Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:57:47 (30612): wrapper (7.7.26015): starting
13:57:47 (30612): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:57:47] Arguments: --nthreads 8
[2025-10-12 13:57:47] Threads: 8
[2025-10-12 13:57:47] Checking for CVMFS
[2025-10-12 13:57:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:57:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:57:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:57:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:57:48] 2.11.2.0 2822 8828 74020 151630 2 56 14977707 20275200 1 130560 0 5460059 99.989 294848 36846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:57:48] CVMFS is ok
[2025-10-12 13:57:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:57:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:57:48] Further information can be found at the LHC@home message board.
[2025-10-12 13:57:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:57:48] Checking for apptainer binary...
[2025-10-12 13:57:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:57:48] Running /usr/bin/apptainer --version
[2025-10-12 13:57:48] apptainer version 1.3.2-1.el7
[2025-10-12 13:57:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:57:50] c-204-37.aglt2.org
[2025-10-12 13:57:50] apptainer works
[2025-10-12 13:57:50] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:57:50] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:57:50] Starting ATLAS job with PandaID=6839989680
[2025-10-12 13:57:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:06:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:06:25] 2025-10-12 20:05:28,743 | INFO     | mean y: 2502966.104
[2025-10-12 16:06:25] 2025-10-12 20:05:28,743 | INFO     | -- intersect: -55364758394.41481
[2025-10-12 16:06:25] 2025-10-12 20:05:28,743 | INFO     | intersect: -55364758394.41481
[2025-10-12 16:06:25] 2025-10-12 20:05:28,744 | INFO     | chi2: 1.394322085304252
[2025-10-12 16:06:25] 2025-10-12 20:05:28,744 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,744 | INFO     | sum of deviations: 18262493692.5
[2025-10-12 16:06:25] 2025-10-12 20:05:28,745 | INFO     | mean x: 1760295546.5
[2025-10-12 16:06:25] 2025-10-12 20:05:28,745 | INFO     | mean y: 2501249.275
[2025-10-12 16:06:25] 2025-10-12 20:05:28,745 | INFO     | -- intersect: -59997832679.9958
[2025-10-12 16:06:25] 2025-10-12 20:05:28,745 | INFO     | intersect: -59997832679.9958
[2025-10-12 16:06:25] 2025-10-12 20:05:28,745 | INFO     | chi2: 1.3955035253261563
[2025-10-12 16:06:25] 2025-10-12 20:05:28,745 | INFO     | current chi2=1.3955035253261563 (change=-0.08473221749525296 %)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,745 | INFO     | right removable region: 119
[2025-10-12 16:06:25] 2025-10-12 20:05:28,746 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,746 | INFO     | sum of deviations: 1099459028.499999
[2025-10-12 16:06:25] 2025-10-12 20:05:28,746 | INFO     | mean x: 1760295851.5
[2025-10-12 16:06:25] 2025-10-12 20:05:28,747 | INFO     | mean y: 2541419.091666667
[2025-10-12 16:06:25] 2025-10-12 20:05:28,747 | INFO     | -- intersect: -3609666277.8595185
[2025-10-12 16:06:25] 2025-10-12 20:05:28,747 | INFO     | intersect: -3609666277.8595185
[2025-10-12 16:06:25] 2025-10-12 20:05:28,747 | INFO     | chi2: 0.03365490790640815
[2025-10-12 16:06:25] 2025-10-12 20:05:28,747 | INFO     | current chi2=0.03365490790640815 (change=97.58628883088628 %)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,747 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,748 | INFO     | sum of deviations: -1361698181.0000005
[2025-10-12 16:06:25] 2025-10-12 20:05:28,748 | INFO     | mean x: 1760296004.0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,748 | INFO     | mean y: 2547191.6608695653
[2025-10-12 16:06:25] 2025-10-12 20:05:28,748 | INFO     | -- intersect: 5085633168.160242
[2025-10-12 16:06:25] 2025-10-12 20:05:28,748 | INFO     | intersect: 5085633168.160242
[2025-10-12 16:06:25] 2025-10-12 20:05:28,749 | INFO     | chi2: 0.0036854983660153965
[2025-10-12 16:06:25] 2025-10-12 20:05:28,749 | INFO     | current chi2=0.0036854983660153965 (change=89.04915034602234 %)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,749 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 16:06:25] 2025-10-12 20:05:28,750 | INFO     | sum of deviations: -1737475108.5000002
[2025-10-12 16:06:25] 2025-10-12 20:05:28,750 | INFO     | mean x: 1760296156.5
[2025-10-12 16:06:25] 2025-10-12 20:05:28,750 | INFO     | mean y: 2548155.4454545453
[2025-10-12 16:06:25] 2025-10-12 20:05:28,750 | INFO     | -- intersect: 7413666465.804748
[2025-10-12 16:06:25] 2025-10-12 20:05:28,750 | INFO     | intersect: 7413666465.804748
[2025-10-12 16:06:25] 2025-10-12 20:05:28,750 | INFO     | chi2: 0.0027339247483366895
[2025-10-12 16:06:25] 2025-10-12 20:05:28,750 | INFO     | current chi2=0.0027339247483366895 (change=25.819401426231202 %)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,751 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,751 | INFO     | sum of deviations: -1622978444.0000002
[2025-10-12 16:06:25] 2025-10-12 20:05:28,751 | INFO     | mean x: 1760296309.0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,751 | INFO     | mean y: 2547830.1047619046
[2025-10-12 16:06:25] 2025-10-12 20:05:28,752 | INFO     | -- intersect: 7962154410.884197
[2025-10-12 16:06:25] 2025-10-12 20:05:28,752 | INFO     | intersect: 7962154410.884197
[2025-10-12 16:06:25] 2025-10-12 20:05:28,752 | INFO     | chi2: 0.0026918949173666516
[2025-10-12 16:06:25] 2025-10-12 20:05:28,752 | INFO     | current chi2=0.0026918949173666516 (change=1.5373441055979562 %)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,752 | INFO     | left removable region: 40
[2025-10-12 16:06:25] 2025-10-12 20:05:28,752 | INFO     | sum of square deviations: 152858680.0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,753 | INFO     | sum of deviations: -350184469.0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,753 | INFO     | mean x: 1760296736.0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,753 | INFO     | mean y: 2542881.2278481014
[2025-10-12 16:06:25] 2025-10-12 20:05:28,753 | INFO     | -- intersect: 4035212650.315172
[2025-10-12 16:06:25] 2025-10-12 20:05:28,753 | INFO     | intersect: 4035212650.315172
[2025-10-12 16:06:25] 2025-10-12 20:05:28,753 | INFO     | chi2: 0.0019212312917998998
[2025-10-12 16:06:25] 2025-10-12 20:05:28,754 | INFO     | -- intersect: 4035212650.315172
[2025-10-12 16:06:25] 2025-10-12 20:05:28,754 | INFO     | current memory leak: -2.29 B/s (using 79 data points, chi2=0.00)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,754 | INFO     | could have reported an average CPU frequency of 1972 MHz (8 samples)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,754 | INFO     | ..............................
[2025-10-12 16:06:25] 2025-10-12 20:05:28,754 | INFO     | . Timing measurements:
[2025-10-12 16:06:25] 2025-10-12 20:05:28,754 | INFO     | . get job = 0 s
[2025-10-12 16:06:25] 2025-10-12 20:05:28,755 | INFO     | . initial setup = 2 s
[2025-10-12 16:06:25] 2025-10-12 20:05:28,755 | INFO     | . payload setup = 8 s
[2025-10-12 16:06:25] 2025-10-12 20:05:28,755 | INFO     | . stage-in = 0 s
[2025-10-12 16:06:25] 2025-10-12 20:05:28,755 | INFO     | . payload execution = 7604 s
[2025-10-12 16:06:25] 2025-10-12 20:05:28,755 | INFO     | . stage-out = 0 s
[2025-10-12 16:06:25] 2025-10-12 20:05:28,755 | INFO     | . log creation = 0 s
[2025-10-12 16:06:25] 2025-10-12 20:05:28,755 | INFO     | ..............................
[2025-10-12 16:06:25] 2025-10-12 20:05:28,844 | INFO     | 
[2025-10-12 16:06:25] 2025-10-12 20:05:28,844 | INFO     | job summary report
[2025-10-12 16:06:25] 2025-10-12 20:05:28,844 | INFO     | --------------------------------------------------
[2025-10-12 16:06:25] 2025-10-12 20:05:28,844 | INFO     | PanDA job id: 6839989680
[2025-10-12 16:06:25] 2025-10-12 20:05:28,845 | INFO     | task id: 46676269
[2025-10-12 16:06:25] 2025-10-12 20:05:28,845 | INFO     | errors: (none)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,845 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:06:25] 2025-10-12 20:05:28,845 | INFO     | pilot state: finished 
[2025-10-12 16:06:25] 2025-10-12 20:05:28,845 | INFO     | transexitcode: 0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,846 | INFO     | exeerrorcode: 0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,846 | INFO     | exeerrordiag: 
[2025-10-12 16:06:25] 2025-10-12 20:05:28,846 | INFO     | exitcode: 0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,846 | INFO     | exitmsg: OK
[2025-10-12 16:06:25] 2025-10-12 20:05:28,846 | INFO     | cpuconsumptiontime: 55877 s
[2025-10-12 16:06:25] 2025-10-12 20:05:28,846 | INFO     | nevents: 400
[2025-10-12 16:06:25] 2025-10-12 20:05:28,847 | INFO     | neventsw: 0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,847 | INFO     | pid: 8399
[2025-10-12 16:06:25] 2025-10-12 20:05:28,847 | INFO     | pgrp: 8399
[2025-10-12 16:06:25] 2025-10-12 20:05:28,847 | INFO     | corecount: 8
[2025-10-12 16:06:25] 2025-10-12 20:05:28,847 | INFO     | event service: False
[2025-10-12 16:06:25] 2025-10-12 20:05:28,847 | INFO     | sizes: {0: 2348630, 1: 2348885, 7: 2349147, 12: 2349175, 7616: 2376748, 7617: 2385746, 7618: 2385930, 7625: 2386124}
[2025-10-12 16:06:25] 2025-10-12 20:05:28,848 | INFO     | --------------------------------------------------
[2025-10-12 16:06:25] 2025-10-12 20:05:28,848 | INFO     | 
[2025-10-12 16:06:25] 2025-10-12 20:05:28,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:06:25] 2025-10-12 20:05:28,878 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,879 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,882 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,882 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:06:25] 2025-10-12 20:05:28,883 | INFO     | job 6839989680 has completed (purged errors)
[2025-10-12 16:06:25] 2025-10-12 20:05:28,883 | INFO     | overall cleanup function is called
[2025-10-12 16:06:25] 2025-10-12 20:05:29,891 | INFO     | --- collectZombieJob: --- 10, [8399]
[2025-10-12 16:06:25] 2025-10-12 20:05:29,892 | INFO     | zombie collector waiting for pid 8399
[2025-10-12 16:06:25] 2025-10-12 20:05:29,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:06:25] 2025-10-12 20:05:29,899 | INFO     | collected zombie processes
[2025-10-12 16:06:25] 2025-10-12 20:05:29,899 | INFO     | will attempt to kill all subprocesses of pid=8399
[2025-10-12 16:06:25] 2025-10-12 20:05:29,987 | INFO     | process IDs to be killed: [8399] (in reverse order)
[2025-10-12 16:06:25] 2025-10-12 20:05:30,044 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:06:25] 2025-10-12 20:05:30,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:06:25] 2025-10-12 20:05:30,048 | INFO     | did not find any defunct processes belonging to 8399
[2025-10-12 16:06:25] 2025-10-12 20:05:30,051 | INFO     | did not find any defunct processes belonging to 8399
[2025-10-12 16:06:25] 2025-10-12 20:05:30,051 | INFO     | ready for new job
[2025-10-12 16:06:25] 2025-10-12 20:05:30,051 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:06:25] 2025-10-12 20:05:30,053 | INFO     | ***************************************
[2025-10-12 16:06:25] 2025-10-12 20:05:30,053 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:06:25] 2025-10-12 20:05:30,053 | INFO     | ***************************************
[2025-10-12 16:06:25] 2025-10-12 20:05:30,053 | INFO     | 
[2025-10-12 16:06:25] 2025-10-12 20:05:30,054 | INFO     | architecture information:
[2025-10-12 16:06:25] 2025-10-12 20:05:30,054 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:06:25] 2025-10-12 20:05:30,073 | INFO     | cat /etc/os-release:
[2025-10-12 16:06:25] NAME="CentOS Linux"
[2025-10-12 16:06:25] VERSION="7 (Core)"
[2025-10-12 16:06:25] ID="centos"
[2025-10-12 16:06:25] ID_LIKE="rhel fedora"
[2025-10-12 16:06:25] VERSION_ID="7"
[2025-10-12 16:06:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:06:25] ANSI_COLOR="0;31"
[2025-10-12 16:06:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:06:25] HOME_URL="https://www.centos.org/"
[2025-10-12 16:06:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:06:25] 
[2025-10-12 16:06:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:06:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:06:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:06:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:06:25] 
[2025-10-12 16:06:25] 2025-10-12 20:05:30,074 | INFO     | ***************************************
[2025-10-12 16:06:25] 2025-10-12 20:05:30,577 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:06:25] 2025-10-12 20:05:30,597 | INFO     | sufficient remaining disk space (18551406592 B)
[2025-10-12 16:06:25] 2025-10-12 20:05:30,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:06:25] 2025-10-12 20:05:30,598 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:06:25] 2025-10-12 20:05:30,598 | INFO     | update_server=False
[2025-10-12 16:06:25] 2025-10-12 20:05:30,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:06:25] 2025-10-12 20:05:30,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:06:25] 2025-10-12 20:05:30,599 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:06:25] 2025-10-12 20:05:30,599 | INFO     | aborting loop
[2025-10-12 16:06:25] 2025-10-12 20:05:30,727 | INFO     | all data control threads have been joined
[2025-10-12 16:06:25] 2025-10-12 20:05:31,604 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:31,605 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:31,605 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:31,722 | INFO     | all job control threads have been joined
[2025-10-12 16:06:25] 2025-10-12 20:05:31,731 | INFO     | [data] control thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:31,878 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:31,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:06:25] 2025-10-12 20:05:31,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:06:25] 2025-10-12 20:05:32,002 | INFO     | all payload control threads have been joined
[2025-10-12 16:06:25] 2025-10-12 20:05:32,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:32,248 | INFO     | [job] validate thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:32,558 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:32,602 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:32,702 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:32,711 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:32,723 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:32,726 | INFO     | [job] control thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:33,008 | INFO     | [payload] control thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:33,893 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:05:35,975 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:06:25] 2025-10-12 20:06:00,343 | INFO     | PID=1914 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 16:06:25] 2025-10-12 20:06:00,344 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:06:25] 2025-10-12 20:06:00,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:06:25] 2025-10-12 20:06:00,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:06:25] 2025-10-12 20:06:19,044 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:06:25] 2025-10-12 20:06:20,613 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388865247040)>', '<ExcThread(monitor, started 140387867924224)>']
[2025-10-12 16:06:25] 2025-10-12 20:06:21,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:06:25] 2025-10-12 20:06:21,457 | INFO     | [monitor] control thread has ended
[2025-10-12 16:06:25] 2025-10-12 20:06:25,639 | INFO     | all workflow threads have been joined
[2025-10-12 16:06:25] 2025-10-12 20:06:25,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:06:25] 2025-10-12 20:06:25,639 | INFO     | traces error code: 0
[2025-10-12 16:06:25] 2025-10-12 20:06:25,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:06:25] 2025-10-12 20:06:25,755 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:06:25] 2025-10-12 20:06:25,760 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:06:25] 2025-10-12 20:06:25,764 [wrapper] pilotpid: 1914
[2025-10-12 16:06:25] 2025-10-12 20:06:25,769 [wrapper] Pilot exit status: 0
[2025-10-12 16:06:25] 2025-10-12 20:06:25,787 [wrapper] pandaids: 6839989680
[2025-10-12 16:06:25] 2025-10-12 20:06:25,839 [wrapper] cleanup supervisor_pilot 32573 1915
[2025-10-12 16:06:25] 2025-10-12 20:06:25,844 [wrapper] Test setup, not cleaning
[2025-10-12 16:06:25] 2025-10-12 20:06:25,848 [wrapper] apfmon messages muted
[2025-10-12 16:06:25] 2025-10-12 20:06:25,853 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:06:25] 2025-10-12 20:06:25,858 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:06:25]  *** Error codes and diagnostics ***
[2025-10-12 16:06:25]     "exeErrorCode": 0,
[2025-10-12 16:06:25]     "exeErrorDiag": "",
[2025-10-12 16:06:25]     "pilotErrorCode": 0,
[2025-10-12 16:06:25]     "pilotErrorDiag": "",
[2025-10-12 16:06:25]  *** Listing of results directory ***
[2025-10-12 16:06:26] total 413128
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 16:06:26] -rwx------ 1 boincer umatlas     36292 Oct 12 09:03 runpilot2-wrapper.sh
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:03 queuedata.json
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:06:26] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:57 run_atlas
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:57 job.xml
[2025-10-12 16:06:26] -rw-r--r-- 2 boincer umatlas 221739375 Oct 12 13:57 EVNT.46676267._003845.pool.root.1
[2025-10-12 16:06:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:57 start_atlas.sh
[2025-10-12 16:06:26] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:57 shared
[2025-10-12 16:06:26] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 13:57 input.tar.gz
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:57 boinc_lockfile
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:57 pandaJob.out
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas    975528 Oct 12 13:58 agis_schedconf.cvmfs.json
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas   1560580 Oct 12 13:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:06:26] drwx------ 5 boincer umatlas      4096 Oct 12 13:58 pilot3
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 16:04 init_data.xml
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas       529 Oct 12 16:04 boinc_task_state.xml
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas 194533202 Oct 12 16:04 HITS.46676269._079012.pool.root.1
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas      1050 Oct 12 16:05 memory_monitor_summary.json
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas    362522 Oct 12 16:05 log.46676269._079012.job.log.tgz.1
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas      7845 Oct 12 16:05 heartbeat.json
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas        95 Oct 12 16:06 pilot_heartbeat.json
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas        27 Oct 12 16:06 wrapper_checkpoint.txt
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:06 boinc_mmap_file
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas      4745 Oct 12 16:06 pilotlog.txt
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas   1076481 Oct 12 16:06 log.46676269._079012.job.log.1
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas       357 Oct 12 16:06 output.list
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:06 runtime_log
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas   1454080 Oct 12 16:06 result.tar.gz
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas       659 Oct 12 16:06 x0lNDmvuAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBwjNDm2ukmLo.diag
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 16:06 runtime_log.err
[2025-10-12 16:06:26] -rw-r--r-- 1 boincer umatlas     20841 Oct 12 16:06 stderr.txt
[2025-10-12 16:06:26] HITS file was successfully produced:
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas 194533202 Oct 12 16:04 shared/HITS.pool.root.1
[2025-10-12 16:06:26]  *** Contents of shared directory: ***
[2025-10-12 16:06:26] total 408516
[2025-10-12 16:06:26] -rw-r--r-- 2 boincer umatlas 221739375 Oct 12 13:57 ATLAS.root_0
[2025-10-12 16:06:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:57 start_atlas.sh
[2025-10-12 16:06:26] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 13:57 input.tar.gz
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas 194533202 Oct 12 16:04 HITS.pool.root.1
[2025-10-12 16:06:26] -rw------- 1 boincer umatlas   1454080 Oct 12 16:06 result.tar.gz
16:06:27 (30612): run_atlas exited; CPU time 55904.027231
16:06:27 (30612): called boinc_finish(0)

</stderr_txt>
]]>

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