Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:52:19 (3218884): wrapper (7.7.26015): starting
13:52:19 (3218884): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 13:52:19] Arguments: --nthreads 9
[2025-10-12 13:52:19] Threads: 9
[2025-10-12 13:52:19] Checking for CVMFS
[2025-10-12 13:52:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:52:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:52:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:52:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:52:20] 2.13.2.0 128560 116300 193156 151630 0 88 29775178 39288833 5210 16776704 1 73260258 99.570 80444207 35346 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:52:20] CVMFS is ok
[2025-10-12 13:52:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:52:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:52:20] Further information can be found at the LHC@home message board.
[2025-10-12 13:52:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:52:20] Checking for apptainer binary...
[2025-10-12 13:52:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:52:20] Running /usr/bin/apptainer --version
[2025-10-12 13:52:20] apptainer version 1.4.3-1.el9
[2025-10-12 13:52:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:52:20] c-211-5.aglt2.org
[2025-10-12 13:52:20] apptainer works
[2025-10-12 13:52:20] Set ATHENA_PROC_NUMBER=9
[2025-10-12 13:52:20] Set ATHENA_CORE_NUMBER=9
[2025-10-12 13:52:20] Starting ATLAS job with PandaID=6840182058
[2025-10-12 13:52:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:54:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:54:08] 2025-10-12 19:52:59,046 | INFO     | -- intersect: -67270171989.408615
[2025-10-12 15:54:08] 2025-10-12 19:52:59,047 | INFO     | intersect: -67270171989.408615
[2025-10-12 15:54:08] 2025-10-12 19:52:59,047 | INFO     | chi2: 1.4138297575883196
[2025-10-12 15:54:08] 2025-10-12 19:52:59,047 | INFO     | sum of square deviations: 447377904.9911509
[2025-10-12 15:54:08] 2025-10-12 19:52:59,047 | INFO     | sum of deviations: 18427108500.256645
[2025-10-12 15:54:08] 2025-10-12 19:52:59,047 | INFO     | mean x: 1760294996.0088496
[2025-10-12 15:54:08] 2025-10-12 19:52:59,047 | INFO     | mean y: 2525155.743362832
[2025-10-12 15:54:08] 2025-10-12 19:52:59,047 | INFO     | -- intersect: -72502501404.64413
[2025-10-12 15:54:08] 2025-10-12 19:52:59,047 | INFO     | intersect: -72502501404.64413
[2025-10-12 15:54:08] 2025-10-12 19:52:59,048 | INFO     | chi2: 1.4158407599758303
[2025-10-12 15:54:08] 2025-10-12 19:52:59,048 | INFO     | current chi2=1.4158407599758303 (change=-0.142237944612295 %)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,048 | INFO     | right removable region: 112
[2025-10-12 15:54:08] 2025-10-12 19:52:59,048 | INFO     | sum of square deviations: 447377294.9911509
[2025-10-12 15:54:08] 2025-10-12 19:52:59,048 | INFO     | sum of deviations: 1585473320.840708
[2025-10-12 15:54:08] 2025-10-12 19:52:59,048 | INFO     | mean x: 1760295301.0088496
[2025-10-12 15:54:08] 2025-10-12 19:52:59,048 | INFO     | mean y: 2570844.1592920353
[2025-10-12 15:54:08] 2025-10-12 19:52:59,049 | INFO     | -- intersect: -6235790529.557714
[2025-10-12 15:54:08] 2025-10-12 19:52:59,049 | INFO     | intersect: -6235790529.557714
[2025-10-12 15:54:08] 2025-10-12 19:52:59,049 | INFO     | chi2: 0.026475214299242406
[2025-10-12 15:54:08] 2025-10-12 19:52:59,049 | INFO     | current chi2=0.026475214299242406 (change=98.1274114399457 %)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,049 | INFO     | sum of square deviations: 390575924.99074095
[2025-10-12 15:54:08] 2025-10-12 19:52:59,049 | INFO     | sum of deviations: 2356688175.7129626
[2025-10-12 15:54:08] 2025-10-12 19:52:59,049 | INFO     | mean x: 1760295453.5092592
[2025-10-12 15:54:08] 2025-10-12 19:52:59,049 | INFO     | mean y: 2568649.787037037
[2025-10-12 15:54:08] 2025-10-12 19:52:59,049 | INFO     | -- intersect: -10618842491.068361
[2025-10-12 15:54:08] 2025-10-12 19:52:59,050 | INFO     | intersect: -10618842491.068361
[2025-10-12 15:54:08] 2025-10-12 19:52:59,050 | INFO     | chi2: 0.00953748270748847
[2025-10-12 15:54:08] 2025-10-12 19:52:59,050 | INFO     | current chi2=0.00953748270748847 (change=63.97580544697843 %)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,050 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 15:54:08] 2025-10-12 19:52:59,050 | INFO     | sum of deviations: 2912514296.0000005
[2025-10-12 15:54:08] 2025-10-12 19:52:59,050 | INFO     | mean x: 1760295606.0
[2025-10-12 15:54:08] 2025-10-12 19:52:59,050 | INFO     | mean y: 2567113.514563107
[2025-10-12 15:54:08] 2025-10-12 19:52:59,050 | INFO     | -- intersect: -15129717843.50125
[2025-10-12 15:54:08] 2025-10-12 19:52:59,050 | INFO     | intersect: -15129717843.50125
[2025-10-12 15:54:08] 2025-10-12 19:52:59,051 | INFO     | chi2: 0.0004389077134845022
[2025-10-12 15:54:08] 2025-10-12 19:52:59,051 | INFO     | current chi2=0.0004389077134845022 (change=95.39807591850322 %)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,051 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 15:54:08] 2025-10-12 19:52:59,051 | INFO     | sum of deviations: 2356287504.0
[2025-10-12 15:54:08] 2025-10-12 19:52:59,051 | INFO     | mean x: 1760295758.5
[2025-10-12 15:54:08] 2025-10-12 19:52:59,051 | INFO     | mean y: 2568914.8163265307
[2025-10-12 15:54:08] 2025-10-12 19:52:59,051 | INFO     | -- intersect: -14210978875.579792
[2025-10-12 15:54:08] 2025-10-12 19:52:59,051 | INFO     | intersect: -14210978875.579792
[2025-10-12 15:54:08] 2025-10-12 19:52:59,051 | INFO     | chi2: 0.0003413316499384874
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | current chi2=0.0003413316499384874 (change=22.231567263048387 %)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | left removable region: 40
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | sum of square deviations: 115715658.0
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | sum of deviations: 1124885475.5
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | mean x: 1760296185.5
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | mean y: 2572333.597222222
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | -- intersect: -17109473225.93288
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | intersect: -17109473225.93288
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | chi2: 0.00023231273736790508
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | -- intersect: -17109473225.93288
[2025-10-12 15:54:08] 2025-10-12 19:52:59,052 | INFO     | current memory leak: 9.72 B/s (using 72 data points, chi2=0.00)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | could have reported an average CPU frequency of 2603 MHz (7 samples)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | ..............................
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | . Timing measurements:
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | . get job = 0 s
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | . initial setup = 2 s
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | . payload setup = 5 s
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | . stage-in = 0 s
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | . payload execution = 7194 s
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | . stage-out = 1 s
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | . log creation = 0 s
[2025-10-12 15:54:08] 2025-10-12 19:52:59,053 | INFO     | ..............................
[2025-10-12 15:54:08] 2025-10-12 19:52:59,548 | INFO     | 
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | job summary report
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | --------------------------------------------------
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | PanDA job id: 6840182058
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | task id: 46676269
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | errors: (none)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | pilot state: finished 
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | transexitcode: 0
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | exeerrorcode: 0
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | exeerrordiag: 
[2025-10-12 15:54:08] 2025-10-12 19:52:59,549 | INFO     | exitcode: 0
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | exitmsg: OK
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | cpuconsumptiontime: 48640 s
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | nevents: 400
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | neventsw: 0
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | pid: 3234748
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | pgrp: 3234748
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | corecount: 9
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | event service: False
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | sizes: {0: 2348856, 5: 2349118, 11: 2349174, 7204: 2376565, 7206: 2385619, 7211: 2385785}
[2025-10-12 15:54:08] 2025-10-12 19:52:59,550 | INFO     | --------------------------------------------------
[2025-10-12 15:54:08] 2025-10-12 19:52:59,551 | INFO     | 
[2025-10-12 15:54:08] 2025-10-12 19:52:59,551 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 15:54:08] 2025-10-12 19:52:59,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:54:08] 2025-10-12 19:52:59,575 | INFO     | job 6840182058 has completed (purged errors)
[2025-10-12 15:54:08] 2025-10-12 19:52:59,575 | INFO     | overall cleanup function is called
[2025-10-12 15:54:08] 2025-10-12 19:53:00,579 | INFO     | --- collectZombieJob: --- 10, [3234748]
[2025-10-12 15:54:08] 2025-10-12 19:53:00,580 | INFO     | zombie collector waiting for pid 3234748
[2025-10-12 15:54:08] 2025-10-12 19:53:00,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:54:08] 2025-10-12 19:53:00,580 | INFO     | collected zombie processes
[2025-10-12 15:54:08] 2025-10-12 19:53:00,580 | INFO     | will attempt to kill all subprocesses of pid=3234748
[2025-10-12 15:54:08] 2025-10-12 19:53:00,776 | INFO     | process IDs to be killed: [3234748] (in reverse order)
[2025-10-12 15:54:08] 2025-10-12 19:53:00,820 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:54:08] 2025-10-12 19:53:00,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:54:08] 2025-10-12 19:53:00,830 | INFO     | did not find any defunct processes belonging to 3234748
[2025-10-12 15:54:08] 2025-10-12 19:53:00,840 | INFO     | did not find any defunct processes belonging to 3234748
[2025-10-12 15:54:08] 2025-10-12 19:53:00,840 | INFO     | ready for new job
[2025-10-12 15:54:08] 2025-10-12 19:53:00,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:54:08] 2025-10-12 19:53:00,843 | INFO     | ***************************************
[2025-10-12 15:54:08] 2025-10-12 19:53:00,843 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:54:08] 2025-10-12 19:53:00,843 | INFO     | ***************************************
[2025-10-12 15:54:08] 2025-10-12 19:53:00,843 | INFO     | 
[2025-10-12 15:54:08] 2025-10-12 19:53:00,845 | INFO     | architecture information:
[2025-10-12 15:54:08] 2025-10-12 19:53:00,846 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:54:08] 2025-10-12 19:53:00,862 | INFO     | cat /etc/os-release:
[2025-10-12 15:54:08] NAME="CentOS Linux"
[2025-10-12 15:54:08] VERSION="7 (Core)"
[2025-10-12 15:54:08] ID="centos"
[2025-10-12 15:54:08] ID_LIKE="rhel fedora"
[2025-10-12 15:54:08] VERSION_ID="7"
[2025-10-12 15:54:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:54:08] ANSI_COLOR="0;31"
[2025-10-12 15:54:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:54:08] HOME_URL="https://www.centos.org/"
[2025-10-12 15:54:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:54:08] 
[2025-10-12 15:54:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:54:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:54:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:54:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:54:08] 
[2025-10-12 15:54:08] 2025-10-12 19:53:00,862 | INFO     | ***************************************
[2025-10-12 15:54:08] 2025-10-12 19:53:01,364 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 15:54:08] 2025-10-12 19:53:01,382 | INFO     | sufficient remaining disk space (52339671040 B)
[2025-10-12 15:54:08] 2025-10-12 19:53:01,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:54:08] 2025-10-12 19:53:01,383 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:54:08] 2025-10-12 19:53:01,383 | INFO     | update_server=False
[2025-10-12 15:54:08] 2025-10-12 19:53:01,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:54:08] 2025-10-12 19:53:01,383 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:54:08] 2025-10-12 19:53:01,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:54:08] 2025-10-12 19:53:01,384 | INFO     | aborting loop
[2025-10-12 15:54:08] 2025-10-12 19:53:01,513 | INFO     | all job control threads have been joined
[2025-10-12 15:54:08] 2025-10-12 19:53:01,575 | INFO     | all payload control threads have been joined
[2025-10-12 15:54:08] 2025-10-12 19:53:02,205 | INFO     | all data control threads have been joined
[2025-10-12 15:54:08] 2025-10-12 19:53:02,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:54:08] 2025-10-12 19:53:02,388 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:02,389 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:02,519 | INFO     | [job] control thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:02,580 | INFO     | [payload] control thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:02,652 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:02,930 | INFO     | [job] validate thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:03,011 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:03,035 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:03,211 | INFO     | [data] control thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:03,250 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:03,299 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:03,757 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:03,805 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:04,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:54:08] 2025-10-12 19:53:04,353 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:05,127 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:05,389 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:54:08] 2025-10-12 19:53:32,112 | INFO     | PID=3228383 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:54:08] 2025-10-12 19:53:32,112 | INFO     | .. there are 6 such processes running
[2025-10-12 15:54:08] 2025-10-12 19:53:32,112 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:54:08] 2025-10-12 19:53:32,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:54:08] 2025-10-12 19:53:32,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:54:08] 2025-10-12 19:53:44,567 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:54:08] 2025-10-12 19:53:46,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276922136384)>', '<ExcThread(monitor, started 140276408493824)>']
[2025-10-12 15:54:08] 2025-10-12 19:53:47,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:54:08] 2025-10-12 19:53:47,181 | INFO     | [monitor] control thread has ended
[2025-10-12 15:54:08] 2025-10-12 19:53:51,278 | INFO     | all workflow threads have been joined
[2025-10-12 15:54:08] 2025-10-12 19:53:51,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:54:08] 2025-10-12 19:53:51,279 | INFO     | traces error code: 0
[2025-10-12 15:54:08] 2025-10-12 19:53:51,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:54:08] 2025-10-12 19:53:51,440 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:54:08] 2025-10-12 19:53:51,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:54:08] 2025-10-12 19:53:51,446 [wrapper] pilotpid: 3228383
[2025-10-12 15:54:08] 2025-10-12 19:53:51,450 [wrapper] Pilot exit status: 0
[2025-10-12 15:54:08] 2025-10-12 19:53:51,462 [wrapper] pandaids: 6840182058
[2025-10-12 15:54:08] 2025-10-12 19:53:51,509 [wrapper] cleanup supervisor_pilot 3392006 3228384
[2025-10-12 15:54:08] 2025-10-12 19:53:51,513 [wrapper] Test setup, not cleaning
[2025-10-12 15:54:08] 2025-10-12 19:53:51,517 [wrapper] apfmon messages muted
[2025-10-12 15:54:08] 2025-10-12 19:53:51,521 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:54:08] 2025-10-12 19:53:51,524 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:54:08]  *** Error codes and diagnostics ***
[2025-10-12 15:54:08]     "exeErrorCode": 0,
[2025-10-12 15:54:08]     "exeErrorDiag": "",
[2025-10-12 15:54:08]     "pilotErrorCode": 0,
[2025-10-12 15:54:08]     "pilotErrorDiag": "",
[2025-10-12 15:54:08]  *** Listing of results directory ***
[2025-10-12 15:54:08] total 407088
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 15:54:08] -rwx------. 1 boincer umatlas     36292 Oct 12 10:31 runpilot2-wrapper.sh
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:31 queuedata.json
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:54:08] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:52 run_atlas
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:52 job.xml
[2025-10-12 15:54:08] -rw-r--r--. 2 boincer umatlas 220065968 Oct 12 13:52 EVNT.46676267._004339.pool.root.1
[2025-10-12 15:54:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:52 start_atlas.sh
[2025-10-12 15:54:08] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:52 shared
[2025-10-12 15:54:08] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 13:52 input.tar.gz
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:52 boinc_lockfile
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 13:52 pandaJob.out
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas    975528 Oct 12 13:52 agis_schedconf.cvmfs.json
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:54:08] drwx------. 5 boincer umatlas      4096 Oct 12 13:52 pilot3
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 15:50 init_data.xml
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas       529 Oct 12 15:52 boinc_task_state.xml
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas 190082439 Oct 12 15:52 HITS.46676269._080918.pool.root.1
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas        95 Oct 12 15:52 pilot_heartbeat.json
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas      1033 Oct 12 15:52 memory_monitor_summary.json
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas    375955 Oct 12 15:52 log.46676269._080918.job.log.tgz.1
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas      7809 Oct 12 15:52 heartbeat.json
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas      4823 Oct 12 15:53 pilotlog.txt
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas   1023435 Oct 12 15:53 log.46676269._080918.job.log.1
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas       357 Oct 12 15:53 output.list
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:53 runtime_log
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas   1423360 Oct 12 15:53 result.tar.gz
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 15:53 runtime_log.err
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas       651 Oct 12 15:53 mJiKDmeHCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmt6TMDmm4Wqan.diag
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:54 wrapper_checkpoint.txt
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:54 boinc_mmap_file
[2025-10-12 15:54:08] -rw-r--r--. 1 boincer umatlas     20927 Oct 12 15:54 stderr.txt
[2025-10-12 15:54:08] HITS file was successfully produced:
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas 190082439 Oct 12 15:52 shared/HITS.pool.root.1
[2025-10-12 15:54:08]  *** Contents of shared directory: ***
[2025-10-12 15:54:08] total 402516
[2025-10-12 15:54:08] -rw-r--r--. 2 boincer umatlas 220065968 Oct 12 13:52 ATLAS.root_0
[2025-10-12 15:54:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:52 start_atlas.sh
[2025-10-12 15:54:08] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 13:52 input.tar.gz
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas 190082439 Oct 12 15:52 HITS.pool.root.1
[2025-10-12 15:54:08] -rw-------. 1 boincer umatlas   1423360 Oct 12 15:53 result.tar.gz
15:54:10 (3218884): run_atlas exited; CPU time 48819.394787
15:54:10 (3218884): called boinc_finish(0)

</stderr_txt>
]]>

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