Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:23 (2054612): wrapper (7.7.26015): starting
09:41:23 (2054612): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 09:41:23] Arguments: --nthreads 2
[2025-10-13 09:41:23] Threads: 2
[2025-10-13 09:41:23] Checking for CVMFS
[2025-10-13 09:41:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:41:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:41:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:41:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:41:23] 2.9.2.0 1159703 3857 61804 151653 1 57 29389847 36864001 0 130560 0 2356371 99.989 136996 878 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:41:23] CVMFS is ok
[2025-10-13 09:41:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:41:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:41:23] Further information can be found at the LHC@home message board.
[2025-10-13 09:41:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:41:23] Checking for apptainer binary...
[2025-10-13 09:41:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:41:23] Running /usr/bin/apptainer --version
[2025-10-13 09:41:23] apptainer version 1.4.1-1.1
[2025-10-13 09:41:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:41:23] thA363
[2025-10-13 09:41:23] apptainer works
[2025-10-13 09:41:23] Set ATHENA_PROC_NUMBER=2
[2025-10-13 09:41:23] Set ATHENA_CORE_NUMBER=2
[2025-10-13 09:41:23] Starting ATLAS job with PandaID=6840182361
[2025-10-13 09:41:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:43:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:43:53] 2025-10-13 09:42:54,029 | INFO     | time since job start (7278s) is within the limit (172800.0s)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,439 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 11:43:53] 2025-10-13 09:42:54,440 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3644.4303750000004
[2025-10-13 11:43:53] 2025-10-13 09:42:54,441 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840182361/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,441 | INFO     | extracted standard info from prmon json
[2025-10-13 11:43:53] 2025-10-13 09:42:54,441 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:43:53] 2025-10-13 09:42:54,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:43:53] 2025-10-13 09:42:54,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:43:53] 2025-10-13 09:42:54,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:43:53] 2025-10-13 09:42:54,442 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:43:53] 2025-10-13 09:42:54,442 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,442 | INFO     | sum of deviations: -5733679139.999999
[2025-10-13 11:43:53] 2025-10-13 09:42:54,442 | INFO     | mean x: 1760344923.0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,442 | INFO     | mean y: 2341984.0588235296
[2025-10-13 11:43:53] 2025-10-13 09:42:54,442 | INFO     | -- intersect: 19319468280.544655
[2025-10-13 11:43:53] 2025-10-13 09:42:54,442 | INFO     | intersect: 19319468280.544655
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | chi2: 1.5843197111132294
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | sum of deviations: -5163961740.499997
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | mean x: 1760344770.5
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | mean y: 2343360.8157894737
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | -- intersect: 19791222280.500443
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | intersect: 19791222280.500443
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | chi2: 1.583503279887547
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | current chi2=1.583503279887547 (change=0.05153197425718793 %)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | right removable region: 113
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 11:43:53] 2025-10-13 09:42:54,443 | INFO     | sum of deviations: -20032693196.500004
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | mean x: 1760345075.5
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | mean y: 2375635.5701754387
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | -- intersect: 76769909693.14465
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | intersect: 76769909693.14465
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | chi2: 0.142214364412704
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | current chi2=0.142214364412704 (change=91.02363219903535 %)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | sum of deviations: -16559947183.999998
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | mean x: 1760345228.0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | mean y: 2366466.5045871558
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | -- intersect: 72602167766.29388
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | intersect: 72602167766.29388
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | chi2: 0.13924873325238832
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | current chi2=0.13924873325238832 (change=2.08532462424784 %)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | left removable region: 20
[2025-10-13 11:43:53] 2025-10-13 09:42:54,444 | INFO     | sum of square deviations: 249388862.0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | sum of deviations: -8561078977.0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | mean x: 1760345350.0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | mean y: 2346133.053763441
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | -- intersect: 60431891571.79395
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | intersect: 60431891571.79395
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | chi2: 0.1127973493661992
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | -- intersect: 60431891571.79395
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | current memory leak: -34.33 B/s (using 93 data points, chi2=0.11)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | could have reported an average CPU frequency of 4477 MHz (8 samples)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | ..............................
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | . Timing measurements:
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | . get job = 0 s
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | . initial setup = 1 s
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | . payload setup = 6 s
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | . stage-in = 0 s
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | . payload execution = 7240 s
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | . stage-out = 0 s
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | . log creation = 0 s
[2025-10-13 11:43:53] 2025-10-13 09:42:54,445 | INFO     | ..............................
[2025-10-13 11:43:53] 2025-10-13 09:42:54,917 | INFO     | 
[2025-10-13 11:43:53] 2025-10-13 09:42:54,918 | INFO     | job summary report
[2025-10-13 11:43:53] 2025-10-13 09:42:54,918 | INFO     | --------------------------------------------------
[2025-10-13 11:43:53] 2025-10-13 09:42:54,918 | INFO     | PanDA job id: 6840182361
[2025-10-13 11:43:53] 2025-10-13 09:42:54,918 | INFO     | task id: 46676269
[2025-10-13 11:43:53] 2025-10-13 09:42:54,918 | INFO     | errors: (none)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,918 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:43:53] 2025-10-13 09:42:54,919 | INFO     | pilot state: finished 
[2025-10-13 11:43:53] 2025-10-13 09:42:54,919 | INFO     | transexitcode: 0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,919 | INFO     | exeerrorcode: 0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,919 | INFO     | exeerrordiag: 
[2025-10-13 11:43:53] 2025-10-13 09:42:54,919 | INFO     | exitcode: 0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,919 | INFO     | exitmsg: OK
[2025-10-13 11:43:53] 2025-10-13 09:42:54,919 | INFO     | cpuconsumptiontime: 14124 s
[2025-10-13 11:43:53] 2025-10-13 09:42:54,920 | INFO     | nevents: 400
[2025-10-13 11:43:53] 2025-10-13 09:42:54,920 | INFO     | neventsw: 0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,920 | INFO     | pid: 2064721
[2025-10-13 11:43:53] 2025-10-13 09:42:54,920 | INFO     | pgrp: 2064721
[2025-10-13 11:43:53] 2025-10-13 09:42:54,920 | INFO     | corecount: 2
[2025-10-13 11:43:53] 2025-10-13 09:42:54,920 | INFO     | event service: False
[2025-10-13 11:43:53] 2025-10-13 09:42:54,921 | INFO     | sizes: {0: 2348860, 6: 2349122, 11: 2349150, 7250: 2376621, 7251: 2385680, 7252: 2385680, 7260: 2386002}
[2025-10-13 11:43:53] 2025-10-13 09:42:54,921 | INFO     | --------------------------------------------------
[2025-10-13 11:43:53] 2025-10-13 09:42:54,921 | INFO     | 
[2025-10-13 11:43:53] 2025-10-13 09:42:54,921 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | job 6840182361 has completed (purged errors)
[2025-10-13 11:43:53] 2025-10-13 09:42:54,933 | INFO     | overall cleanup function is called
[2025-10-13 11:43:53] 2025-10-13 09:42:55,940 | INFO     | --- collectZombieJob: --- 10, [2064721]
[2025-10-13 11:43:53] 2025-10-13 09:42:55,940 | INFO     | zombie collector waiting for pid 2064721
[2025-10-13 11:43:53] 2025-10-13 09:42:55,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:43:53] 2025-10-13 09:42:55,941 | INFO     | collected zombie processes
[2025-10-13 11:43:53] 2025-10-13 09:42:55,941 | INFO     | will attempt to kill all subprocesses of pid=2064721
[2025-10-13 11:43:53] 2025-10-13 09:42:55,973 | INFO     | process IDs to be killed: [2064721] (in reverse order)
[2025-10-13 11:43:53] 2025-10-13 09:42:55,994 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:43:53] 2025-10-13 09:42:55,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:43:53] 2025-10-13 09:42:55,994 | INFO     | did not find any defunct processes belonging to 2064721
[2025-10-13 11:43:53] 2025-10-13 09:42:55,995 | INFO     | did not find any defunct processes belonging to 2064721
[2025-10-13 11:43:53] 2025-10-13 09:42:55,995 | INFO     | ready for new job
[2025-10-13 11:43:53] 2025-10-13 09:42:55,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:43:53] 2025-10-13 09:42:55,996 | INFO     | ***************************************
[2025-10-13 11:43:53] 2025-10-13 09:42:55,996 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:43:53] 2025-10-13 09:42:55,996 | INFO     | ***************************************
[2025-10-13 11:43:53] 2025-10-13 09:42:55,996 | INFO     | 
[2025-10-13 11:43:53] 2025-10-13 09:42:55,996 | INFO     | architecture information:
[2025-10-13 11:43:53] 2025-10-13 09:42:55,996 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:43:53] 2025-10-13 09:42:56,004 | INFO     | cat /etc/os-release:
[2025-10-13 11:43:53] NAME="CentOS Linux"
[2025-10-13 11:43:53] VERSION="7 (Core)"
[2025-10-13 11:43:53] ID="centos"
[2025-10-13 11:43:53] ID_LIKE="rhel fedora"
[2025-10-13 11:43:53] VERSION_ID="7"
[2025-10-13 11:43:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:43:53] ANSI_COLOR="0;31"
[2025-10-13 11:43:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:43:53] HOME_URL="https://www.centos.org/"
[2025-10-13 11:43:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:43:53] 
[2025-10-13 11:43:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:43:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:43:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:43:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:43:53] 
[2025-10-13 11:43:53] 2025-10-13 09:42:56,004 | INFO     | ***************************************
[2025-10-13 11:43:53] 2025-10-13 09:42:56,507 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 11:43:53] 2025-10-13 09:42:56,519 | INFO     | sufficient remaining disk space (494184431616 B)
[2025-10-13 11:43:53] 2025-10-13 09:42:56,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:43:53] 2025-10-13 09:42:56,519 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:43:53] 2025-10-13 09:42:56,519 | INFO     | update_server=False
[2025-10-13 11:43:53] 2025-10-13 09:42:56,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:43:53] 2025-10-13 09:42:56,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:43:53] 2025-10-13 09:42:56,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:43:53] 2025-10-13 09:42:56,849 | INFO     | all job control threads have been joined
[2025-10-13 11:43:53] 2025-10-13 09:42:56,965 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 11:43:53] 2025-10-13 09:42:56,965 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 11:43:53] 2025-10-13 09:42:56,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:43:53] 2025-10-13 09:42:56,965 | INFO     | will abort loop
[2025-10-13 11:43:53] 2025-10-13 09:42:57,047 | INFO     | all data control threads have been joined
[2025-10-13 11:43:53] 2025-10-13 09:42:57,249 | INFO     | all payload control threads have been joined
[2025-10-13 11:43:53] 2025-10-13 09:42:57,525 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:57,530 | INFO     | [job] validate thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:57,614 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:57,617 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:57,855 | INFO     | [job] control thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:57,971 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:58,054 | INFO     | [data] control thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:58,190 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:58,255 | INFO     | [payload] control thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:58,473 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:58,526 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:58,888 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:58,973 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:42:59,489 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:43:53] 2025-10-13 09:43:00,495 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:43:00,849 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:43:06,821 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:43:53] 2025-10-13 09:43:07,826 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:43:53] 2025-10-13 09:43:27,142 | INFO     | PID=2058313 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:43:53] 2025-10-13 09:43:27,142 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:43:53] 2025-10-13 09:43:27,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:43:53] 2025-10-13 09:43:27,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:43:53] 2025-10-13 09:43:47,043 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:43:53] 2025-10-13 09:43:48,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577357780800)>', '<ExcThread(monitor, started 140576863270656)>']
[2025-10-13 11:43:53] 2025-10-13 09:43:48,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:43:53] 2025-10-13 09:43:48,255 | INFO     | [monitor] control thread has ended
[2025-10-13 11:43:53] 2025-10-13 09:43:53,214 | INFO     | all workflow threads have been joined
[2025-10-13 11:43:53] 2025-10-13 09:43:53,214 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:43:53] 2025-10-13 09:43:53,214 | INFO     | traces error code: 0
[2025-10-13 11:43:53] 2025-10-13 09:43:53,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:43:53] 2025-10-13 09:43:53,257 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:43:53] 2025-10-13 09:43:53,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:43:53] 2025-10-13 09:43:53,262 [wrapper] pilotpid: 2058313
[2025-10-13 11:43:53] 2025-10-13 09:43:53,264 [wrapper] Pilot exit status: 0
[2025-10-13 11:43:53] 2025-10-13 09:43:53,270 [wrapper] pandaids: 6840182361
[2025-10-13 11:43:53] 2025-10-13 09:43:53,283 [wrapper] cleanup supervisor_pilot 2079209 2058314
[2025-10-13 11:43:53] 2025-10-13 09:43:53,285 [wrapper] Test setup, not cleaning
[2025-10-13 11:43:53] 2025-10-13 09:43:53,287 [wrapper] apfmon messages muted
[2025-10-13 11:43:53] 2025-10-13 09:43:53,289 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:43:53] 2025-10-13 09:43:53,290 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:43:53]  *** Error codes and diagnostics ***
[2025-10-13 11:43:53]     "exeErrorCode": 0,
[2025-10-13 11:43:53]     "exeErrorDiag": "",
[2025-10-13 11:43:53]     "pilotErrorCode": 0,
[2025-10-13 11:43:53]     "pilotErrorDiag": "",
[2025-10-13 11:43:53]  *** Listing of results directory ***
[2025-10-13 11:43:53] total 404024
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-13 11:43:53] -rwx------ 1 boinc boinc     36292 Oct 12 16:46 runpilot2-wrapper.sh
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:46 queuedata.json
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:43:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:41 run_atlas
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:41 job.xml
[2025-10-13 11:43:53] -rw-r--r-- 2 boinc boinc 218134157 Oct 13 09:41 EVNT.46676267._004533.pool.root.1
[2025-10-13 11:43:53] -rw-r--r-- 2 boinc boinc    569678 Oct 13 09:41 input.tar.gz
[2025-10-13 11:43:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:41 start_atlas.sh
[2025-10-13 11:43:53] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:41 shared
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:41 boinc_setup_complete
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc      6205 Oct 13 09:41 init_data.xml
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:41 boinc_lockfile
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:41 pandaJob.out
[2025-10-13 11:43:53] -rw------- 1 boinc boinc    972849 Oct 13 09:41 agis_schedconf.cvmfs.json
[2025-10-13 11:43:53] -rw------- 1 boinc boinc   1560580 Oct 13 09:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:43:53] drwx------ 5 boinc boinc      4096 Oct 13 09:41 pilot3
[2025-10-13 11:43:53] -rw------- 1 boinc boinc 189017304 Oct 13 11:42 HITS.46676269._081208.pool.root.1
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc       529 Oct 13 11:42 boinc_task_state.xml
[2025-10-13 11:43:53] -rw------- 1 boinc boinc      1016 Oct 13 11:42 memory_monitor_summary.json
[2025-10-13 11:43:53] -rw------- 1 boinc boinc    285170 Oct 13 11:42 log.46676269._081208.job.log.tgz.1
[2025-10-13 11:43:53] -rw------- 1 boinc boinc      7756 Oct 13 11:42 heartbeat.json
[2025-10-13 11:43:53] -rw------- 1 boinc boinc        95 Oct 13 11:43 pilot_heartbeat.json
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:43 boinc_mmap_file
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:43 wrapper_checkpoint.txt
[2025-10-13 11:43:53] -rw------- 1 boinc boinc      5010 Oct 13 11:43 pilotlog.txt
[2025-10-13 11:43:53] -rw------- 1 boinc boinc   1051241 Oct 13 11:43 log.46676269._081208.job.log.1
[2025-10-13 11:43:53] -rw------- 1 boinc boinc       357 Oct 13 11:43 output.list
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:43 runtime_log
[2025-10-13 11:43:53] -rw------- 1 boinc boinc   1351680 Oct 13 11:43 result.tar.gz
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc      8777 Oct 13 11:43 runtime_log.err
[2025-10-13 11:43:53] -rw------- 1 boinc boinc       659 Oct 13 11:43 hVgNDmQWCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmp9TMDmHF63Qo.diag
[2025-10-13 11:43:53] -rw-r--r-- 1 boinc boinc     21062 Oct 13 11:43 stderr.txt
[2025-10-13 11:43:53] HITS file was successfully produced:
[2025-10-13 11:43:53] -rw------- 1 boinc boinc 189017304 Oct 13 11:42 shared/HITS.pool.root.1
[2025-10-13 11:43:53]  *** Contents of shared directory: ***
[2025-10-13 11:43:53] total 399516
[2025-10-13 11:43:53] -rw-r--r-- 2 boinc boinc 218134157 Oct 13 09:41 ATLAS.root_0
[2025-10-13 11:43:53] -rw-r--r-- 2 boinc boinc    569678 Oct 13 09:41 input.tar.gz
[2025-10-13 11:43:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:41 start_atlas.sh
[2025-10-13 11:43:53] -rw------- 1 boinc boinc 189017304 Oct 13 11:42 HITS.pool.root.1
[2025-10-13 11:43:53] -rw------- 1 boinc boinc   1351680 Oct 13 11:43 result.tar.gz
11:43:54 (2054612): run_atlas exited; CPU time 14153.569151
11:43:54 (2054612): called boinc_finish(0)

</stderr_txt>
]]>

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