10-12 15:59:00] 2025-10-12 19:57:51,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:59:00] 2025-10-12 19:57:51,720 | INFO     | collected zombie processes
[2025-10-12 15:59:00] 2025-10-12 19:57:51,720 | INFO     | will attempt to kill all subprocesses of pid=129879
[2025-10-12 15:59:00] 2025-10-12 19:57:52,709 | INFO     | process IDs to be killed: [129879] (in reverse order)
[2025-10-12 15:59:00] 2025-10-12 19:57:53,022 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:59:00] 2025-10-12 19:57:53,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:59:00] 2025-10-12 19:57:53,172 | INFO     | did not find any defunct processes belonging to 129879
[2025-10-12 15:59:00] 2025-10-12 19:57:53,362 | INFO     | did not find any defunct processes belonging to 129879
[2025-10-12 15:59:00] 2025-10-12 19:57:53,362 | INFO     | ready for new job
[2025-10-12 15:59:00] 2025-10-12 19:57:53,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:59:00] 2025-10-12 19:57:53,363 | INFO     | ***************************************
[2025-10-12 15:59:00] 2025-10-12 19:57:53,366 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:59:00] 2025-10-12 19:57:53,366 | INFO     | ***************************************
[2025-10-12 15:59:00] 2025-10-12 19:57:53,366 | INFO     | 
[2025-10-12 15:59:00] 2025-10-12 19:57:53,381 | INFO     | architecture information:
[2025-10-12 15:59:00] 2025-10-12 19:57:53,395 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:59:00] 2025-10-12 19:57:53,459 | INFO     | cat /etc/os-release:
[2025-10-12 15:59:00] NAME="CentOS Linux"
[2025-10-12 15:59:00] VERSION="7 (Core)"
[2025-10-12 15:59:00] ID="centos"
[2025-10-12 15:59:00] ID_LIKE="rhel fedora"
[2025-10-12 15:59:00] VERSION_ID="7"
[2025-10-12 15:59:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:59:00] ANSI_COLOR="0;31"
[2025-10-12 15:59:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:59:00] HOME_URL="https://www.centos.org/"
[2025-10-12 15:59:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:59:00] 
[2025-10-12 15:59:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:59:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:59:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:59:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:59:00] 
[2025-10-12 15:59:00] 2025-10-12 19:57:53,459 | INFO     | ***************************************
[2025-10-12 15:59:00] 2025-10-12 19:57:53,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 15:59:00] 2025-10-12 19:57:54,108 | INFO     | sufficient remaining disk space (169891332096 B)
[2025-10-12 15:59:00] 2025-10-12 19:57:54,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:59:00] 2025-10-12 19:57:54,109 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:59:00] 2025-10-12 19:57:54,109 | INFO     | update_server=False
[2025-10-12 15:59:00] 2025-10-12 19:57:54,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:59:00] 2025-10-12 19:57:54,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:59:00] 2025-10-12 19:57:54,109 | INFO     | aborting loop
[2025-10-12 15:59:00] 2025-10-12 19:57:54,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:59:00] 2025-10-12 19:57:54,592 | INFO     | all data control threads have been joined
[2025-10-12 15:59:00] 2025-10-12 19:57:54,595 | INFO     | all payload control threads have been joined
[2025-10-12 15:59:00] 2025-10-12 19:57:55,115 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:55,115 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:55,424 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:55,459 | INFO     | [job] validate thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:55,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:59:00] 2025-10-12 19:57:55,598 | INFO     | [data] control thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:55,604 | INFO     | [payload] control thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:55,619 | INFO     | all job control threads have been joined
[2025-10-12 15:59:00] 2025-10-12 19:57:55,659 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:55,903 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:56,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:59:00] 2025-10-12 19:57:56,208 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:56,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:56,232 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:56,268 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:56,465 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:56,531 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:57:56,632 | INFO     | [job] control thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:58:00,050 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:59:00] 2025-10-12 19:58:24,611 | INFO     | PID=103128 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 15:59:00] 2025-10-12 19:58:24,611 | INFO     | .. there are 65 such processes running
[2025-10-12 15:59:00] 2025-10-12 19:58:24,611 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:59:00] 2025-10-12 19:58:24,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:59:00] 2025-10-12 19:58:24,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:59:00] 2025-10-12 19:58:51,504 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:59:00] 2025-10-12 19:58:52,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140556527912768)>', '<ExcThread(monitor, started 140556176955136)>']
[2025-10-12 15:59:00] 2025-10-12 19:58:52,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:59:00] 2025-10-12 19:58:52,825 | INFO     | [monitor] control thread has ended
[2025-10-12 15:59:00] 2025-10-12 19:58:57,612 | INFO     | all workflow threads have been joined
[2025-10-12 15:59:00] 2025-10-12 19:58:57,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:59:00] 2025-10-12 19:58:57,612 | INFO     | traces error code: 0
[2025-10-12 15:59:00] 2025-10-12 19:58:57,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:59:00] 2025-10-12 19:58:58,335 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:59:00] 2025-10-12 19:58:58,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:59:00] 2025-10-12 19:58:58,403 [wrapper] pilotpid: 103128
[2025-10-12 15:59:00] 2025-10-12 19:58:58,435 [wrapper] Pilot exit status: 0
[2025-10-12 15:59:00] 2025-10-12 19:58:58,574 [wrapper] pandaids: 6839474206
[2025-10-12 15:59:00] 2025-10-12 19:58:58,957 [wrapper] cleanup supervisor_pilot  701304 103129
[2025-10-12 15:59:00] 2025-10-12 19:58:58,976 [wrapper] Test setup, not cleaning
[2025-10-12 15:59:00] 2025-10-12 19:58:59,032 [wrapper] apfmon messages muted
[2025-10-12 15:59:00] 2025-10-12 19:58:59,065 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:59:00] 2025-10-12 19:58:59,068 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:59:00]  *** Error codes and diagnostics ***
[2025-10-12 15:59:00]     "exeErrorCode": 0,
[2025-10-12 15:59:00]     "exeErrorDiag": "",
[2025-10-12 15:59:00]     "pilotErrorCode": 0,
[2025-10-12 15:59:00]     "pilotErrorDiag": "",
[2025-10-12 15:59:00]  *** Listing of results directory ***
[2025-10-12 15:59:00] total 420856
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 01:03 queuedata.json
[2025-10-12 15:59:00] -rwx------. 1 boincer umatlas     36292 Oct 12 01:04 runpilot2-wrapper.sh
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:59:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:24 run_atlas
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:24 job.xml
[2025-10-12 15:59:00] -rw-r--r--. 2 boincer umatlas 222619693 Oct 12 14:24 EVNT.46676267._001398.pool.root.1
[2025-10-12 15:59:00] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 14:24 input.tar.gz
[2025-10-12 15:59:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:24 shared
[2025-10-12 15:59:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:24 start_atlas.sh
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:24 boinc_lockfile
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:24 pandaJob.out
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas    975528 Oct 12 14:25 agis_schedconf.cvmfs.json
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:59:00] drwx------. 5 boincer umatlas      4096 Oct 12 14:25 pilot3
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas      7163 Oct 12 15:54 init_data.xml
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas 202298648 Oct 12 15:56 HITS.46676269._071572.pool.root.1
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas       530 Oct 12 15:56 boinc_task_state.xml
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas      1049 Oct 12 15:57 memory_monitor_summary.json
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas    348237 Oct 12 15:57 log.46676269._071572.job.log.tgz.1
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas        95 Oct 12 15:57 pilot_heartbeat.json
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas      7804 Oct 12 15:57 heartbeat.json
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas      4824 Oct 12 15:58 pilotlog.txt
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:58 boinc_mmap_file
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas    717273 Oct 12 15:58 log.46676269._071572.job.log.1
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:58 wrapper_checkpoint.txt
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas       357 Oct 12 15:58 output.list
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:59 runtime_log
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas   1085440 Oct 12 15:59 result.tar.gz
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 15:59 runtime_log.err
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas       656 Oct 12 15:59 4PkKDm1Q3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjgiNDmV1yvVn.diag
[2025-10-12 15:59:00] -rw-r--r--. 1 boincer umatlas     22334 Oct 12 15:59 stderr.txt
[2025-10-12 15:59:00] HITS file was successfully produced:
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas 202298648 Oct 12 15:56 shared/HITS.pool.root.1
[2025-10-12 15:59:00]  *** Contents of shared directory: ***
[2025-10-12 15:59:00] total 416604
[2025-10-12 15:59:00] -rw-r--r--. 2 boincer umatlas 222619693 Oct 12 14:24 ATLAS.root_0
[2025-10-12 15:59:00] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 14:24 input.tar.gz
[2025-10-12 15:59:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:24 start_atlas.sh
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas 202298648 Oct 12 15:56 HITS.pool.root.1
[2025-10-12 15:59:00] -rw-------. 1 boincer umatlas   1085440 Oct 12 15:59 result.tar.gz
15:59:02 (88741): run_atlas exited; CPU time 23746.684945
15:59:02 (88741): called boinc_finish(0)

</stderr_txt>
]]>

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