Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:48:03 (18183): wrapper (7.7.26015): starting
13:48:03 (18183): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:48:03] Arguments: --nthreads 8
[2025-10-12 13:48:03] Threads: 8
[2025-10-12 13:48:03] Checking for CVMFS
[2025-10-12 13:48:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:48:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:48:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:48:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:48:04] 2.11.2.0 6956 53176 130676 151629 1 188 10295187 18432000 1833 130560 0 48380210 99.973 2395596 39858 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:48:04] CVMFS is ok
[2025-10-12 13:48:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:48:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:48:04] Further information can be found at the LHC@home message board.
[2025-10-12 13:48:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:48:04] Checking for apptainer binary...
[2025-10-12 13:48:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:48:04] Running /usr/bin/apptainer --version
[2025-10-12 13:48:04] apptainer version 1.3.2-1.el7
[2025-10-12 13:48:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:48:04] c-206-16.aglt2.org
[2025-10-12 13:48:04] apptainer works
[2025-10-12 13:48:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:48:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:48:04] Starting ATLAS job with PandaID=6840390580
[2025-10-12 13:48:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:44:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:44:38] 2025-10-12 20:43:48,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:44:38] 2025-10-12 20:43:48,459 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:44:38] 2025-10-12 20:43:48,460 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:44:38] 2025-10-12 20:43:48,462 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:44:38] 2025-10-12 20:43:48,462 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,463 | INFO     | sum of deviations: 21439144607.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,463 | INFO     | mean x: 1760296565.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,464 | INFO     | mean y: 2437517.098265896
[2025-10-12 16:44:38] 2025-10-12 20:43:48,464 | INFO     | -- intersect: -23504230443.411892
[2025-10-12 16:44:38] 2025-10-12 20:43:48,464 | INFO     | intersect: -23504230443.411892
[2025-10-12 16:44:38] 2025-10-12 20:43:48,464 | INFO     | chi2: 2.3201061714715308
[2025-10-12 16:44:38] 2025-10-12 20:43:48,464 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,465 | INFO     | sum of deviations: 32251563119.5
[2025-10-12 16:44:38] 2025-10-12 20:43:48,465 | INFO     | mean x: 1760296412.5
[2025-10-12 16:44:38] 2025-10-12 20:43:48,465 | INFO     | mean y: 2449400.7678571427
[2025-10-12 16:44:38] 2025-10-12 20:43:48,465 | INFO     | -- intersect: -38611630475.57159
[2025-10-12 16:44:38] 2025-10-12 20:43:48,466 | INFO     | intersect: -38611630475.57159
[2025-10-12 16:44:38] 2025-10-12 20:43:48,466 | INFO     | chi2: 1.4926557752279406
[2025-10-12 16:44:38] 2025-10-12 20:43:48,466 | INFO     | current chi2=1.4926557752279406 (change=35.66433322828406 %)
[2025-10-12 16:44:38] 2025-10-12 20:43:48,466 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,467 | INFO     | sum of deviations: 31083747430.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,467 | INFO     | mean x: 1760296260.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,467 | INFO     | mean y: 2448002.263803681
[2025-10-12 16:44:38] 2025-10-12 20:43:48,467 | INFO     | -- intersect: -40744421343.5486
[2025-10-12 16:44:38] 2025-10-12 20:43:48,467 | INFO     | intersect: -40744421343.5486
[2025-10-12 16:44:38] 2025-10-12 20:43:48,468 | INFO     | chi2: 1.4933205163914371
[2025-10-12 16:44:38] 2025-10-12 20:43:48,468 | INFO     | current chi2=1.4933205163914371 (change=-0.044534123307502865 %)
[2025-10-12 16:44:38] 2025-10-12 20:43:48,468 | INFO     | right removable region: 162
[2025-10-12 16:44:38] 2025-10-12 20:43:48,468 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,469 | INFO     | sum of deviations: -6131835899.999999
[2025-10-12 16:44:38] 2025-10-12 20:43:48,469 | INFO     | mean x: 1760296717.5
[2025-10-12 16:44:38] 2025-10-12 20:43:48,469 | INFO     | mean y: 2468259.535714286
[2025-10-12 16:44:38] 2025-10-12 20:43:48,469 | INFO     | -- intersect: 7343980402.034106
[2025-10-12 16:44:38] 2025-10-12 20:43:48,469 | INFO     | intersect: 7343980402.034106
[2025-10-12 16:44:38] 2025-10-12 20:43:48,470 | INFO     | chi2: 0.8809599510159833
[2025-10-12 16:44:38] 2025-10-12 20:43:48,470 | INFO     | current chi2=0.8809599510159833 (change=62.029325991696616 %)
[2025-10-12 16:44:38] 2025-10-12 20:43:48,470 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,471 | INFO     | sum of deviations: -8841876312.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,471 | INFO     | mean x: 1760296870.0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,471 | INFO     | mean y: 2471438.957055215
[2025-10-12 16:44:38] 2025-10-12 20:43:48,471 | INFO     | -- intersect: 11593059237.824377
[2025-10-12 16:44:38] 2025-10-12 20:43:48,471 | INFO     | intersect: 11593059237.824377
[2025-10-12 16:44:38] 2025-10-12 20:43:48,471 | INFO     | chi2: 0.8572838971498352
[2025-10-12 16:44:38] 2025-10-12 20:43:48,471 | INFO     | current chi2=0.8572838971498352 (change=2.6875289664238746 %)
[2025-10-12 16:44:38] 2025-10-12 20:43:48,472 | INFO     | left removable region: 20
[2025-10-12 16:44:38] 2025-10-12 20:43:48,472 | INFO     | sum of square deviations: 887813855.5
[2025-10-12 16:44:38] 2025-10-12 20:43:48,472 | INFO     | sum of deviations: 3086248792.5000005
[2025-10-12 16:44:38] 2025-10-12 20:43:48,473 | INFO     | mean x: 1760296839.5
[2025-10-12 16:44:38] 2025-10-12 20:43:48,473 | INFO     | mean y: 2483076.8661971833
[2025-10-12 16:44:38] 2025-10-12 20:43:48,473 | INFO     | -- intersect: -6116720809.954019
[2025-10-12 16:44:38] 2025-10-12 20:43:48,473 | INFO     | intersect: -6116720809.954019
[2025-10-12 16:44:38] 2025-10-12 20:43:48,473 | INFO     | chi2: 0.00031933605245044246
[2025-10-12 16:44:38] 2025-10-12 20:43:48,473 | INFO     | -- intersect: -6116720809.954019
[2025-10-12 16:44:38] 2025-10-12 20:43:48,473 | INFO     | current memory leak: 3.48 B/s (using 142 data points, chi2=0.00)
[2025-10-12 16:44:38] 2025-10-12 20:43:48,474 | INFO     | could have reported an average CPU frequency of 2559 MHz (9 samples)
[2025-10-12 16:44:38] 2025-10-12 20:43:48,474 | INFO     | ..............................
[2025-10-12 16:44:38] 2025-10-12 20:43:48,474 | INFO     | . Timing measurements:
[2025-10-12 16:44:38] 2025-10-12 20:43:48,474 | INFO     | . get job = 0 s
[2025-10-12 16:44:38] 2025-10-12 20:43:48,474 | INFO     | . initial setup = 2 s
[2025-10-12 16:44:38] 2025-10-12 20:43:48,474 | INFO     | . payload setup = 4 s
[2025-10-12 16:44:38] 2025-10-12 20:43:48,474 | INFO     | . stage-in = 0 s
[2025-10-12 16:44:38] 2025-10-12 20:43:48,475 | INFO     | . payload execution = 10501 s
[2025-10-12 16:44:38] 2025-10-12 20:43:48,475 | INFO     | . stage-out = 1 s
[2025-10-12 16:44:38] 2025-10-12 20:43:48,475 | INFO     | . log creation = 0 s
[2025-10-12 16:44:38] 2025-10-12 20:43:48,475 | INFO     | ..............................
[2025-10-12 16:44:38] 2025-10-12 20:43:48,606 | INFO     | 
[2025-10-12 16:44:38] 2025-10-12 20:43:48,606 | INFO     | job summary report
[2025-10-12 16:44:38] 2025-10-12 20:43:48,606 | INFO     | --------------------------------------------------
[2025-10-12 16:44:38] 2025-10-12 20:43:48,606 | INFO     | PanDA job id: 6840390580
[2025-10-12 16:44:38] 2025-10-12 20:43:48,606 | INFO     | task id: 46676269
[2025-10-12 16:44:38] 2025-10-12 20:43:48,607 | INFO     | errors: (none)
[2025-10-12 16:44:38] 2025-10-12 20:43:48,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:44:38] 2025-10-12 20:43:48,607 | INFO     | pilot state: finished 
[2025-10-12 16:44:38] 2025-10-12 20:43:48,607 | INFO     | transexitcode: 0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,607 | INFO     | exeerrorcode: 0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,607 | INFO     | exeerrordiag: 
[2025-10-12 16:44:38] 2025-10-12 20:43:48,608 | INFO     | exitcode: 0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,608 | INFO     | exitmsg: OK
[2025-10-12 16:44:38] 2025-10-12 20:43:48,608 | INFO     | cpuconsumptiontime: 78038 s
[2025-10-12 16:44:38] 2025-10-12 20:43:48,608 | INFO     | nevents: 400
[2025-10-12 16:44:38] 2025-10-12 20:43:48,608 | INFO     | neventsw: 0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,608 | INFO     | pid: 28319
[2025-10-12 16:44:38] 2025-10-12 20:43:48,609 | INFO     | pgrp: 28319
[2025-10-12 16:44:38] 2025-10-12 20:43:48,609 | INFO     | corecount: 8
[2025-10-12 16:44:38] 2025-10-12 20:43:48,609 | INFO     | event service: False
[2025-10-12 16:44:38] 2025-10-12 20:43:48,609 | INFO     | sizes: {0: 2348027, 1: 2348883, 4: 2349145, 12: 2349173, 10510: 2378030, 10512: 2387028, 10514: 2387212, 10519: 2387470}
[2025-10-12 16:44:38] 2025-10-12 20:43:48,609 | INFO     | --------------------------------------------------
[2025-10-12 16:44:38] 2025-10-12 20:43:48,609 | INFO     | 
[2025-10-12 16:44:38] 2025-10-12 20:43:48,610 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:44:38] 2025-10-12 20:43:48,626 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,626 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,626 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,626 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,628 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:44:38] 2025-10-12 20:43:48,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,628 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:44:38] 2025-10-12 20:43:48,628 | INFO     | job 6840390580 has completed (purged errors)
[2025-10-12 16:44:38] 2025-10-12 20:43:48,629 | INFO     | overall cleanup function is called
[2025-10-12 16:44:38] 2025-10-12 20:43:49,636 | INFO     | --- collectZombieJob: --- 10, [28319]
[2025-10-12 16:44:38] 2025-10-12 20:43:49,636 | INFO     | zombie collector waiting for pid 28319
[2025-10-12 16:44:38] 2025-10-12 20:43:49,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:44:38] 2025-10-12 20:43:49,637 | INFO     | collected zombie processes
[2025-10-12 16:44:38] 2025-10-12 20:43:49,637 | INFO     | will attempt to kill all subprocesses of pid=28319
[2025-10-12 16:44:38] 2025-10-12 20:43:49,809 | INFO     | process IDs to be killed: [28319] (in reverse order)
[2025-10-12 16:44:38] 2025-10-12 20:43:49,865 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:44:38] 2025-10-12 20:43:49,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:44:38] 2025-10-12 20:43:49,870 | INFO     | did not find any defunct processes belonging to 28319
[2025-10-12 16:44:38] 2025-10-12 20:43:49,874 | INFO     | did not find any defunct processes belonging to 28319
[2025-10-12 16:44:38] 2025-10-12 20:43:49,875 | INFO     | ready for new job
[2025-10-12 16:44:38] 2025-10-12 20:43:49,875 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:44:38] 2025-10-12 20:43:49,877 | INFO     | ***************************************
[2025-10-12 16:44:38] 2025-10-12 20:43:49,877 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:44:38] 2025-10-12 20:43:49,877 | INFO     | ***************************************
[2025-10-12 16:44:38] 2025-10-12 20:43:49,877 | INFO     | 
[2025-10-12 16:44:38] 2025-10-12 20:43:49,878 | INFO     | architecture information:
[2025-10-12 16:44:38] 2025-10-12 20:43:49,879 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:44:38] 2025-10-12 20:43:49,891 | INFO     | cat /etc/os-release:
[2025-10-12 16:44:38] NAME="CentOS Linux"
[2025-10-12 16:44:38] VERSION="7 (Core)"
[2025-10-12 16:44:38] ID="centos"
[2025-10-12 16:44:38] ID_LIKE="rhel fedora"
[2025-10-12 16:44:38] VERSION_ID="7"
[2025-10-12 16:44:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:44:38] ANSI_COLOR="0;31"
[2025-10-12 16:44:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:44:38] HOME_URL="https://www.centos.org/"
[2025-10-12 16:44:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:44:38] 
[2025-10-12 16:44:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:44:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:44:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:44:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:44:38] 
[2025-10-12 16:44:38] 2025-10-12 20:43:49,891 | INFO     | ***************************************
[2025-10-12 16:44:38] 2025-10-12 20:43:50,394 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:44:38] 2025-10-12 20:43:50,433 | INFO     | sufficient remaining disk space (28408020992 B)
[2025-10-12 16:44:38] 2025-10-12 20:43:50,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:44:38] 2025-10-12 20:43:50,434 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:44:38] 2025-10-12 20:43:50,434 | INFO     | update_server=False
[2025-10-12 16:44:38] 2025-10-12 20:43:50,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:44:38] 2025-10-12 20:43:50,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:44:38] 2025-10-12 20:43:50,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:44:38] 2025-10-12 20:43:50,483 | INFO     | aborting loop
[2025-10-12 16:44:38] 2025-10-12 20:43:50,847 | INFO     | all payload control threads have been joined
[2025-10-12 16:44:38] 2025-10-12 20:43:51,351 | INFO     | all job control threads have been joined
[2025-10-12 16:44:38] 2025-10-12 20:43:51,405 | INFO     | all data control threads have been joined
[2025-10-12 16:44:38] 2025-10-12 20:43:51,439 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:51,440 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:51,489 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:51,664 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:51,799 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:51,853 | INFO     | [payload] control thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:51,886 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:51,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:44:38] 2025-10-12 20:43:52,022 | INFO     | [job] validate thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:52,350 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:52,357 | INFO     | [job] control thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:52,410 | INFO     | [data] control thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:52,471 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:52,524 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:52,761 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:53,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:44:38] 2025-10-12 20:43:53,939 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:43:57,937 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:44:38] 2025-10-12 20:44:20,999 | INFO     | PID=21881 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 16:44:38] 2025-10-12 20:44:20,999 | INFO     | .. there are 3 such processes running
[2025-10-12 16:44:38] 2025-10-12 20:44:21,000 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:44:38] 2025-10-12 20:44:21,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:44:38] 2025-10-12 20:44:21,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:44:38] 2025-10-12 20:44:31,924 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:44:38] 2025-10-12 20:44:33,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559364814656)>', '<ExcThread(monitor, started 140558701946624)>']
[2025-10-12 16:44:38] 2025-10-12 20:44:33,064 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:44:38] 2025-10-12 20:44:33,064 | INFO     | [monitor] control thread has ended
[2025-10-12 16:44:38] 2025-10-12 20:44:38,007 | INFO     | all workflow threads have been joined
[2025-10-12 16:44:38] 2025-10-12 20:44:38,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:44:38] 2025-10-12 20:44:38,008 | INFO     | traces error code: 0
[2025-10-12 16:44:38] 2025-10-12 20:44:38,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:44:38] 2025-10-12 20:44:38,131 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:44:38] 2025-10-12 20:44:38,133 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:44:38] 2025-10-12 20:44:38,135 [wrapper] pilotpid: 21881
[2025-10-12 16:44:38] 2025-10-12 20:44:38,137 [wrapper] Pilot exit status: 0
[2025-10-12 16:44:38] 2025-10-12 20:44:38,155 [wrapper] pandaids: 6840390580
[2025-10-12 16:44:38] 2025-10-12 20:44:38,195 [wrapper] cleanup supervisor_pilot 19748 21882
[2025-10-12 16:44:38] 2025-10-12 20:44:38,198 [wrapper] Test setup, not cleaning
[2025-10-12 16:44:38] 2025-10-12 20:44:38,201 [wrapper] apfmon messages muted
[2025-10-12 16:44:38] 2025-10-12 20:44:38,203 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:44:38] 2025-10-12 20:44:38,206 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:44:38]  *** Error codes and diagnostics ***
[2025-10-12 16:44:38]     "exeErrorCode": 0,
[2025-10-12 16:44:38]     "exeErrorDiag": "",
[2025-10-12 16:44:38]     "pilotErrorCode": 0,
[2025-10-12 16:44:38]     "pilotErrorDiag": "",
[2025-10-12 16:44:38]  *** Listing of results directory ***
[2025-10-12 16:44:38] total 408468
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:25 queuedata.json
[2025-10-12 16:44:38] -rwx------ 1 boincer umatlas     36292 Oct 12 12:25 runpilot2-wrapper.sh
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:44:38] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:48 run_atlas
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:48 job.xml
[2025-10-12 16:44:38] -rw-r--r-- 2 boincer umatlas 223408436 Oct 12 13:48 EVNT.46676267._004739.pool.root.1
[2025-10-12 16:44:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:48 start_atlas.sh
[2025-10-12 16:44:38] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:48 shared
[2025-10-12 16:44:38] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 13:48 input.tar.gz
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:48 boinc_lockfile
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 13:48 pandaJob.out
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas    975528 Oct 12 13:48 agis_schedconf.cvmfs.json
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas   1560580 Oct 12 13:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:44:38] drwx------ 5 boincer umatlas      4096 Oct 12 13:48 pilot3
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas      5950 Oct 12 16:36 init_data.xml
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas 187181052 Oct 12 16:43 HITS.46676269._083412.pool.root.1
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas       531 Oct 12 16:43 boinc_task_state.xml
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas      1055 Oct 12 16:43 memory_monitor_summary.json
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas    401744 Oct 12 16:43 log.46676269._083412.job.log.tgz.1
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas      7859 Oct 12 16:43 heartbeat.json
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:44 boinc_mmap_file
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas        28 Oct 12 16:44 wrapper_checkpoint.txt
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas        95 Oct 12 16:44 pilot_heartbeat.json
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas      4821 Oct 12 16:44 pilotlog.txt
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas   1485801 Oct 12 16:44 log.46676269._083412.job.log.1
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas       357 Oct 12 16:44 output.list
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:44 runtime_log
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas   1904640 Oct 12 16:44 result.tar.gz
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 16:44 runtime_log.err
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas       662 Oct 12 16:44 NsMKDmV4DS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZdkNDmpxU9rm.diag
[2025-10-12 16:44:38] -rw-r--r-- 1 boincer umatlas     20870 Oct 12 16:44 stderr.txt
[2025-10-12 16:44:38] HITS file was successfully produced:
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas 187181052 Oct 12 16:43 shared/HITS.pool.root.1
[2025-10-12 16:44:38]  *** Contents of shared directory: ***
[2025-10-12 16:44:38] total 403416
[2025-10-12 16:44:38] -rw-r--r-- 2 boincer umatlas 223408436 Oct 12 13:48 ATLAS.root_0
[2025-10-12 16:44:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:48 start_atlas.sh
[2025-10-12 16:44:38] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 13:48 input.tar.gz
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas 187181052 Oct 12 16:43 HITS.pool.root.1
[2025-10-12 16:44:38] -rw------- 1 boincer umatlas   1904640 Oct 12 16:44 result.tar.gz
16:44:40 (18183): run_atlas exited; CPU time 78174.108616
16:44:40 (18183): called boinc_finish(0)

</stderr_txt>
]]>

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